RNA–Protein interactions for RNA: ENST00000611016.2

TNXB-208, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,083 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-208ENST00000611016 DHX58Q96C10 678 aa17.77■□□□□ 0.44
TNXB-208ENST00000611016 TTC12Q9H892 705 aaPredicted RBP17.77■□□□□ 0.44
TNXB-208ENST00000611016 ZBTB21Q9ULJ3 1066 aa17.77■□□□□ 0.44
TNXB-208ENST00000611016 MBD4O95243 580 aa17.77■□□□□ 0.44
TNXB-208ENST00000611016 RXRAP19793 462 aa17.77■□□□□ 0.44
TNXB-208ENST00000611016 TTC6Q86TZ1 520 aa17.77■□□□□ 0.44
TNXB-208ENST00000611016 AKR1B10O60218 316 aa17.77■□□□□ 0.43
TNXB-208ENST00000611016 ZKSCAN3Q9BRR0 538 aa17.77■□□□□ 0.43
TNXB-208ENST00000611016 SNW1Q13573 536 aaKnown RBP17.77■□□□□ 0.43
TNXB-208ENST00000611016 TEX11Q8IYF3 940 aa17.77■□□□□ 0.43
TNXB-208ENST00000611016 DDX17Q92841 729 aaKnown RBP17.77■□□□□ 0.43
TNXB-208ENST00000611016 COMMD10Q9Y6G5 202 aa17.77■□□□□ 0.43
TNXB-208ENST00000611016 RAB3GAP1Q15042 981 aa17.76■□□□□ 0.43
TNXB-208ENST00000611016 KRT79Q5XKE5 535 aa17.76■□□□□ 0.43
TNXB-208ENST00000611016 SH3TC1Q8TE82 1336 aa17.76■□□□□ 0.43
TNXB-208ENST00000611016 HIBADHP31937 336 aaKnown RBP17.76■□□□□ 0.43
TNXB-208ENST00000611016 PRIM1P49642 420 aaKnown RBP17.76■□□□□ 0.43
TNXB-208ENST00000611016 UBASH3AP57075 661 aa17.76■□□□□ 0.43
TNXB-208ENST00000611016 LRRC45Q96CN5 670 aa17.76■□□□□ 0.43
TNXB-208ENST00000611016 JADE2Q9NQC1 790 aa17.76■□□□□ 0.43
TNXB-208ENST00000611016 CALCOCO1Q9P1Z2 691 aa17.76■□□□□ 0.43
TNXB-208ENST00000611016 ABCC2Q92887 1545 aa17.76■□□□□ 0.43
TNXB-208ENST00000611016 G2E3Q7L622 706 aa17.75■□□□□ 0.43
TNXB-208ENST00000611016 MCM7P33993 719 aa17.75■□□□□ 0.43
TNXB-208ENST00000611016 CYLC1P35663 651 aaPredicted RBP17.75■□□□□ 0.43
TNXB-208ENST00000611016 METTL22Q9BUU2 404 aaPredicted RBP17.75■□□□□ 0.43
TNXB-208ENST00000611016 TIMM10P62072 90 aa17.75■□□□□ 0.43
TNXB-208ENST00000611016 MAP3K9P80192 1104 aa17.75■□□□□ 0.43
TNXB-208ENST00000611016 USP48Q86UV5 1035 aa17.75■□□□□ 0.43
TNXB-208ENST00000611016 SP4Q02446 784 aa17.75■□□□□ 0.43
TNXB-208ENST00000611016 SPECC1Q5M775 1068 aa17.75■□□□□ 0.43
TNXB-208ENST00000611016 SPECC1LQ69YQ0 1117 aa17.75■□□□□ 0.43
TNXB-208ENST00000611016 SNX21Q969T3 373 aa17.75■□□□□ 0.43
TNXB-208ENST00000611016 SBNO1A3KN83 1393 aa17.75■□□□□ 0.43
TNXB-208ENST00000611016 RAD50Q92878 1312 aa17.75■□□□□ 0.43
TNXB-208ENST00000611016 PSMA7O14818 248 aa17.75■□□□□ 0.43
TNXB-208ENST00000611016 PARP1P09874 1014 aaKnown RBP17.75■□□□□ 0.43
TNXB-208ENST00000611016 RLBP1P12271 317 aa17.75■□□□□ 0.43
TNXB-208ENST00000611016 FAM212AQ96EL1 285 aa17.75■□□□□ 0.43
TNXB-208ENST00000611016 CCDC175P0C221 793 aa17.74■□□□□ 0.43
TNXB-208ENST00000611016 GNA11P29992 359 aa17.74■□□□□ 0.43
TNXB-208ENST00000611016 NCBP1Q09161 790 aaKnown RBP17.74■□□□□ 0.43
TNXB-208ENST00000611016 WDR62O43379 1518 aa17.74■□□□□ 0.43
TNXB-208ENST00000611016 A0A1B0GUL7 405 aa17.74■□□□□ 0.43
TNXB-208ENST00000611016 FAM13AO94988 1023 aa17.74■□□□□ 0.43
TNXB-208ENST00000611016 LRSAM1Q6UWE0 723 aa17.74■□□□□ 0.43
TNXB-208ENST00000611016 TTC16Q8NEE8 873 aa17.74■□□□□ 0.43
TNXB-208ENST00000611016 GGA1Q9UJY5 639 aa17.74■□□□□ 0.43
TNXB-208ENST00000611016 PDE8AO60658 829 aa17.74■□□□□ 0.43
TNXB-208ENST00000611016 LGR6Q9HBX8 967 aa17.74■□□□□ 0.43
TNXB-208ENST00000611016 ATP10AO60312 1499 aa17.74■□□□□ 0.43
TNXB-208ENST00000611016 EYA2O00167 538 aa17.74■□□□□ 0.43
TNXB-208ENST00000611016 F13A1P00488 732 aa17.74■□□□□ 0.43
TNXB-208ENST00000611016 AK2P54819 239 aa17.74■□□□□ 0.43
TNXB-208ENST00000611016 DNM1Q05193 864 aaKnown RBP17.74■□□□□ 0.43
TNXB-208ENST00000611016 ZSCAN23Q3MJ62 389 aa17.74■□□□□ 0.43
TNXB-208ENST00000611016 DHX32Q7L7V1 743 aaKnown RBP17.74■□□□□ 0.43
TNXB-208ENST00000611016 MRVI1Q9Y6F6 885 aa17.74■□□□□ 0.43
TNXB-208ENST00000611016 FSD2A1L4K1 749 aa17.73■□□□□ 0.43
TNXB-208ENST00000611016 SPTLC2O15270 562 aa17.73■□□□□ 0.43
TNXB-208ENST00000611016 POLR3GO15318 223 aaPredicted RBP17.73■□□□□ 0.43
TNXB-208ENST00000611016 A1BGP04217 495 aa17.73■□□□□ 0.43
TNXB-208ENST00000611016 ACTN2P35609 894 aa17.73■□□□□ 0.43
TNXB-208ENST00000611016 PUM3Q15397 648 aaKnown RBP17.73■□□□□ 0.43
TNXB-208ENST00000611016 LMAN1P49257 510 aa17.73■□□□□ 0.43
TNXB-208ENST00000611016 ANO6Q4KMQ2 910 aa17.73■□□□□ 0.43
TNXB-208ENST00000611016 FMNL3Q8IVF7 1028 aa17.73■□□□□ 0.43
TNXB-208ENST00000611016 PSMD1Q99460 953 aa17.73■□□□□ 0.43
TNXB-208ENST00000611016 SLC52A2Q9HAB3 445 aa17.73■□□□□ 0.43
TNXB-208ENST00000611016 BMS1Q14692 1282 aaKnown RBP17.73■□□□□ 0.43
TNXB-208ENST00000611016 RGS22Q8NE09 1264 aa17.73■□□□□ 0.43
TNXB-208ENST00000611016 NAP1L4Q99733 375 aaKnown RBP17.73■□□□□ 0.43
TNXB-208ENST00000611016 ZNF354CQ86Y25 554 aa17.72■□□□□ 0.43
TNXB-208ENST00000611016 IMPG2Q9BZV3 1241 aa17.72■□□□□ 0.43
TNXB-208ENST00000611016 CCDC24Q8N4L8 307 aa17.72■□□□□ 0.43
TNXB-208ENST00000611016 HELLSQ9NRZ9 838 aa17.72■□□□□ 0.43
TNXB-208ENST00000611016 CCDC87Q9NVE4 849 aa17.72■□□□□ 0.43
TNXB-208ENST00000611016 USP21Q9UK80 565 aa17.72■□□□□ 0.43
TNXB-208ENST00000611016 MAPKBP1O60336 1514 aa17.72■□□□□ 0.43
TNXB-208ENST00000611016 SRRTQ9BXP5 876 aaKnown RBP17.72■□□□□ 0.43
TNXB-208ENST00000611016 UBE4AQ14139 1066 aa17.72■□□□□ 0.43
TNXB-208ENST00000611016 ZNF594Q96JF6 807 aaPredicted RBP17.72■□□□□ 0.43
TNXB-208ENST00000611016 SH2D4AQ9H788 454 aa17.72■□□□□ 0.43
TNXB-208ENST00000611016 PTPDC1A2A3K4 754 aa17.72■□□□□ 0.43
TNXB-208ENST00000611016 BACH1O14867 736 aa17.72■□□□□ 0.43
TNXB-208ENST00000611016 IL13P35225 146 aa17.72■□□□□ 0.43
TNXB-208ENST00000611016 RUFY3Q7L099 469 aa17.72■□□□□ 0.43
TNXB-208ENST00000611016 DPH6Q7L8W6 267 aa17.72■□□□□ 0.43
TNXB-208ENST00000611016 PPM1EQ8WY54 764 aa17.72■□□□□ 0.43
TNXB-208ENST00000611016 TSNARE1Q96NA8 513 aa17.72■□□□□ 0.43
TNXB-208ENST00000611016 GPCPD1Q9NPB8 672 aa17.72■□□□□ 0.43
TNXB-208ENST00000611016 ZBTB40Q9NUA8 1239 aa17.72■□□□□ 0.43
TNXB-208ENST00000611016 RBM28Q9NW13 759 aaKnown RBP17.72■□□□□ 0.43
TNXB-208ENST00000611016 TCOF1Q13428 1488 aaKnown RBP17.72■□□□□ 0.43
TNXB-208ENST00000611016 ZNF408Q9H9D4 720 aa17.71■□□□□ 0.43
TNXB-208ENST00000611016 DACT1Q9NYF0 836 aa17.71■□□□□ 0.43
TNXB-208ENST00000611016 H0YIN7 160 aa17.71■□□□□ 0.43
TNXB-208ENST00000611016 CEP112Q8N8E3 955 aa17.71■□□□□ 0.43
TNXB-208ENST00000611016 SREK1Q8WXA9 508 aaKnown RBP17.71■□□□□ 0.43
TNXB-208ENST00000611016 PICK1Q9NRD5 415 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms