RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 PARP1P09874 1014 aaKnown RBP21.17■□□□□ 0.98
GABPB1-212ENST00000615671 CYLC1P35663 651 aaPredicted RBP21.17■□□□□ 0.98
GABPB1-212ENST00000615671 SPECC1LQ69YQ0 1117 aa21.17■□□□□ 0.98
GABPB1-212ENST00000615671 RASAL2Q9UJF2 1139 aa21.17■□□□□ 0.98
GABPB1-212ENST00000615671 DNM1Q05193 864 aaKnown RBP21.16■□□□□ 0.98
GABPB1-212ENST00000615671 CCDC117Q8IWD4 279 aaPredicted RBP21.16■□□□□ 0.98
GABPB1-212ENST00000615671 FBF1Q8TES7 1133 aa21.16■□□□□ 0.98
GABPB1-212ENST00000615671 BICC1Q9H694 974 aaKnown RBP21.16■□□□□ 0.98
GABPB1-212ENST00000615671 ODF2LQ9ULJ1 636 aa21.16■□□□□ 0.98
GABPB1-212ENST00000615671 PTPDC1A2A3K4 754 aa21.16■□□□□ 0.98
GABPB1-212ENST00000615671 EIF4A2Q14240 407 aaKnown RBP21.16■□□□□ 0.98
GABPB1-212ENST00000615671 MAK16Q9BXY0 300 aaKnown RBP21.16■□□□□ 0.98
GABPB1-212ENST00000615671 TCP10Q12799 353 aa21.16■□□□□ 0.98
GABPB1-212ENST00000615671 PLVAPQ9BX97 442 aa21.16■□□□□ 0.98
GABPB1-212ENST00000615671 STK32BQ9NY57 414 aa21.16■□□□□ 0.98
GABPB1-212ENST00000615671 CCNL1Q9UK58 526 aaPredicted RBP21.16■□□□□ 0.98
GABPB1-212ENST00000615671 RTL9Q8NET4 1388 aa21.16■□□□□ 0.98
GABPB1-212ENST00000615671 C6orf163Q5TEZ5 329 aa21.16■□□□□ 0.98
GABPB1-212ENST00000615671 GPIHBP1Q8IV16 184 aa21.16■□□□□ 0.98
GABPB1-212ENST00000615671 CCDC65Q8IXS2 484 aa21.16■□□□□ 0.98
GABPB1-212ENST00000615671 CNBD1Q8NA66 436 aa21.16■□□□□ 0.98
GABPB1-212ENST00000615671 RNF113AO15541 343 aaKnown RBP21.16■□□□□ 0.98
GABPB1-212ENST00000615671 BIRC3Q13489 604 aa21.16■□□□□ 0.98
GABPB1-212ENST00000615671 ZNF174Q15697 407 aa21.16■□□□□ 0.98
GABPB1-212ENST00000615671 LETM2Q2VYF4 491 aa21.16■□□□□ 0.98
GABPB1-212ENST00000615671 MRRFQ96E11 262 aaKnown RBP21.15■□□□□ 0.98
GABPB1-212ENST00000615671 TEX11Q8IYF3 940 aa21.15■□□□□ 0.98
GABPB1-212ENST00000615671 C14orf93Q9H972 538 aaKnown RBP21.15■□□□□ 0.98
GABPB1-212ENST00000615671 PPP4R3BQ5MIZ7 849 aa21.15■□□□□ 0.98
GABPB1-212ENST00000615671 RTL1A6NKG5 1358 aa21.15■□□□□ 0.98
GABPB1-212ENST00000615671 NCOA1Q15788 1441 aa21.15■□□□□ 0.98
GABPB1-212ENST00000615671 SCAF11Q99590 1463 aaKnown RBP21.15■□□□□ 0.98
GABPB1-212ENST00000615671 KARSQ15046 597 aaKnown RBP21.15■□□□□ 0.98
GABPB1-212ENST00000615671 SPOUT1Q5T280 376 aaKnown RBP21.15■□□□□ 0.98
GABPB1-212ENST00000615671 TRAF1Q13077 416 aa21.14■□□□□ 0.98
GABPB1-212ENST00000615671 GPHNQ9NQX3 736 aaPredicted RBP21.14■□□□□ 0.98
GABPB1-212ENST00000615671 KIF4AO95239 1232 aa21.14■□□□□ 0.97
GABPB1-212ENST00000615671 IRX5P78411 483 aaPredicted RBP21.14■□□□□ 0.97
GABPB1-212ENST00000615671 UAP1Q16222 522 aaPredicted RBP21.14■□□□□ 0.97
GABPB1-212ENST00000615671 MRPS27Q92552 414 aaKnown RBP21.14■□□□□ 0.97
GABPB1-212ENST00000615671 MBD4O95243 580 aa21.14■□□□□ 0.97
GABPB1-212ENST00000615671 PDE1AP54750 535 aa21.14■□□□□ 0.97
GABPB1-212ENST00000615671 PPP1R21Q6ZMI0 780 aa21.14■□□□□ 0.97
GABPB1-212ENST00000615671 TRIM75PA6NK02 468 aa21.14■□□□□ 0.97
GABPB1-212ENST00000615671 POTEB2H3BUK9 544 aa21.14■□□□□ 0.97
GABPB1-212ENST00000615671 KCNG4Q8TDN1 519 aa21.14■□□□□ 0.97
GABPB1-212ENST00000615671 FAM89AQ96GI7 184 aa21.14■□□□□ 0.97
GABPB1-212ENST00000615671 ESYT1Q9BSJ8 1104 aa21.14■□□□□ 0.97
GABPB1-212ENST00000615671 CTAGE1Q96RT6 745 aa21.14■□□□□ 0.97
GABPB1-212ENST00000615671 HAUS7Q99871 368 aa21.14■□□□□ 0.97
GABPB1-212ENST00000615671 USH1GQ495M9 461 aa21.13■□□□□ 0.97
GABPB1-212ENST00000615671 MSL1Q68DK7 614 aa21.13■□□□□ 0.97
GABPB1-212ENST00000615671 NEK11Q8NG66 645 aa21.13■□□□□ 0.97
GABPB1-212ENST00000615671 NUCB1Q02818 461 aa21.13■□□□□ 0.97
GABPB1-212ENST00000615671 CCDC129Q6ZRS4 1044 aa21.13■□□□□ 0.97
GABPB1-212ENST00000615671 IPO4Q8TEX9 1081 aaKnown RBP21.13■□□□□ 0.97
GABPB1-212ENST00000615671 PPP1R9BQ96SB3 815 aa21.13■□□□□ 0.97
GABPB1-212ENST00000615671 DNAI1Q9UI46 699 aa21.13■□□□□ 0.97
GABPB1-212ENST00000615671 CEP83Q9Y592 693 aa21.13■□□□□ 0.97
GABPB1-212ENST00000615671 FAM98CQ17RN3 349 aaKnown RBP21.13■□□□□ 0.97
GABPB1-212ENST00000615671 BMP2KLQ5H9B9 411 aa21.13■□□□□ 0.97
GABPB1-212ENST00000615671 FAM169AQ9Y6X4 670 aa21.13■□□□□ 0.97
GABPB1-212ENST00000615671 ANKRD2Q9GZV1 360 aa21.12■□□□□ 0.97
GABPB1-212ENST00000615671 ARMT1Q9H993 441 aa21.12■□□□□ 0.97
GABPB1-212ENST00000615671 PPP2R5DQ14738 602 aa21.12■□□□□ 0.97
GABPB1-212ENST00000615671 BEGAINQ9BUH8 593 aa21.12■□□□□ 0.97
GABPB1-212ENST00000615671 DACT1Q9NYF0 836 aa21.12■□□□□ 0.97
GABPB1-212ENST00000615671 KIAA0586Q9BVV6 1533 aa21.12■□□□□ 0.97
GABPB1-212ENST00000615671 VWA3AA6NCI4 1184 aa21.12■□□□□ 0.97
GABPB1-212ENST00000615671 PLCG2P16885 1265 aa21.12■□□□□ 0.97
GABPB1-212ENST00000615671 CCDC6Q16204 474 aa21.12■□□□□ 0.97
GABPB1-212ENST00000615671 EHBP1Q8NDI1 1231 aa21.12■□□□□ 0.97
GABPB1-212ENST00000615671 TXNDC16Q9P2K2 825 aa21.12■□□□□ 0.97
GABPB1-212ENST00000615671 GUCA1BQ9UMX6 200 aa21.12■□□□□ 0.97
GABPB1-212ENST00000615671 NEMFO60524 1076 aa21.12■□□□□ 0.97
GABPB1-212ENST00000615671 ERCC3P19447 782 aa21.12■□□□□ 0.97
GABPB1-212ENST00000615671 IFT81Q8WYA0 676 aa21.12■□□□□ 0.97
GABPB1-212ENST00000615671 ATP6V0A2Q9Y487 856 aa21.12■□□□□ 0.97
GABPB1-212ENST00000615671 SNX16P57768 344 aa21.11■□□□□ 0.97
GABPB1-212ENST00000615671 CCNT1O60563 726 aaKnown RBP21.11■□□□□ 0.97
GABPB1-212ENST00000615671 PPP1R7Q15435 360 aa21.11■□□□□ 0.97
GABPB1-212ENST00000615671 DTHD1Q6ZMT9 781 aa21.11■□□□□ 0.97
GABPB1-212ENST00000615671 HS2ST1Q7LGA3 356 aa21.11■□□□□ 0.97
GABPB1-212ENST00000615671 DNMBPQ6XZF7 1577 aa21.11■□□□□ 0.97
GABPB1-212ENST00000615671 NOP56O00567 594 aaKnown RBP21.11■□□□□ 0.97
GABPB1-212ENST00000615671 CFAP58Q5T655 872 aa21.11■□□□□ 0.97
GABPB1-212ENST00000615671 FNBP1Q96RU3 617 aa21.11■□□□□ 0.97
GABPB1-212ENST00000615671 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.11■□□□□ 0.97
GABPB1-212ENST00000615671 AGTPBP1Q9UPW5 1226 aa21.11■□□□□ 0.97
GABPB1-212ENST00000615671 V9GYY5 206 aaPredicted RBP21.11■□□□□ 0.97
GABPB1-212ENST00000615671 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.11■□□□□ 0.973e-6■■□□□ 12.8
GABPB1-212ENST00000615671 TAF5LO75529 589 aa21.11■□□□□ 0.97
GABPB1-212ENST00000615671 PPP2R5CQ13362 524 aa21.11■□□□□ 0.97
GABPB1-212ENST00000615671 BMS1Q14692 1282 aaKnown RBP21.11■□□□□ 0.97
GABPB1-212ENST00000615671 DDX17Q92841 729 aaKnown RBP21.11■□□□□ 0.97
GABPB1-212ENST00000615671 SYT1P21579 422 aa21.1■□□□□ 0.97
GABPB1-212ENST00000615671 TRIM6Q9C030 488 aaPredicted RBP21.1■□□□□ 0.97
GABPB1-212ENST00000615671 TNNQ9UQP3 1299 aa21.1■□□□□ 0.97
GABPB1-212ENST00000615671 PPARDQ03181 441 aa21.1■□□□□ 0.97
GABPB1-212ENST00000615671 CPXCR1Q8N123 301 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms