RNA–Protein interactions for RNA: ENST00000620502.4

BRCC3-209, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-209ENST00000620502 CHD4Q14839 1912 aa8.38□□□□□ -1.07
BRCC3-209ENST00000620502 IBTKQ9P2D0 1353 aaPredicted RBP8.37□□□□□ -1.07
BRCC3-209ENST00000620502 CACNA1FO60840 1977 aa8.37□□□□□ -1.07
BRCC3-209ENST00000620502 E9PSI1 815 aa8.37□□□□□ -1.07
BRCC3-209ENST00000620502 SRGNP10124 158 aa8.37□□□□□ -1.07
BRCC3-209ENST00000620502 JUNDP17535 347 aa8.37□□□□□ -1.07
BRCC3-209ENST00000620502 CSPP1Q1MSJ5 1256 aa8.37□□□□□ -1.07
BRCC3-209ENST00000620502 PARP10Q53GL7 1025 aa8.37□□□□□ -1.07
BRCC3-209ENST00000620502 HSP90AB3PQ58FF7 597 aa8.37□□□□□ -1.07
BRCC3-209ENST00000620502 DALRD3Q5D0E6 543 aaKnown RBP8.37□□□□□ -1.07
BRCC3-209ENST00000620502 SLC10A5Q5PT55 438 aa8.37□□□□□ -1.07
BRCC3-209ENST00000620502 PRR7Q8TB68 274 aa8.37□□□□□ -1.07
BRCC3-209ENST00000620502 ISCA1Q9BUE6 129 aa8.37□□□□□ -1.07
BRCC3-209ENST00000620502 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.37□□□□□ -1.07
BRCC3-209ENST00000620502 NYXQ9GZU5 481 aa8.37□□□□□ -1.07
BRCC3-209ENST00000620502 GOPCQ9HD26 462 aa8.37□□□□□ -1.07
BRCC3-209ENST00000620502 PDZRN3Q9UPQ7 1066 aa8.37□□□□□ -1.07
BRCC3-209ENST00000620502 FCF1Q9Y324 198 aaKnown RBP8.37□□□□□ -1.07
BRCC3-209ENST00000620502 RIC1Q4ADV7 1423 aa8.37□□□□□ -1.07
BRCC3-209ENST00000620502 ABCC12Q96J65 1359 aa8.36□□□□□ -1.07
BRCC3-209ENST00000620502 ATP5J2-PTCD1G3V325 749 aa8.36□□□□□ -1.07
BRCC3-209ENST00000620502 NPHP1O15259 732 aa8.36□□□□□ -1.07
BRCC3-209ENST00000620502 GTF2E1P29083 439 aaPredicted RBP8.36□□□□□ -1.07
BRCC3-209ENST00000620502 TRIM28Q13263 835 aaKnown RBP8.36□□□□□ -1.07
BRCC3-209ENST00000620502 CRY2Q49AN0 593 aa8.36□□□□□ -1.07
BRCC3-209ENST00000620502 STYK1Q6J9G0 422 aa8.36□□□□□ -1.07
BRCC3-209ENST00000620502 KSR2Q6VAB6 950 aa8.36□□□□□ -1.07
BRCC3-209ENST00000620502 PPP1R42Q7Z4L9 355 aa8.36□□□□□ -1.07
BRCC3-209ENST00000620502 SYNE4Q8N205 404 aa8.36□□□□□ -1.07
BRCC3-209ENST00000620502 PROCA1Q8NCQ7 364 aaPredicted RBP8.36□□□□□ -1.07
BRCC3-209ENST00000620502 UTP14AQ9BVJ6 771 aaKnown RBP8.36□□□□□ -1.07
BRCC3-209ENST00000620502 STK31Q9BXU1 1019 aa8.36□□□□□ -1.07
BRCC3-209ENST00000620502 PRKD2Q9BZL6 878 aa8.36□□□□□ -1.07
BRCC3-209ENST00000620502 V9GY48 417 aaPredicted RBP8.36□□□□□ -1.07
BRCC3-209ENST00000620502 SLX4Q8IY92 1834 aa8.36□□□□□ -1.07
BRCC3-209ENST00000620502 ADCY9O60503 1353 aa8.35□□□□□ -1.07
BRCC3-209ENST00000620502 LAMB2P55268 1798 aa8.35□□□□□ -1.07
BRCC3-209ENST00000620502 CACNA1SQ13698 1873 aa8.35□□□□□ -1.07
BRCC3-209ENST00000620502 PI4KAP2A4QPH2 592 aa8.35□□□□□ -1.07
BRCC3-209ENST00000620502 CFAP99D6REC4 459 aa8.35□□□□□ -1.07
BRCC3-209ENST00000620502 DESI1Q6ICB0 168 aa8.35□□□□□ -1.07
BRCC3-209ENST00000620502 LIAT1Q6ZQX7 453 aa8.35□□□□□ -1.07
BRCC3-209ENST00000620502 TTLL6Q8N841 843 aa8.35□□□□□ -1.07
BRCC3-209ENST00000620502 PI4KAP1Q8N8J0 262 aa8.35□□□□□ -1.07
BRCC3-209ENST00000620502 ZNF622Q969S3 477 aaKnown RBP eCLIP8.35□□□□□ -1.07
BRCC3-209ENST00000620502 ZNF428Q96B54 188 aa8.35□□□□□ -1.07
BRCC3-209ENST00000620502 MASTLQ96GX5 879 aa8.35□□□□□ -1.07
BRCC3-209ENST00000620502 METTL22Q9BUU2 404 aaPredicted RBP8.35□□□□□ -1.07
BRCC3-209ENST00000620502 MAP3K2Q9Y2U5 619 aa8.35□□□□□ -1.07
BRCC3-209ENST00000620502 DDX60Q8IY21 1712 aaKnown RBP8.34□□□□□ -1.07
BRCC3-209ENST00000620502 RNF123Q5XPI4 1314 aa8.34□□□□□ -1.07
BRCC3-209ENST00000620502 DDX58O95786 925 aaKnown RBP8.34□□□□□ -1.07
BRCC3-209ENST00000620502 NPR1P16066 1061 aa8.34□□□□□ -1.07
BRCC3-209ENST00000620502 YY1P25490 414 aa8.34□□□□□ -1.07
BRCC3-209ENST00000620502 HOXA10P31260 410 aaPredicted RBP8.34□□□□□ -1.07
BRCC3-209ENST00000620502 SLC19A1P41440 591 aa8.34□□□□□ -1.07
BRCC3-209ENST00000620502 FLIIQ13045 1269 aa8.34□□□□□ -1.07
BRCC3-209ENST00000620502 ARHGAP27Q6ZUM4 889 aa8.34□□□□□ -1.07
BRCC3-209ENST00000620502 C7orf43Q8WVR3 580 aa8.34□□□□□ -1.07
BRCC3-209ENST00000620502 CNKSR1Q969H4 720 aa8.34□□□□□ -1.07
BRCC3-209ENST00000620502 MYD88Q99836 296 aa8.34□□□□□ -1.07
BRCC3-209ENST00000620502 TRMT112Q9UI30 125 aaKnown RBP8.34□□□□□ -1.07
BRCC3-209ENST00000620502 SBF1O95248 1867 aa8.34□□□□□ -1.07
BRCC3-209ENST00000620502 SH3TC1Q8TE82 1336 aa8.33□□□□□ -1.08
BRCC3-209ENST00000620502 C21orf2O43822 256 aa8.33□□□□□ -1.08
BRCC3-209ENST00000620502 IGKV5-2P06315 115 aa8.33□□□□□ -1.08
BRCC3-209ENST00000620502 FER1L6Q2WGJ9 1857 aa8.33□□□□□ -1.08
BRCC3-209ENST00000620502 RTL5Q5HYW3 569 aaPredicted RBP8.33□□□□□ -1.08
BRCC3-209ENST00000620502 CCDC191Q8NCU4 936 aa8.33□□□□□ -1.08
BRCC3-209ENST00000620502 FAM89AQ96GI7 184 aa8.33□□□□□ -1.08
BRCC3-209ENST00000620502 NLRP3Q96P20 1036 aa8.33□□□□□ -1.08
BRCC3-209ENST00000620502 HCLS1P14317 486 aaPredicted RBP8.32□□□□□ -1.08
BRCC3-209ENST00000620502 ALDH1B1P30837 517 aa8.32□□□□□ -1.08
BRCC3-209ENST00000620502 PRELPP51888 382 aa8.32□□□□□ -1.08
BRCC3-209ENST00000620502 HNRNPUQ00839 825 aaKnown RBP eCLIP8.32□□□□□ -1.08
BRCC3-209ENST00000620502 FKBP5Q13451 457 aaPredicted RBP8.32□□□□□ -1.08
BRCC3-209ENST00000620502 PRPF40BQ6NWY9 871 aaKnown RBP8.32□□□□□ -1.08
BRCC3-209ENST00000620502 ZBTB38Q8NAP3 1195 aaPredicted RBP8.32□□□□□ -1.08
BRCC3-209ENST00000620502 SSH1Q8WYL5 1049 aa8.32□□□□□ -1.08
BRCC3-209ENST00000620502 CRAMP1Q96RY5 1269 aa8.32□□□□□ -1.08
BRCC3-209ENST00000620502 TAF1P21675 1872 aa8.32□□□□□ -1.08
BRCC3-209ENST00000620502 NEURL1BA8MQ27 555 aa8.31□□□□□ -1.08
BRCC3-209ENST00000620502 F6X3S4 739 aa8.31□□□□□ -1.08
BRCC3-209ENST00000620502 NFKBIEO00221 500 aa8.31□□□□□ -1.08
BRCC3-209ENST00000620502 PCCAP05165 728 aaPredicted RBP8.31□□□□□ -1.08
BRCC3-209ENST00000620502 SF3B3Q15393 1217 aaKnown RBP8.31□□□□□ -1.08
BRCC3-209ENST00000620502 PTPRNQ16849 979 aa8.31□□□□□ -1.08
BRCC3-209ENST00000620502 CWF19L2Q2TBE0 894 aaKnown RBP8.31□□□□□ -1.08
BRCC3-209ENST00000620502 PPP2R2DQ66LE6 453 aa8.31□□□□□ -1.08
BRCC3-209ENST00000620502 OLFM4Q6UX06 510 aa8.31□□□□□ -1.08
BRCC3-209ENST00000620502 DNAAF4Q8WXU2 420 aa8.31□□□□□ -1.08
BRCC3-209ENST00000620502 JARID2Q92833 1246 aaPredicted RBP8.31□□□□□ -1.08
BRCC3-209ENST00000620502 CWC25Q9NXE8 425 aaPredicted RBP8.31□□□□□ -1.08
BRCC3-209ENST00000620502 CCDC88AQ3V6T2 1871 aa8.31□□□□□ -1.08
BRCC3-209ENST00000620502 COL4A1P02462 1669 aa8.3□□□□□ -1.08
BRCC3-209ENST00000620502 SNED1Q8TER0 1413 aa8.3□□□□□ -1.08
BRCC3-209ENST00000620502 H7C1W4 665 aa8.3□□□□□ -1.08
BRCC3-209ENST00000620502 IRS4O14654 1257 aaPredicted RBP8.3□□□□□ -1.08
BRCC3-209ENST00000620502 CT47B1P0C2W7 299 aaPredicted RBP8.3□□□□□ -1.08
BRCC3-209ENST00000620502 RPIAP49247 311 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms