RNA–Protein interactions for RNA: ENST00000622483.4

PCSK6-220, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 3,132 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-220ENST00000622483 CHST3Q7LGC8 479 aa25.14■■□□□ 1.62
PCSK6-220ENST00000622483 EFCAB8A8MWE9 144 aa25.14■■□□□ 1.61
PCSK6-220ENST00000622483 POLR3DP05423 398 aaPredicted RBP25.14■■□□□ 1.61
PCSK6-220ENST00000622483 LRRFIP1Q32MZ4 808 aaKnown RBP25.14■■□□□ 1.61
PCSK6-220ENST00000622483 KLHL34Q8N239 644 aa25.14■■□□□ 1.61
PCSK6-220ENST00000622483 FUT8Q9BYC5 575 aa25.14■■□□□ 1.61
PCSK6-220ENST00000622483 PUF60Q9UHX1 559 aaKnown RBP25.14■■□□□ 1.61
PCSK6-220ENST00000622483 TMEM232C9JQI7 657 aa25.13■■□□□ 1.61
PCSK6-220ENST00000622483 PPP2R3AQ06190 1150 aa25.13■■□□□ 1.61
PCSK6-220ENST00000622483 CFAP100Q494V2 611 aa25.13■■□□□ 1.61
PCSK6-220ENST00000622483 GOLGA5Q8TBA6 731 aa25.13■■□□□ 1.61
PCSK6-220ENST00000622483 CTAGE5O15320 804 aa25.13■■□□□ 1.61
PCSK6-220ENST00000622483 CCDC158Q5M9N0 1113 aa25.13■■□□□ 1.61
PCSK6-220ENST00000622483 LEKR1Q6ZMV7 388 aa25.13■■□□□ 1.61
PCSK6-220ENST00000622483 KLHDC4Q8TBB5 520 aa25.13■■□□□ 1.61
PCSK6-220ENST00000622483 DESI2Q9BSY9 194 aa25.13■■□□□ 1.61
PCSK6-220ENST00000622483 ANKRD1Q15327 319 aa25.12■■□□□ 1.61
PCSK6-220ENST00000622483 SERPINC1P01008 464 aa25.12■■□□□ 1.61
PCSK6-220ENST00000622483 LONRF2Q1L5Z9 754 aa25.12■■□□□ 1.61
PCSK6-220ENST00000622483 ACTN2P35609 894 aa25.12■■□□□ 1.61
PCSK6-220ENST00000622483 SF3A1Q15459 793 aaKnown RBP25.12■■□□□ 1.61
PCSK6-220ENST00000622483 ENGASEQ8NFI3 743 aa25.12■■□□□ 1.61
PCSK6-220ENST00000622483 EVI5LQ96CN4 794 aa25.12■■□□□ 1.61
PCSK6-220ENST00000622483 PCDHA7Q9UN72 937 aa25.12■■□□□ 1.61
PCSK6-220ENST00000622483 FANCCQ00597 558 aa25.11■■□□□ 1.61
PCSK6-220ENST00000622483 PRR29P0C7W0 189 aa25.11■■□□□ 1.61
PCSK6-220ENST00000622483 UBXN6Q9BZV1 441 aa25.11■■□□□ 1.61
PCSK6-220ENST00000622483 JRKLQ9Y4A0 524 aa25.11■■□□□ 1.61
PCSK6-220ENST00000622483 SLC39A6Q13433 755 aa25.1■■□□□ 1.61
PCSK6-220ENST00000622483 IMPACTQ9P2X3 320 aa25.1■■□□□ 1.61
PCSK6-220ENST00000622483 RAB11FIP4Q86YS3 637 aa25.1■■□□□ 1.61
PCSK6-220ENST00000622483 GJB4Q9NTQ9 266 aa25.1■■□□□ 1.61
PCSK6-220ENST00000622483 ARHGEF10O15013 1369 aa25.1■■□□□ 1.61
PCSK6-220ENST00000622483 A0A0G2JS52 829 aa25.1■■□□□ 1.61
PCSK6-220ENST00000622483 PRAMEF22A3QJZ6 481 aa25.1■■□□□ 1.61
PCSK6-220ENST00000622483 APOBRQ0VD83 1088 aa25.1■■□□□ 1.61
PCSK6-220ENST00000622483 DHX58Q96C10 678 aa25.1■■□□□ 1.61
PCSK6-220ENST00000622483 TTC31Q49AM3 519 aaPredicted RBP25.09■■□□□ 1.61
PCSK6-220ENST00000622483 RCOR1Q9UKL0 485 aa25.09■■□□□ 1.61
PCSK6-220ENST00000622483 VWA3AA6NCI4 1184 aa25.09■■□□□ 1.61
PCSK6-220ENST00000622483 ADAMTS2O95450 1211 aa25.09■■□□□ 1.61
PCSK6-220ENST00000622483 PIP4K2AP48426 406 aaPredicted RBP25.09■■□□□ 1.61
PCSK6-220ENST00000622483 FAN1Q9Y2M0 1017 aa25.09■■□□□ 1.61
PCSK6-220ENST00000622483 STRCQ7RTU9 1775 aa25.09■■□□□ 1.61
PCSK6-220ENST00000622483 UBASH3AP57075 661 aa25.08■■□□□ 1.61
PCSK6-220ENST00000622483 EAF2Q96CJ1 260 aaPredicted RBP25.08■■□□□ 1.61
PCSK6-220ENST00000622483 SPATA31A3Q5VYP0 1347 aa25.08■■□□□ 1.61
PCSK6-220ENST00000622483 PHLPP2Q6ZVD8 1323 aa25.08■■□□□ 1.61
PCSK6-220ENST00000622483 NUTM2BA6NNL0 878 aaPredicted RBP25.08■■□□□ 1.61
PCSK6-220ENST00000622483 NUTM2EB1AL46 878 aaPredicted RBP25.08■■□□□ 1.61
PCSK6-220ENST00000622483 EP400NLQ6ZTU2 488 aa25.08■■□□□ 1.61
PCSK6-220ENST00000622483 NUTM2AQ8IVF1 878 aaPredicted RBP25.08■■□□□ 1.61
PCSK6-220ENST00000622483 KCNB2Q92953 911 aa25.08■■□□□ 1.61
PCSK6-220ENST00000622483 GPATCH3Q96I76 525 aa25.08■■□□□ 1.61
PCSK6-220ENST00000622483 KIAA1468Q9P260 1216 aa25.08■■□□□ 1.61
PCSK6-220ENST00000622483 TTC41PQ6P2S7 1318 aa25.08■■□□□ 1.61
PCSK6-220ENST00000622483 TOM1L2Q6ZVM7 507 aa25.08■■□□□ 1.6
PCSK6-220ENST00000622483 GOLGA6L1Q8N7Z2 621 aa25.08■■□□□ 1.6
PCSK6-220ENST00000622483 NEK1Q96PY6 1258 aa25.08■■□□□ 1.6
PCSK6-220ENST00000622483 ZSCAN16Q9H4T2 348 aaPredicted RBP25.08■■□□□ 1.6
PCSK6-220ENST00000622483 CHPF2Q9P2E5 772 aa25.08■■□□□ 1.6
PCSK6-220ENST00000622483 PTPDC1A2A3K4 754 aa25.07■■□□□ 1.6
PCSK6-220ENST00000622483 RAPGEF4Q8WZA2 1011 aa25.07■■□□□ 1.6
PCSK6-220ENST00000622483 MRPS27Q92552 414 aaKnown RBP25.07■■□□□ 1.6
PCSK6-220ENST00000622483 C9orf78Q9NZ63 289 aaPredicted RBP25.07■■□□□ 1.6
PCSK6-220ENST00000622483 EIF3CLB5ME19 914 aaKnown RBP25.06■■□□□ 1.6
PCSK6-220ENST00000622483 ADKP55263 362 aaKnown RBP25.06■■□□□ 1.6
PCSK6-220ENST00000622483 TEFQ10587 303 aa25.06■■□□□ 1.6
PCSK6-220ENST00000622483 CCDC102AQ96A19 550 aa25.06■■□□□ 1.6
PCSK6-220ENST00000622483 EIF3CQ99613 913 aaKnown RBP25.06■■□□□ 1.6
PCSK6-220ENST00000622483 KCND1Q9NSA2 647 aa25.06■■□□□ 1.6
PCSK6-220ENST00000622483 PPP2R2CQ9Y2T4 447 aa25.06■■□□□ 1.6
PCSK6-220ENST00000622483 TOGARAM2Q6ZUX3 1019 aa25.06■■□□□ 1.6
PCSK6-220ENST00000622483 MAP3K5Q99683 1374 aa25.06■■□□□ 1.6
PCSK6-220ENST00000622483 CWF19L2Q2TBE0 894 aaKnown RBP25.06■■□□□ 1.6
PCSK6-220ENST00000622483 C1orf141Q5JVX7 400 aa25.06■■□□□ 1.6
PCSK6-220ENST00000622483 TTLL5Q6EMB2 1281 aa25.06■■□□□ 1.6
PCSK6-220ENST00000622483 FMR1NBQ8N0W7 255 aaPredicted RBP25.06■■□□□ 1.6
PCSK6-220ENST00000622483 EXOC4Q96A65 974 aa25.06■■□□□ 1.6
PCSK6-220ENST00000622483 RABEP2Q9H5N1 569 aa25.06■■□□□ 1.6
PCSK6-220ENST00000622483 CLIC4Q9Y696 253 aa25.06■■□□□ 1.6
PCSK6-220ENST00000622483 A0A0U1RQJ8 604 aa25.05■■□□□ 1.6
PCSK6-220ENST00000622483 GPR161Q8N6U8 529 aaKnown RBP25.05■■□□□ 1.6
PCSK6-220ENST00000622483 CCDC12Q8WUD4 166 aaPredicted RBP25.05■■□□□ 1.6
PCSK6-220ENST00000622483 ATRIPQ8WXE1 791 aa25.05■■□□□ 1.6
PCSK6-220ENST00000622483 SLC3A2P08195 630 aaKnown RBP25.05■■□□□ 1.6
PCSK6-220ENST00000622483 KDRP35968 1356 aa25.05■■□□□ 1.6
PCSK6-220ENST00000622483 A0A1B0GUL7 405 aa25.04■■□□□ 1.6
PCSK6-220ENST00000622483 RHOXF2BP0C7M4 288 aa25.04■■□□□ 1.6
PCSK6-220ENST00000622483 RHOXF2Q9BQY4 288 aa25.04■■□□□ 1.6
PCSK6-220ENST00000622483 LZTFL1Q9NQ48 299 aa25.04■■□□□ 1.6
PCSK6-220ENST00000622483 RNF216Q9NWF9 866 aaPredicted RBP25.04■■□□□ 1.6
PCSK6-220ENST00000622483 KAT6BQ8WYB5 2073 aa25.04■■□□□ 1.6
PCSK6-220ENST00000622483 A0A0G2JLW4 131 aa25.04■■□□□ 1.6
PCSK6-220ENST00000622483 NCAPHQ15003 741 aa25.04■■□□□ 1.6
PCSK6-220ENST00000622483 ILDR1Q86SU0 546 aaPredicted RBP25.04■■□□□ 1.6
PCSK6-220ENST00000622483 STK38Q15208 465 aa25.03■■□□□ 1.6
PCSK6-220ENST00000622483 CTDNEP1O95476 244 aa25.03■■□□□ 1.6
PCSK6-220ENST00000622483 MARCKSP29966 332 aaPredicted RBP25.03■■□□□ 1.6
PCSK6-220ENST00000622483 MTX1Q13505 466 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms