RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 HEATR3Q7Z4Q2 680 aa8.4□□□□□ -1.06
CSDE1-218ENST00000610726 GGA1Q9UJY5 639 aa8.4□□□□□ -1.06
CSDE1-218ENST00000610726 QRICH2Q9H0J4 1663 aa8.4□□□□□ -1.06
CSDE1-218ENST00000610726 HEG1Q9ULI3 1381 aa8.4□□□□□ -1.06
CSDE1-218ENST00000610726 NEXMIFQ5QGS0 1516 aa8.4□□□□□ -1.06
CSDE1-218ENST00000610726 MROH5Q6ZUA9 1318 aa8.4□□□□□ -1.06
CSDE1-218ENST00000610726 TEX11Q8IYF3 940 aa8.4□□□□□ -1.06
CSDE1-218ENST00000610726 SETBP1Q9Y6X0 1596 aa8.4□□□□□ -1.07
CSDE1-218ENST00000610726 CTAGE5O15320 804 aa8.4□□□□□ -1.07
CSDE1-218ENST00000610726 MYO1BO43795 1136 aa8.4□□□□□ -1.07
CSDE1-218ENST00000610726 IDEP14735 1019 aa8.4□□□□□ -1.07
CSDE1-218ENST00000610726 ADORA1P30542 326 aa8.4□□□□□ -1.07
CSDE1-218ENST00000610726 HSP90AA2PQ14568 343 aaPredicted RBP8.4□□□□□ -1.07
CSDE1-218ENST00000610726 CCDC70Q6NSX1 233 aa8.4□□□□□ -1.07
CSDE1-218ENST00000610726 CCDC12Q8WUD4 166 aaPredicted RBP8.4□□□□□ -1.07
CSDE1-218ENST00000610726 TRIM37O94972 964 aa8.39□□□□□ -1.07
CSDE1-218ENST00000610726 CT47A1Q5JQC4 288 aaPredicted RBP8.39□□□□□ -1.07
CSDE1-218ENST00000610726 CCDC102BQ68D86 513 aa8.39□□□□□ -1.07
CSDE1-218ENST00000610726 OTUD7BQ6GQQ9 843 aa8.39□□□□□ -1.07
CSDE1-218ENST00000610726 MYL10Q9BUA6 226 aa8.39□□□□□ -1.07
CSDE1-218ENST00000610726 ZNHIT6Q9NWK9 470 aaKnown RBP8.39□□□□□ -1.07
CSDE1-218ENST00000610726 STK32BQ9NY57 414 aa8.39□□□□□ -1.07
CSDE1-218ENST00000610726 CBFA2T2O43439 604 aa8.39□□□□□ -1.07
CSDE1-218ENST00000610726 SYKP43405 635 aa8.39□□□□□ -1.07
CSDE1-218ENST00000610726 CTDSPL2Q05D32 466 aa8.39□□□□□ -1.07
CSDE1-218ENST00000610726 FAM196AQ6ZSG2 479 aa8.39□□□□□ -1.07
CSDE1-218ENST00000610726 GOLGA6L1Q8N7Z2 621 aa8.39□□□□□ -1.07
CSDE1-218ENST00000610726 EYA3Q99504 573 aa8.39□□□□□ -1.07
CSDE1-218ENST00000610726 SEC31BQ9NQW1 1179 aa8.39□□□□□ -1.07
CSDE1-218ENST00000610726 TCP11L1Q9NUJ3 509 aa8.39□□□□□ -1.07
CSDE1-218ENST00000610726 TRPC5Q9UL62 973 aaPredicted RBP8.39□□□□□ -1.07
CSDE1-218ENST00000610726 PLCG2P16885 1265 aa8.39□□□□□ -1.07
CSDE1-218ENST00000610726 NBPF14Q5TI25 921 aa8.39□□□□□ -1.07
CSDE1-218ENST00000610726 CUL5Q93034 780 aa8.39□□□□□ -1.07
CSDE1-218ENST00000610726 RAB34Q9BZG1 259 aa8.39□□□□□ -1.07
CSDE1-218ENST00000610726 USP31Q70CQ4 1352 aa8.39□□□□□ -1.07
CSDE1-218ENST00000610726 IGKV5-2P06315 115 aa8.38□□□□□ -1.07
CSDE1-218ENST00000610726 PHKA1P46020 1223 aa8.38□□□□□ -1.07
CSDE1-218ENST00000610726 TMEM266Q2M3C6 531 aa8.38□□□□□ -1.07
CSDE1-218ENST00000610726 HDAC9Q9UKV0 1011 aa8.38□□□□□ -1.07
CSDE1-218ENST00000610726 PDE8BO95263 885 aa8.38□□□□□ -1.07
CSDE1-218ENST00000610726 EIF5P55010 431 aaKnown RBP8.38□□□□□ -1.07
CSDE1-218ENST00000610726 DPP8Q6V1X1 898 aaPredicted RBP8.38□□□□□ -1.07
CSDE1-218ENST00000610726 UBA5Q9GZZ9 404 aa8.38□□□□□ -1.07
CSDE1-218ENST00000610726 ANGEL1Q9UNK9 670 aaKnown RBP8.38□□□□□ -1.07
CSDE1-218ENST00000610726 GNAQP50148 359 aa8.38□□□□□ -1.07
CSDE1-218ENST00000610726 PTPN12Q05209 780 aaKnown RBP8.38□□□□□ -1.07
CSDE1-218ENST00000610726 HSP90AA4PQ58FG1 418 aa8.38□□□□□ -1.07
CSDE1-218ENST00000610726 EPHA10Q5JZY3 1008 aa8.38□□□□□ -1.07
CSDE1-218ENST00000610726 NLRP10Q86W26 655 aa8.38□□□□□ -1.07
CSDE1-218ENST00000610726 KCNG4Q8TDN1 519 aa8.38□□□□□ -1.07
CSDE1-218ENST00000610726 JDP2Q8WYK2 163 aa8.38□□□□□ -1.07
CSDE1-218ENST00000610726 DEF6Q9H4E7 631 aa8.38□□□□□ -1.07
CSDE1-218ENST00000610726 STAP2Q9UGK3 403 aa8.38□□□□□ -1.07
CSDE1-218ENST00000610726 AGLP35573 1532 aa8.38□□□□□ -1.07
CSDE1-218ENST00000610726 SPTLC2O15270 562 aa8.38□□□□□ -1.07
CSDE1-218ENST00000610726 AFMP43652 599 aa8.38□□□□□ -1.07
CSDE1-218ENST00000610726 NAPAP54920 295 aa8.38□□□□□ -1.07
CSDE1-218ENST00000610726 EIF6P56537 245 aaKnown RBP8.38□□□□□ -1.07
CSDE1-218ENST00000610726 CHRNDQ07001 517 aa8.38□□□□□ -1.07
CSDE1-218ENST00000610726 ZFYVE27Q5T4F4 411 aa8.38□□□□□ -1.07
CSDE1-218ENST00000610726 PI16Q6UXB8 463 aa8.38□□□□□ -1.07
CSDE1-218ENST00000610726 MRPS27Q92552 414 aaKnown RBP8.38□□□□□ -1.07
CSDE1-218ENST00000610726 HAUS7Q99871 368 aa8.38□□□□□ -1.07
CSDE1-218ENST00000610726 C1orf167Q5SNV9 1468 aa8.37□□□□□ -1.07
CSDE1-218ENST00000610726 JAK2O60674 1132 aa8.37□□□□□ -1.07
CSDE1-218ENST00000610726 SASH1O94885 1247 aa8.37□□□□□ -1.07
CSDE1-218ENST00000610726 POLD1P28340 1107 aa8.37□□□□□ -1.07
CSDE1-218ENST00000610726 HLFQ16534 295 aa8.37□□□□□ -1.07
CSDE1-218ENST00000610726 ZSCAN30Q86W11 494 aa8.37□□□□□ -1.07
CSDE1-218ENST00000610726 RASEFQ8IZ41 740 aa8.37□□□□□ -1.07
CSDE1-218ENST00000610726 WDR66Q8TBY9 1149 aa8.37□□□□□ -1.07
CSDE1-218ENST00000610726 CDC42BPGQ6DT37 1551 aa8.37□□□□□ -1.07
CSDE1-218ENST00000610726 E7EWF7 191 aa8.37□□□□□ -1.07
CSDE1-218ENST00000610726 PDE6AP16499 860 aa8.37□□□□□ -1.07
CSDE1-218ENST00000610726 SFPQP23246 707 aaKnown RBP eCLIP8.37□□□□□ -1.07
CSDE1-218ENST00000610726 NOM1Q5C9Z4 860 aaKnown RBP8.37□□□□□ -1.07
CSDE1-218ENST00000610726 LRSAM1Q6UWE0 723 aa8.37□□□□□ -1.07
CSDE1-218ENST00000610726 SYNE4Q8N205 404 aa8.37□□□□□ -1.07
CSDE1-218ENST00000610726 ANTXR1Q9H6X2 564 aa8.37□□□□□ -1.07
CSDE1-218ENST00000610726 ADCY5O95622 1261 aa8.37□□□□□ -1.07
CSDE1-218ENST00000610726 CPLX3Q8WVH0 158 aa8.37□□□□□ -1.07
CSDE1-218ENST00000610726 OSBPL3Q9H4L5 887 aa8.37□□□□□ -1.07
CSDE1-218ENST00000610726 ATG3Q9NT62 314 aa8.37□□□□□ -1.07
CSDE1-218ENST00000610726 CLIP2Q9UDT6 1046 aa8.37□□□□□ -1.07
CSDE1-218ENST00000610726 PIK3C2BO00750 1634 aa8.37□□□□□ -1.07
CSDE1-218ENST00000610726 CPS1P31327 1500 aa8.37□□□□□ -1.07
CSDE1-218ENST00000610726 TRIM75PA6NK02 468 aa8.36□□□□□ -1.07
CSDE1-218ENST00000610726 H0YIN7 160 aa8.36□□□□□ -1.07
CSDE1-218ENST00000610726 HSPD1P10809 573 aaKnown RBP8.36□□□□□ -1.07
CSDE1-218ENST00000610726 STX1AQ16623 288 aa8.36□□□□□ -1.07
CSDE1-218ENST00000610726 CCDC178Q5BJE1 867 aa8.36□□□□□ -1.07
CSDE1-218ENST00000610726 MAPKAPK5Q8IW41 473 aa8.36□□□□□ -1.07
CSDE1-218ENST00000610726 CAGE1Q8TC20 777 aa8.36□□□□□ -1.07
CSDE1-218ENST00000610726 PHKBQ93100 1093 aa8.36□□□□□ -1.07
CSDE1-218ENST00000610726 SRP68Q9UHB9 627 aaKnown RBP8.36□□□□□ -1.07
CSDE1-218ENST00000610726 LRRC7Q96NW7 1537 aa8.36□□□□□ -1.07
CSDE1-218ENST00000610726 TNS3Q68CZ2 1445 aa8.36□□□□□ -1.07
CSDE1-218ENST00000610726 CALM1P0DP23 149 aa8.36□□□□□ -1.07
CSDE1-218ENST00000610726 CALM2P0DP24 149 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms