RNA–Protein interactions for RNA: ENST00000629667.2

PDLIM3-213, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 1,016 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-213ENST00000629667 MTMR14Q8NCE2 650 aa19.96■□□□□ 0.79
PDLIM3-213ENST00000629667 DNAAF4Q8WXU2 420 aa19.96■□□□□ 0.79
PDLIM3-213ENST00000629667 TRIM17Q9Y577 477 aa19.96■□□□□ 0.79
PDLIM3-213ENST00000629667 F8W031 263 aaPredicted RBP19.95■□□□□ 0.78
PDLIM3-213ENST00000629667 SNAP23O00161 211 aa19.95■□□□□ 0.78
PDLIM3-213ENST00000629667 TAF5LO75529 589 aa19.95■□□□□ 0.78
PDLIM3-213ENST00000629667 SUPT20HL1Q3ZLR7 823 aa19.95■□□□□ 0.78
PDLIM3-213ENST00000629667 CERS5Q8N5B7 392 aa19.95■□□□□ 0.78
PDLIM3-213ENST00000629667 LINS1Q8NG48 757 aa19.95■□□□□ 0.78
PDLIM3-213ENST00000629667 WNK4Q96J92 1243 aa19.95■□□□□ 0.78
PDLIM3-213ENST00000629667 CLRN2A0PK11 232 aa19.94■□□□□ 0.78
PDLIM3-213ENST00000629667 CCDC27Q2M243 656 aa19.94■□□□□ 0.78
PDLIM3-213ENST00000629667 CFAP100Q494V2 611 aa19.94■□□□□ 0.78
PDLIM3-213ENST00000629667 ZNF804AQ7Z570 1209 aa19.94■□□□□ 0.78
PDLIM3-213ENST00000629667 HELBQ8NG08 1087 aaPredicted RBP19.94■□□□□ 0.78
PDLIM3-213ENST00000629667 CLMNQ96JQ2 1002 aa19.94■□□□□ 0.78
PDLIM3-213ENST00000629667 PCDHAC2Q9Y5I4 1007 aa19.94■□□□□ 0.78
PDLIM3-213ENST00000629667 SSC5DA1L4H1 1573 aa19.94■□□□□ 0.78
PDLIM3-213ENST00000629667 UNCXA6NJT0 531 aa19.93■□□□□ 0.78
PDLIM3-213ENST00000629667 IFIT5Q13325 482 aaKnown RBP19.93■□□□□ 0.78
PDLIM3-213ENST00000629667 C15orf52Q6ZUT6 534 aaKnown RBP19.93■□□□□ 0.78
PDLIM3-213ENST00000629667 OTOP1Q7RTM1 612 aa19.93■□□□□ 0.78
PDLIM3-213ENST00000629667 WWC1Q8IX03 1113 aa19.93■□□□□ 0.78
PDLIM3-213ENST00000629667 VEZTQ9HBM0 779 aa19.93■□□□□ 0.78
PDLIM3-213ENST00000629667 CHMP3Q9Y3E7 222 aa19.93■□□□□ 0.78
PDLIM3-213ENST00000629667 IRS2Q9Y4H2 1338 aa19.93■□□□□ 0.78
PDLIM3-213ENST00000629667 SPDYE2BA6NHP3 402 aa19.92■□□□□ 0.78
PDLIM3-213ENST00000629667 IGF2BP3O00425 579 aaKnown RBP eCLIP19.92■□□□□ 0.78
PDLIM3-213ENST00000629667 SPDYE6P0CI01 402 aa19.92■□□□□ 0.78
PDLIM3-213ENST00000629667 IL1R1P14778 569 aa19.92■□□□□ 0.78
PDLIM3-213ENST00000629667 IREB2P48200 963 aaKnown RBP19.92■□□□□ 0.78
PDLIM3-213ENST00000629667 RBM5P52756 815 aaKnown RBP eCLIP19.92■□□□□ 0.78
PDLIM3-213ENST00000629667 INTS3Q68E01 1043 aaKnown RBP19.92■□□□□ 0.78
PDLIM3-213ENST00000629667 OTUD7BQ6GQQ9 843 aa19.92■□□□□ 0.78
PDLIM3-213ENST00000629667 PRMT6Q96LA8 375 aaPredicted RBP19.92■□□□□ 0.78
PDLIM3-213ENST00000629667 FKBP1AP62942 108 aaKnown RBP19.91■□□□□ 0.78
PDLIM3-213ENST00000629667 NBPF12Q5TAG4 269 aaPredicted RBP19.91■□□□□ 0.78
PDLIM3-213ENST00000629667 GCC1Q96CN9 775 aa19.91■□□□□ 0.78
PDLIM3-213ENST00000629667 ERO1AQ96HE7 468 aa19.91■□□□□ 0.78
PDLIM3-213ENST00000629667 CENPFP49454 3210 aa19.91■□□□□ 0.78
PDLIM3-213ENST00000629667 JAG2Q9Y219 1238 aa19.9■□□□□ 0.78
PDLIM3-213ENST00000629667 IL16Q14005 1332 aa19.9■□□□□ 0.78
PDLIM3-213ENST00000629667 HTTP42858 3142 aa19.89■□□□□ 0.78
PDLIM3-213ENST00000629667 FOXO4P98177 505 aa19.89■□□□□ 0.77
PDLIM3-213ENST00000629667 RASA3Q14644 834 aa19.89■□□□□ 0.77
PDLIM3-213ENST00000629667 ANKRD13AQ8IZ07 590 aa19.89■□□□□ 0.77
PDLIM3-213ENST00000629667 RBBP6Q7Z6E9 1792 aaKnown RBP19.88■□□□□ 0.77
PDLIM3-213ENST00000629667 MKI67P46013 3256 aaKnown RBP19.88■□□□□ 0.77
PDLIM3-213ENST00000629667 POTEFA5A3E0 1075 aa19.88■□□□□ 0.77
PDLIM3-213ENST00000629667 PLIN1O60240 522 aa19.88■□□□□ 0.77
PDLIM3-213ENST00000629667 USP2O75604 605 aaPredicted RBP19.88■□□□□ 0.77
PDLIM3-213ENST00000629667 CRHR2Q13324 411 aa19.88■□□□□ 0.77
PDLIM3-213ENST00000629667 CCDC57Q2TAC2 916 aa19.88■□□□□ 0.77
PDLIM3-213ENST00000629667 TAF7LQ5H9L4 462 aa19.88■□□□□ 0.77
PDLIM3-213ENST00000629667 CD99L2Q8TCZ2 262 aa19.88■□□□□ 0.77
PDLIM3-213ENST00000629667 PTPN22Q9Y2R2 807 aa19.88■□□□□ 0.77
PDLIM3-213ENST00000629667 OTOFQ9HC10 1997 aa19.88■□□□□ 0.77
PDLIM3-213ENST00000629667 TNFAIP1Q13829 316 aa19.87■□□□□ 0.77
PDLIM3-213ENST00000629667 LMBR1LQ6UX01 489 aa19.87■□□□□ 0.77
PDLIM3-213ENST00000629667 LDHAL6AQ6ZMR3 332 aa19.87■□□□□ 0.77
PDLIM3-213ENST00000629667 CNNM1Q9NRU3 951 aa19.87■□□□□ 0.77
PDLIM3-213ENST00000629667 AOX1Q06278 1338 aa19.86■□□□□ 0.77
PDLIM3-213ENST00000629667 FANCIQ9NVI1 1328 aa19.86■□□□□ 0.77
PDLIM3-213ENST00000629667 GJA5P36382 358 aa19.86■□□□□ 0.77
PDLIM3-213ENST00000629667 SP3Q02447 781 aa19.86■□□□□ 0.77
PDLIM3-213ENST00000629667 ZNF594Q96JF6 807 aaPredicted RBP19.86■□□□□ 0.77
PDLIM3-213ENST00000629667 EFCC1Q9HA90 598 aa19.86■□□□□ 0.77
PDLIM3-213ENST00000629667 F6X3S4 739 aa19.85■□□□□ 0.77
PDLIM3-213ENST00000629667 VAMP4O75379 141 aa19.85■□□□□ 0.77
PDLIM3-213ENST00000629667 CCDC184Q52MB2 194 aa19.85■□□□□ 0.77
PDLIM3-213ENST00000629667 PTPN18Q99952 460 aa19.85■□□□□ 0.77
PDLIM3-213ENST00000629667 ELP3Q9H9T3 547 aa19.85■□□□□ 0.77
PDLIM3-213ENST00000629667 FAM205AQ6ZU69 1335 aa19.84■□□□□ 0.77
PDLIM3-213ENST00000629667 TESPA1A2RU30 521 aaPredicted RBP19.84■□□□□ 0.77
PDLIM3-213ENST00000629667 MFSD14BQ5SR56 506 aa19.84■□□□□ 0.77
PDLIM3-213ENST00000629667 BEND3Q5T5X7 828 aa19.84■□□□□ 0.77
PDLIM3-213ENST00000629667 OPTNQ96CV9 577 aa19.84■□□□□ 0.77
PDLIM3-213ENST00000629667 TTF2Q9UNY4 1162 aaKnown RBP19.84■□□□□ 0.77
PDLIM3-213ENST00000629667 BRCA2P51587 3418 aa19.83■□□□□ 0.77
PDLIM3-213ENST00000629667 ARAP2Q8WZ64 1704 aa19.83■□□□□ 0.77
PDLIM3-213ENST00000629667 GRM8O00222 908 aa19.83■□□□□ 0.77
PDLIM3-213ENST00000629667 SPDYE2Q495Y8 402 aa19.83■□□□□ 0.77
PDLIM3-213ENST00000629667 NCBP3Q53F19 620 aaKnown RBP19.83■□□□□ 0.77
PDLIM3-213ENST00000629667 EPHA10Q5JZY3 1008 aa19.83■□□□□ 0.77
PDLIM3-213ENST00000629667 TDRD3Q9H7E2 651 aaKnown RBP19.83■□□□□ 0.77
PDLIM3-213ENST00000629667 ZNF70Q9UC06 446 aaPredicted RBP19.83■□□□□ 0.77
PDLIM3-213ENST00000629667 SERPINA10Q9UK55 444 aa19.83■□□□□ 0.77
PDLIM3-213ENST00000629667 KIAA0100Q14667 2235 aaKnown RBP19.83■□□□□ 0.76
PDLIM3-213ENST00000629667 TDRD7Q8NHU6 1098 aaKnown RBP19.82■□□□□ 0.76
PDLIM3-213ENST00000629667 ARMC5Q96C12 935 aa19.82■□□□□ 0.76
PDLIM3-213ENST00000629667 C9orf78Q9NZ63 289 aaPredicted RBP19.82■□□□□ 0.76
PDLIM3-213ENST00000629667 HIBADHP31937 336 aaKnown RBP19.81■□□□□ 0.76
PDLIM3-213ENST00000629667 GYG1P46976 350 aa19.81■□□□□ 0.76
PDLIM3-213ENST00000629667 TNNI2P48788 182 aa19.81■□□□□ 0.76
PDLIM3-213ENST00000629667 EXOSC9Q06265 439 aaKnown RBP19.81■□□□□ 0.76
PDLIM3-213ENST00000629667 UBE4AQ14139 1066 aa19.81■□□□□ 0.76
PDLIM3-213ENST00000629667 ARHGEF6Q15052 776 aa19.81■□□□□ 0.76
PDLIM3-213ENST00000629667 HABP4Q5JVS0 413 aaKnown RBP19.81■□□□□ 0.76
PDLIM3-213ENST00000629667 SALL2Q9Y467 1007 aaPredicted RBP19.81■□□□□ 0.76
PDLIM3-213ENST00000629667 TCP10L2B9ZVM9 353 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms