RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 SPRYD7Q5W111 196 aa10.01□□□□□ -0.81
CLK1-215ENST00000621181 KLRK1P26718 216 aa10□□□□□ -0.81
CLK1-215ENST00000621181 CFHR5Q9BXR6 569 aa10□□□□□ -0.81
CLK1-215ENST00000621181 ANKRD2Q9GZV1 360 aa10□□□□□ -0.81
CLK1-215ENST00000621181 DEFB129Q9H1M3 183 aa10□□□□□ -0.81
CLK1-215ENST00000621181 R3HDMLQ9H3Y0 253 aa10□□□□□ -0.81
CLK1-215ENST00000621181 MANSC4A6NHS7 340 aaPredicted RBP10□□□□□ -0.81
CLK1-215ENST00000621181 PPP1R12BO60237 982 aaPredicted RBP10□□□□□ -0.81
CLK1-215ENST00000621181 DLGAP5Q15398 846 aa10□□□□□ -0.81
CLK1-215ENST00000621181 LDLRAD1Q5T700 205 aa10□□□□□ -0.81
CLK1-215ENST00000621181 SLC10A4Q96EP9 437 aa10□□□□□ -0.81
CLK1-215ENST00000621181 FZD1Q9UP38 647 aa10□□□□□ -0.81
CLK1-215ENST00000621181 TRIM17Q9Y577 477 aa10□□□□□ -0.81
CLK1-215ENST00000621181 SUPT16HQ9Y5B9 1047 aaKnown RBP10□□□□□ -0.81
CLK1-215ENST00000621181 ZNF646O15015 1829 aaPredicted RBP10□□□□□ -0.81
CLK1-215ENST00000621181 MYO1BO43795 1136 aa9.99□□□□□ -0.81
CLK1-215ENST00000621181 INHBEP58166 350 aa9.99□□□□□ -0.81
CLK1-215ENST00000621181 IFNL1Q8IU54 200 aa9.99□□□□□ -0.81
CLK1-215ENST00000621181 TSR2Q969E8 191 aaKnown RBP9.99□□□□□ -0.81
CLK1-215ENST00000621181 COL1A1P02452 1464 aaPredicted RBP9.99□□□□□ -0.81
CLK1-215ENST00000621181 KIAA0100Q14667 2235 aaKnown RBP9.99□□□□□ -0.81
CLK1-215ENST00000621181 H7C1W4 665 aa9.98□□□□□ -0.81
CLK1-215ENST00000621181 CCER2I3L3R5 266 aa9.98□□□□□ -0.81
CLK1-215ENST00000621181 ZBTB48P10074 688 aaPredicted RBP9.98□□□□□ -0.81
CLK1-215ENST00000621181 CHRNDQ07001 517 aa9.98□□□□□ -0.81
CLK1-215ENST00000621181 GCKRQ14397 625 aa9.98□□□□□ -0.81
CLK1-215ENST00000621181 GCC1Q96CN9 775 aa9.98□□□□□ -0.81
CLK1-215ENST00000621181 MYH16Q9H6N6 1097 aa9.98□□□□□ -0.81
CLK1-215ENST00000621181 PRKRIP1Q9H875 184 aaPredicted RBP9.98□□□□□ -0.81
CLK1-215ENST00000621181 CD209Q9NNX6 404 aa9.98□□□□□ -0.81
CLK1-215ENST00000621181 F8W031 263 aaPredicted RBP9.98□□□□□ -0.81
CLK1-215ENST00000621181 TWISTNBQ3B726 338 aaPredicted RBP9.98□□□□□ -0.81
CLK1-215ENST00000621181 ZBED3Q96IU2 234 aaPredicted RBP9.98□□□□□ -0.81
CLK1-215ENST00000621181 PLA2G12BQ9BX93 195 aa9.98□□□□□ -0.81
CLK1-215ENST00000621181 PPP2R3BQ9Y5P8 575 aa9.98□□□□□ -0.81
CLK1-215ENST00000621181 CLRN2A0PK11 232 aa9.97□□□□□ -0.81
CLK1-215ENST00000621181 ANKRD18BA2A2Z9 1011 aa9.97□□□□□ -0.81
CLK1-215ENST00000621181 SNAP23O00161 211 aa9.97□□□□□ -0.81
CLK1-215ENST00000621181 FKBP5Q13451 457 aaPredicted RBP9.97□□□□□ -0.81
CLK1-215ENST00000621181 MAP3K11Q16584 847 aa9.97□□□□□ -0.81
CLK1-215ENST00000621181 SUPT20HL1Q3ZLR7 823 aa9.97□□□□□ -0.81
CLK1-215ENST00000621181 INTS3Q68E01 1043 aaKnown RBP9.97□□□□□ -0.81
CLK1-215ENST00000621181 OTUD7BQ6GQQ9 843 aa9.97□□□□□ -0.81
CLK1-215ENST00000621181 G2E3Q7L622 706 aa9.97□□□□□ -0.81
CLK1-215ENST00000621181 OTOP1Q7RTM1 612 aa9.97□□□□□ -0.81
CLK1-215ENST00000621181 WNK4Q96J92 1243 aa9.97□□□□□ -0.81
CLK1-215ENST00000621181 CLMNQ96JQ2 1002 aa9.97□□□□□ -0.81
CLK1-215ENST00000621181 VEZTQ9HBM0 779 aa9.97□□□□□ -0.81
CLK1-215ENST00000621181 IGF2BP3O00425 579 aaKnown RBP eCLIP9.96□□□□□ -0.81
CLK1-215ENST00000621181 TAF5LO75529 589 aa9.96□□□□□ -0.81
CLK1-215ENST00000621181 RBM5P52756 815 aaKnown RBP eCLIP9.96□□□□□ -0.81
CLK1-215ENST00000621181 FLIIQ13045 1269 aa9.96□□□□□ -0.81
CLK1-215ENST00000621181 IFIT5Q13325 482 aaKnown RBP9.96□□□□□ -0.81
CLK1-215ENST00000621181 ZNF804AQ7Z570 1209 aa9.96□□□□□ -0.81
CLK1-215ENST00000621181 CERS5Q8N5B7 392 aa9.96□□□□□ -0.81
CLK1-215ENST00000621181 HELBQ8NG08 1087 aaPredicted RBP9.96□□□□□ -0.81
CLK1-215ENST00000621181 CHMP3Q9Y3E7 222 aa9.96□□□□□ -0.81
CLK1-215ENST00000621181 CSF1RP07333 972 aa9.96□□□□□ -0.82
CLK1-215ENST00000621181 IREB2P48200 963 aaKnown RBP9.96□□□□□ -0.82
CLK1-215ENST00000621181 CFAP100Q494V2 611 aa9.96□□□□□ -0.82
CLK1-215ENST00000621181 MTMR14Q8NCE2 650 aa9.96□□□□□ -0.82
CLK1-215ENST00000621181 LINS1Q8NG48 757 aa9.96□□□□□ -0.82
CLK1-215ENST00000621181 DNAAF4Q8WXU2 420 aa9.96□□□□□ -0.82
CLK1-215ENST00000621181 ERO1AQ96HE7 468 aa9.96□□□□□ -0.82
CLK1-215ENST00000621181 PCDHAC2Q9Y5I4 1007 aa9.96□□□□□ -0.82
CLK1-215ENST00000621181 ECM29Q5VYK3 1845 aa9.95□□□□□ -0.82
CLK1-215ENST00000621181 POTEFA5A3E0 1075 aa9.95□□□□□ -0.82
CLK1-215ENST00000621181 UNCXA6NJT0 531 aa9.95□□□□□ -0.82
CLK1-215ENST00000621181 CASP7P55210 303 aa9.95□□□□□ -0.82
CLK1-215ENST00000621181 CRHR2Q13324 411 aa9.95□□□□□ -0.82
CLK1-215ENST00000621181 NBPF12Q5TAG4 269 aaPredicted RBP9.95□□□□□ -0.82
CLK1-215ENST00000621181 JAG2Q9Y219 1238 aa9.95□□□□□ -0.82
CLK1-215ENST00000621181 SSC5DA1L4H1 1573 aa9.95□□□□□ -0.82
CLK1-215ENST00000621181 IL1R1P14778 569 aa9.94□□□□□ -0.82
CLK1-215ENST00000621181 TNFAIP1Q13829 316 aa9.94□□□□□ -0.82
CLK1-215ENST00000621181 TAF7LQ5H9L4 462 aa9.94□□□□□ -0.82
CLK1-215ENST00000621181 C15orf52Q6ZUT6 534 aaKnown RBP9.94□□□□□ -0.82
CLK1-215ENST00000621181 ANKRD13AQ8IZ07 590 aa9.94□□□□□ -0.82
CLK1-215ENST00000621181 CD99L2Q8TCZ2 262 aa9.94□□□□□ -0.82
CLK1-215ENST00000621181 PRMT6Q96LA8 375 aaPredicted RBP9.94□□□□□ -0.82
CLK1-215ENST00000621181 PTPN22Q9Y2R2 807 aa9.94□□□□□ -0.82
CLK1-215ENST00000621181 PITPNM1O00562 1244 aa9.93□□□□□ -0.82
CLK1-215ENST00000621181 PLIN1O60240 522 aa9.93□□□□□ -0.82
CLK1-215ENST00000621181 FKBP1AP62942 108 aaKnown RBP9.93□□□□□ -0.82
CLK1-215ENST00000621181 SP3Q02447 781 aa9.93□□□□□ -0.82
CLK1-215ENST00000621181 RASA3Q14644 834 aa9.93□□□□□ -0.82
CLK1-215ENST00000621181 WWC1Q8IX03 1113 aa9.93□□□□□ -0.82
CLK1-215ENST00000621181 EFCC1Q9HA90 598 aa9.93□□□□□ -0.82
CLK1-215ENST00000621181 IRS2Q9Y4H2 1338 aa9.93□□□□□ -0.82
CLK1-215ENST00000621181 CCDC27Q2M243 656 aa9.93□□□□□ -0.82
CLK1-215ENST00000621181 CCDC57Q2TAC2 916 aa9.93□□□□□ -0.82
CLK1-215ENST00000621181 HABP4Q5JVS0 413 aaKnown RBP9.93□□□□□ -0.82
CLK1-215ENST00000621181 LDHAL6AQ6ZMR3 332 aa9.93□□□□□ -0.82
CLK1-215ENST00000621181 OPTNQ96CV9 577 aa9.93□□□□□ -0.82
CLK1-215ENST00000621181 CACNA1FO60840 1977 aa9.92□□□□□ -0.82
CLK1-215ENST00000621181 LAMB1P07942 1786 aa9.92□□□□□ -0.82
CLK1-215ENST00000621181 USP2O75604 605 aaPredicted RBP9.92□□□□□ -0.82
CLK1-215ENST00000621181 GJA5P36382 358 aa9.92□□□□□ -0.82
CLK1-215ENST00000621181 MFSD14BQ5SR56 506 aa9.92□□□□□ -0.82
CLK1-215ENST00000621181 PTPN18Q99952 460 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms