RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 TDRD7Q8NHU6 1098 aaKnown RBP22.79■■□□□ 1.24
VCX3A-203ENST00000612369 FAM205AQ6ZU69 1335 aa22.79■■□□□ 1.24
VCX3A-203ENST00000612369 FKBP1BP68106 108 aa22.78■■□□□ 1.24
VCX3A-203ENST00000612369 INTS3Q68E01 1043 aaKnown RBP22.78■■□□□ 1.24
VCX3A-203ENST00000612369 CERS5Q8N5B7 392 aa22.78■■□□□ 1.24
VCX3A-203ENST00000612369 VGLL2Q8N8G2 317 aa22.78■■□□□ 1.24
VCX3A-203ENST00000612369 MTMR14Q8NCE2 650 aa22.78■■□□□ 1.24
VCX3A-203ENST00000612369 ZBED3Q96IU2 234 aaPredicted RBP22.78■■□□□ 1.24
VCX3A-203ENST00000612369 FBXO3Q9UK99 471 aa22.78■■□□□ 1.24
VCX3A-203ENST00000612369 GYG1P46976 350 aa22.77■■□□□ 1.24
VCX3A-203ENST00000612369 RFX5P48382 616 aaPredicted RBP22.77■■□□□ 1.24
VCX3A-203ENST00000612369 BEGAINQ9BUH8 593 aa22.77■■□□□ 1.24
VCX3A-203ENST00000612369 PRDM10Q9NQV6 1147 aa22.77■■□□□ 1.24
VCX3A-203ENST00000612369 EYA2O00167 538 aa22.76■■□□□ 1.23
VCX3A-203ENST00000612369 PTPN12Q05209 780 aaKnown RBP22.76■■□□□ 1.23
VCX3A-203ENST00000612369 NOGQ13253 232 aa22.76■■□□□ 1.23
VCX3A-203ENST00000612369 DLGAP5Q15398 846 aa22.76■■□□□ 1.23
VCX3A-203ENST00000612369 CAVIN4Q5BKX8 364 aa22.76■■□□□ 1.23
VCX3A-203ENST00000612369 RGMBQ6NW40 437 aa22.76■■□□□ 1.23
VCX3A-203ENST00000612369 FBXO33Q7Z6M2 555 aa22.76■■□□□ 1.23
VCX3A-203ENST00000612369 VPS37DQ86XT2 251 aa22.76■■□□□ 1.23
VCX3A-203ENST00000612369 APOBEC3FQ8IUX4 373 aaKnown RBP22.76■■□□□ 1.23
VCX3A-203ENST00000612369 KLHDC4Q8TBB5 520 aa22.76■■□□□ 1.23
VCX3A-203ENST00000612369 AOC2O75106 756 aa22.75■■□□□ 1.23
VCX3A-203ENST00000612369 CCDC102AQ96A19 550 aa22.75■■□□□ 1.23
VCX3A-203ENST00000612369 GNAI3P08754 354 aa22.74■■□□□ 1.23
VCX3A-203ENST00000612369 PUM3Q15397 648 aaKnown RBP22.74■■□□□ 1.23
VCX3A-203ENST00000612369 ATF7IPQ6VMQ6 1270 aa22.74■■□□□ 1.23
VCX3A-203ENST00000612369 CIAO1O76071 339 aa22.73■■□□□ 1.23
VCX3A-203ENST00000612369 IFIT1P09914 478 aaKnown RBP22.73■■□□□ 1.23
VCX3A-203ENST00000612369 MFSD14BQ5SR56 506 aa22.73■■□□□ 1.23
VCX3A-203ENST00000612369 MEIS3Q99687 375 aa22.73■■□□□ 1.23
VCX3A-203ENST00000612369 LRRFIP2Q9Y608 721 aaKnown RBP22.73■■□□□ 1.23
VCX3A-203ENST00000612369 F8W031 263 aaPredicted RBP22.72■■□□□ 1.23
VCX3A-203ENST00000612369 CA12O43570 354 aa22.72■■□□□ 1.23
VCX3A-203ENST00000612369 MYO1BO43795 1136 aa22.72■■□□□ 1.23
VCX3A-203ENST00000612369 BCAR3O75815 825 aa22.72■■□□□ 1.23
VCX3A-203ENST00000612369 TRIM27P14373 513 aa22.72■■□□□ 1.23
VCX3A-203ENST00000612369 FGFR2P21802 821 aa22.72■■□□□ 1.23
VCX3A-203ENST00000612369 NF2P35240 595 aa22.72■■□□□ 1.23
VCX3A-203ENST00000612369 ZNF157P51786 506 aaPredicted RBP22.72■■□□□ 1.23
VCX3A-203ENST00000612369 TNS4Q8IZW8 715 aa22.72■■□□□ 1.23
VCX3A-203ENST00000612369 JAG2Q9Y219 1238 aa22.72■■□□□ 1.23
VCX3A-203ENST00000612369 PAPPA2Q9BXP8 1791 aa22.71■■□□□ 1.23
VCX3A-203ENST00000612369 CFAP100Q494V2 611 aa22.71■■□□□ 1.23
VCX3A-203ENST00000612369 ATG9AQ7Z3C6 839 aa22.71■■□□□ 1.23
VCX3A-203ENST00000612369 TBC1D22AQ8WUA7 517 aa22.71■■□□□ 1.23
VCX3A-203ENST00000612369 LPIN2Q92539 896 aa22.71■■□□□ 1.23
VCX3A-203ENST00000612369 FRAT1Q92837 279 aaPredicted RBP22.71■■□□□ 1.23
VCX3A-203ENST00000612369 COL1A1P02452 1464 aaPredicted RBP22.71■■□□□ 1.23
VCX3A-203ENST00000612369 SPDYE2BA6NHP3 402 aa22.7■■□□□ 1.22
VCX3A-203ENST00000612369 FAM155AB1AL88 458 aaPredicted RBP22.7■■□□□ 1.22
VCX3A-203ENST00000612369 FRAT2O75474 233 aaPredicted RBP22.7■■□□□ 1.22
VCX3A-203ENST00000612369 SPDYE6P0CI01 402 aa22.7■■□□□ 1.22
VCX3A-203ENST00000612369 HSPA8P11142 646 aaKnown RBP22.7■■□□□ 1.22
VCX3A-203ENST00000612369 LBX1P52954 281 aa22.7■■□□□ 1.22
VCX3A-203ENST00000612369 COPRSQ9NQ92 184 aa22.7■■□□□ 1.22
VCX3A-203ENST00000612369 SERPINA10Q9UK55 444 aa22.7■■□□□ 1.22
VCX3A-203ENST00000612369 SCAF8Q9UPN6 1271 aaKnown RBP22.7■■□□□ 1.22
VCX3A-203ENST00000612369 ZBED9Q6R2W3 1325 aa22.7■■□□□ 1.22
VCX3A-203ENST00000612369 SLC5A1P13866 664 aa22.69■■□□□ 1.22
VCX3A-203ENST00000612369 CEP126Q9P2H0 1117 aa22.69■■□□□ 1.22
VCX3A-203ENST00000612369 TTF2Q9UNY4 1162 aaKnown RBP22.69■■□□□ 1.22
VCX3A-203ENST00000612369 PPP2R3BQ9Y5P8 575 aa22.69■■□□□ 1.22
VCX3A-203ENST00000612369 ECM29Q5VYK3 1845 aa22.68■■□□□ 1.22
VCX3A-203ENST00000612369 SLC10A3P09131 477 aa22.68■■□□□ 1.22
VCX3A-203ENST00000612369 IL15P40933 162 aaPredicted RBP22.68■■□□□ 1.22
VCX3A-203ENST00000612369 RBM5P52756 815 aaKnown RBP eCLIP22.68■■□□□ 1.22
VCX3A-203ENST00000612369 ZKSCAN2Q63HK3 967 aa22.68■■□□□ 1.22
VCX3A-203ENST00000612369 PRMT6Q96LA8 375 aaPredicted RBP22.68■■□□□ 1.22
VCX3A-203ENST00000612369 BCAMP50895 628 aa22.67■■□□□ 1.22
VCX3A-203ENST00000612369 MTX1Q13505 466 aa22.67■■□□□ 1.22
VCX3A-203ENST00000612369 PRAMEF18Q5VWM3 479 aa22.67■■□□□ 1.22
VCX3A-203ENST00000612369 SIL1Q9H173 461 aa22.67■■□□□ 1.22
VCX3A-203ENST00000612369 DEFB129Q9H1M3 183 aa22.67■■□□□ 1.22
VCX3A-203ENST00000612369 ARAP2Q8WZ64 1704 aa22.67■■□□□ 1.22
VCX3A-203ENST00000612369 HDLBPQ00341 1268 aaKnown RBP22.66■■□□□ 1.22
VCX3A-203ENST00000612369 REM2Q8IYK8 340 aaPredicted RBP22.66■■□□□ 1.22
VCX3A-203ENST00000612369 IQSEC3Q9UPP2 1182 aaPredicted RBP22.66■■□□□ 1.22
VCX3A-203ENST00000612369 SUGT1Q9Y2Z0 365 aa22.66■■□□□ 1.22
VCX3A-203ENST00000612369 CHAF1AQ13111 956 aaPredicted RBP22.65■■□□□ 1.22
VCX3A-203ENST00000612369 TTLL12Q14166 644 aaPredicted RBP22.65■■□□□ 1.22
VCX3A-203ENST00000612369 ARMC9Q7Z3E5 817 aa22.65■■□□□ 1.22
VCX3A-203ENST00000612369 ZIC5Q96T25 663 aa22.65■■□□□ 1.22
VCX3A-203ENST00000612369 MRIQ9BWK5 157 aa22.65■■□□□ 1.22
VCX3A-203ENST00000612369 PCDHAC2Q9Y5I4 1007 aa22.65■■□□□ 1.22
VCX3A-203ENST00000612369 SRGAP3O43295 1099 aa22.64■■□□□ 1.21
VCX3A-203ENST00000612369 GNAI2P04899 355 aa22.64■■□□□ 1.21
VCX3A-203ENST00000612369 KIF23Q02241 960 aaPredicted RBP22.64■■□□□ 1.21
VCX3A-203ENST00000612369 ATP2B3Q16720 1220 aa22.64■■□□□ 1.21
VCX3A-203ENST00000612369 CLUAP1Q96AJ1 413 aa22.64■■□□□ 1.21
VCX3A-203ENST00000612369 CLRN2A0PK11 232 aa22.63■■□□□ 1.21
VCX3A-203ENST00000612369 UBE2Q2LH0YL09 131 aa22.63■■□□□ 1.21
VCX3A-203ENST00000612369 CRKP46108 304 aa22.63■■□□□ 1.21
VCX3A-203ENST00000612369 TNFAIP1Q13829 316 aa22.63■■□□□ 1.21
VCX3A-203ENST00000612369 MOB2Q70IA6 237 aa22.63■■□□□ 1.21
VCX3A-203ENST00000612369 RASAL3Q86YV0 1011 aa22.63■■□□□ 1.21
VCX3A-203ENST00000612369 GNL3LQ9NVN8 582 aaKnown RBP22.63■■□□□ 1.21
VCX3A-203ENST00000612369 PA2G4Q9UQ80 394 aaKnown RBP22.63■■□□□ 1.21
VCX3A-203ENST00000612369 TNNQ9UQP3 1299 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms