RNA–Protein interactions for RNA: ENST00000608461.1

HDDC2-206, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-206ENST00000608461 CEP85Q6P2H3 762 aa17.67■□□□□ 0.42
HDDC2-206ENST00000608461 TRPM4Q8TD43 1214 aa17.67■□□□□ 0.42
HDDC2-206ENST00000608461 GNL3LQ9NVN8 582 aaKnown RBP17.67■□□□□ 0.42
HDDC2-206ENST00000608461 SHTN1A0MZ66 631 aa17.66■□□□□ 0.42
HDDC2-206ENST00000608461 SEMA3EO15041 775 aa17.66■□□□□ 0.42
HDDC2-206ENST00000608461 FRAT2O75474 233 aaPredicted RBP17.66■□□□□ 0.42
HDDC2-206ENST00000608461 TBC1D10BQ4KMP7 808 aaPredicted RBP17.66■□□□□ 0.42
HDDC2-206ENST00000608461 CDC37L1Q7L3B6 337 aa17.66■□□□□ 0.42
HDDC2-206ENST00000608461 C1orf115Q9H7X2 142 aa17.66■□□□□ 0.42
HDDC2-206ENST00000608461 GPR108Q9NPR9 543 aa17.66■□□□□ 0.42
HDDC2-206ENST00000608461 HMMRO75330 724 aa17.65■□□□□ 0.42
HDDC2-206ENST00000608461 BCAMP50895 628 aa17.65■□□□□ 0.42
HDDC2-206ENST00000608461 TFCP2Q12800 502 aa17.65■□□□□ 0.42
HDDC2-206ENST00000608461 DCPSQ96C86 337 aaKnown RBP17.65■□□□□ 0.42
HDDC2-206ENST00000608461 SUGT1Q9Y2Z0 365 aa17.65■□□□□ 0.42
HDDC2-206ENST00000608461 PITPNM2Q9BZ72 1349 aa17.65■□□□□ 0.42
HDDC2-206ENST00000608461 ARAP2Q8WZ64 1704 aa17.64■□□□□ 0.41
HDDC2-206ENST00000608461 SURF6O75683 361 aaKnown RBP17.64■□□□□ 0.41
HDDC2-206ENST00000608461 HSP90AB4PQ58FF6 505 aa17.64■□□□□ 0.41
HDDC2-206ENST00000608461 MFSD14BQ5SR56 506 aa17.64■□□□□ 0.41
HDDC2-206ENST00000608461 RBM26Q5T8P6 1007 aaKnown RBP17.64■□□□□ 0.41
HDDC2-206ENST00000608461 KIAA0825Q8IV33 1275 aa17.64■□□□□ 0.41
HDDC2-206ENST00000608461 MTMR14Q8NCE2 650 aa17.64■□□□□ 0.41
HDDC2-206ENST00000608461 CREBZFQ9NS37 354 aa17.64■□□□□ 0.41
HDDC2-206ENST00000608461 A0A1B0GUL7 405 aa17.63■□□□□ 0.41
HDDC2-206ENST00000608461 EGFRP00533 1210 aa17.63■□□□□ 0.41
HDDC2-206ENST00000608461 RRP1P56182 461 aaKnown RBP17.63■□□□□ 0.41
HDDC2-206ENST00000608461 C20orf194Q5TEA3 1177 aa17.63■□□□□ 0.41
HDDC2-206ENST00000608461 ERC1Q8IUD2 1116 aa17.63■□□□□ 0.41
HDDC2-206ENST00000608461 CERS5Q8N5B7 392 aa17.63■□□□□ 0.41
HDDC2-206ENST00000608461 WDR66Q8TBY9 1149 aa17.63■□□□□ 0.41
HDDC2-206ENST00000608461 MXD3Q9BW11 206 aa17.63■□□□□ 0.41
HDDC2-206ENST00000608461 TMEM88BA6NKF7 163 aa17.62■□□□□ 0.41
HDDC2-206ENST00000608461 TIMM10P62072 90 aa17.62■□□□□ 0.41
HDDC2-206ENST00000608461 HDLBPQ00341 1268 aaKnown RBP17.62■□□□□ 0.41
HDDC2-206ENST00000608461 OS9Q13438 667 aaPredicted RBP17.62■□□□□ 0.41
HDDC2-206ENST00000608461 SCARF1Q14162 830 aa17.62■□□□□ 0.41
HDDC2-206ENST00000608461 MRIQ9BWK5 157 aa17.62■□□□□ 0.41
HDDC2-206ENST00000608461 DENND2AQ9ULE3 1009 aa17.62■□□□□ 0.41
HDDC2-206ENST00000608461 PDS5AQ29RF7 1337 aaKnown RBP17.62■□□□□ 0.41
HDDC2-206ENST00000608461 MYH13Q9UKX3 1938 aa17.61■□□□□ 0.41
HDDC2-206ENST00000608461 WNT10BO00744 389 aa17.61■□□□□ 0.41
HDDC2-206ENST00000608461 CCDC102BQ68D86 513 aa17.61■□□□□ 0.41
HDDC2-206ENST00000608461 XAGE2Q96GT9 111 aa17.61■□□□□ 0.41
HDDC2-206ENST00000608461 ZBED3Q96IU2 234 aaPredicted RBP17.61■□□□□ 0.41
HDDC2-206ENST00000608461 SERPINA10Q9UK55 444 aa17.61■□□□□ 0.41
HDDC2-206ENST00000608461 DLGAP5Q15398 846 aa17.6■□□□□ 0.41
HDDC2-206ENST00000608461 KRT26Q7Z3Y9 468 aa17.6■□□□□ 0.41
HDDC2-206ENST00000608461 SULF1Q8IWU6 871 aa17.6■□□□□ 0.41
HDDC2-206ENST00000608461 ZGPATQ8N5A5 531 aaKnown RBP17.6■□□□□ 0.41
HDDC2-206ENST00000608461 NEUROD6Q96NK8 337 aa17.6■□□□□ 0.41
HDDC2-206ENST00000608461 MAST3O60307 1309 aa17.6■□□□□ 0.41
HDDC2-206ENST00000608461 TRPM7Q96QT4 1865 aa17.6■□□□□ 0.41
HDDC2-206ENST00000608461 CEP350Q5VT06 3117 aa17.59■□□□□ 0.41
HDDC2-206ENST00000608461 SALL1Q9NSC2 1324 aa17.59■□□□□ 0.41
HDDC2-206ENST00000608461 MYO1BO43795 1136 aa17.59■□□□□ 0.41
HDDC2-206ENST00000608461 AAMPQ13685 434 aa17.59■□□□□ 0.41
HDDC2-206ENST00000608461 ANGEL2Q5VTE6 544 aaKnown RBP17.59■□□□□ 0.41
HDDC2-206ENST00000608461 GGA3Q9NZ52 723 aa17.59■□□□□ 0.41
HDDC2-206ENST00000608461 TTF2Q9UNY4 1162 aaKnown RBP17.59■□□□□ 0.41
HDDC2-206ENST00000608461 IQSEC3Q9UPP2 1182 aaPredicted RBP17.59■□□□□ 0.41
HDDC2-206ENST00000608461 PHKA1P46020 1223 aa17.58■□□□□ 0.4
HDDC2-206ENST00000608461 CHAF1AQ13111 956 aaPredicted RBP17.58■□□□□ 0.4
HDDC2-206ENST00000608461 NBPF9Q3BBW0 867 aa17.58■□□□□ 0.4
HDDC2-206ENST00000608461 TNNI3KQ59H18 835 aa17.58■□□□□ 0.4
HDDC2-206ENST00000608461 GORABQ5T7V8 394 aa17.58■□□□□ 0.4
HDDC2-206ENST00000608461 DNAJC5GQ8N7S2 189 aa17.58■□□□□ 0.4
HDDC2-206ENST00000608461 GLIS2Q9BZE0 524 aaPredicted RBP17.58■□□□□ 0.4
HDDC2-206ENST00000608461 JAG2Q9Y219 1238 aa17.58■□□□□ 0.4
HDDC2-206ENST00000608461 FPGT-TNNI3KV9GXZ4 949 aa17.58■□□□□ 0.4
HDDC2-206ENST00000608461 POLR2AP24928 1970 aaKnown RBP17.58■□□□□ 0.4
HDDC2-206ENST00000608461 ECM29Q5VYK3 1845 aa17.57■□□□□ 0.4
HDDC2-206ENST00000608461 RAB11FIP3O75154 756 aa17.57■□□□□ 0.4
HDDC2-206ENST00000608461 UQCRFS1P1P0C7P4 283 aa17.57■□□□□ 0.4
HDDC2-206ENST00000608461 ADORA1P30542 326 aa17.57■□□□□ 0.4
HDDC2-206ENST00000608461 CFAP100Q494V2 611 aa17.57■□□□□ 0.4
HDDC2-206ENST00000608461 USP48Q86UV5 1035 aa17.57■□□□□ 0.4
HDDC2-206ENST00000608461 APOBEC3FQ8IUX4 373 aaKnown RBP17.57■□□□□ 0.4
HDDC2-206ENST00000608461 SIRT2Q8IXJ6 389 aa17.57■□□□□ 0.4
HDDC2-206ENST00000608461 SPDYE2BA6NHP3 402 aa17.56■□□□□ 0.4
HDDC2-206ENST00000608461 F8W031 263 aaPredicted RBP17.56■□□□□ 0.4
HDDC2-206ENST00000608461 IGSF3O75054 1194 aa17.56■□□□□ 0.4
HDDC2-206ENST00000608461 SPDYE6P0CI01 402 aa17.56■□□□□ 0.4
HDDC2-206ENST00000608461 ARID4AP29374 1257 aaPredicted RBP17.56■□□□□ 0.4
HDDC2-206ENST00000608461 CCDC158Q5M9N0 1113 aa17.56■□□□□ 0.4
HDDC2-206ENST00000608461 KIF1BPQ96EK5 621 aa17.56■□□□□ 0.4
HDDC2-206ENST00000608461 ZNF512BQ96KM6 892 aaPredicted RBP17.56■□□□□ 0.4
HDDC2-206ENST00000608461 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.56■□□□□ 0.4
HDDC2-206ENST00000608461 COL1A1P02452 1464 aaPredicted RBP17.56■□□□□ 0.4
HDDC2-206ENST00000608461 TRAF5O00463 557 aa17.55■□□□□ 0.4
HDDC2-206ENST00000608461 RBM5P52756 815 aaKnown RBP eCLIP17.55■□□□□ 0.4
HDDC2-206ENST00000608461 CST9Q5W186 159 aa17.55■□□□□ 0.4
HDDC2-206ENST00000608461 SPTY2D1Q68D10 685 aaPredicted RBP17.55■□□□□ 0.4
HDDC2-206ENST00000608461 HHIPL2Q6UWX4 724 aa17.55■□□□□ 0.4
HDDC2-206ENST00000608461 TEKT1Q969V4 418 aa17.55■□□□□ 0.4
HDDC2-206ENST00000608461 KLRG1Q96E93 195 aa17.55■□□□□ 0.4
HDDC2-206ENST00000608461 HHIPL1Q96JK4 782 aa17.55■□□□□ 0.4
HDDC2-206ENST00000608461 EXOC6BQ9Y2D4 811 aa17.55■□□□□ 0.4
HDDC2-206ENST00000608461 CELF2O95319 508 aaKnown RBP17.54■□□□□ 0.4
HDDC2-206ENST00000608461 LDHBP07195 334 aaKnown RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms