RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 LIG3P49916 1009 aa7.57□□□□□ -1.2
LINC00397-202ENST00000606785 MAP3K11Q16584 847 aa7.57□□□□□ -1.2
LINC00397-202ENST00000606785 CEP120Q8N960 986 aa7.57□□□□□ -1.2
LINC00397-202ENST00000606785 NT5C1AQ9BXI3 368 aa7.57□□□□□ -1.2
LINC00397-202ENST00000606785 NDFIP2Q9NV92 336 aa7.57□□□□□ -1.2
LINC00397-202ENST00000606785 DZANK1Q9NVP4 752 aa7.57□□□□□ -1.2
LINC00397-202ENST00000606785 STRIP2Q9ULQ0 834 aa7.57□□□□□ -1.2
LINC00397-202ENST00000606785 CDK11AQ9UQ88 783 aaPredicted RBP7.57□□□□□ -1.2
LINC00397-202ENST00000606785 BNIP3LO60238 219 aa7.56□□□□□ -1.2
LINC00397-202ENST00000606785 ITGB2P05107 769 aa7.56□□□□□ -1.2
LINC00397-202ENST00000606785 CELA3AP09093 270 aa7.56□□□□□ -1.2
LINC00397-202ENST00000606785 GRIA4P48058 902 aa7.56□□□□□ -1.2
LINC00397-202ENST00000606785 SOX9P48436 509 aa7.56□□□□□ -1.2
LINC00397-202ENST00000606785 COL9A2Q14055 689 aaPredicted RBP7.56□□□□□ -1.2
LINC00397-202ENST00000606785 GRIN2CQ14957 1233 aa7.56□□□□□ -1.2
LINC00397-202ENST00000606785 FBXL19Q6PCT2 694 aa7.56□□□□□ -1.2
LINC00397-202ENST00000606785 DHX32Q7L7V1 743 aaKnown RBP7.56□□□□□ -1.2
LINC00397-202ENST00000606785 BHLHE41Q9C0J9 482 aaPredicted RBP7.56□□□□□ -1.2
LINC00397-202ENST00000606785 ZNF408Q9H9D4 720 aa7.56□□□□□ -1.2
LINC00397-202ENST00000606785 GINM1Q9NU53 330 aa7.56□□□□□ -1.2
LINC00397-202ENST00000606785 HCN2Q9UL51 889 aa7.56□□□□□ -1.2
LINC00397-202ENST00000606785 EFR3BQ9Y2G0 817 aa7.56□□□□□ -1.2
LINC00397-202ENST00000606785 TBX22Q9Y458 520 aa7.56□□□□□ -1.2
LINC00397-202ENST00000606785 SUPT16HQ9Y5B9 1047 aaKnown RBP7.56□□□□□ -1.2
LINC00397-202ENST00000606785 GREM1O60565 184 aa7.55□□□□□ -1.2
LINC00397-202ENST00000606785 PF4P02776 101 aa7.55□□□□□ -1.2
LINC00397-202ENST00000606785 GARTP22102 1010 aa7.55□□□□□ -1.2
LINC00397-202ENST00000606785 FAM160A1Q05DH4 1040 aa7.55□□□□□ -1.2
LINC00397-202ENST00000606785 BMS1Q14692 1282 aaKnown RBP7.55□□□□□ -1.2
LINC00397-202ENST00000606785 NFE2L2Q16236 605 aa7.55□□□□□ -1.2
LINC00397-202ENST00000606785 TMEM102Q8N9M5 508 aaPredicted RBP7.55□□□□□ -1.2
LINC00397-202ENST00000606785 GALNT6Q8NCL4 622 aa7.55□□□□□ -1.2
LINC00397-202ENST00000606785 BHMTQ93088 406 aa7.55□□□□□ -1.2
LINC00397-202ENST00000606785 SPACA7Q96KW9 195 aa7.55□□□□□ -1.2
LINC00397-202ENST00000606785 NSUN5Q96P11 429 aaKnown RBP7.55□□□□□ -1.2
LINC00397-202ENST00000606785 NECAB3Q96P71 396 aaPredicted RBP7.55□□□□□ -1.2
LINC00397-202ENST00000606785 SLC30A3Q99726 388 aa7.55□□□□□ -1.2
LINC00397-202ENST00000606785 TLR6Q9Y2C9 796 aa7.55□□□□□ -1.2
LINC00397-202ENST00000606785 ANKRD62A6NC57 917 aa7.54□□□□□ -1.2
LINC00397-202ENST00000606785 METTL12A8MUP2 240 aa7.54□□□□□ -1.2
LINC00397-202ENST00000606785 K7ELQ4 463 aaPredicted RBP7.54□□□□□ -1.2
LINC00397-202ENST00000606785 NFKBIEO00221 500 aa7.54□□□□□ -1.2
LINC00397-202ENST00000606785 PPM1GO15355 546 aaPredicted RBP7.54□□□□□ -1.2
LINC00397-202ENST00000606785 TRPA1O75762 1119 aa7.54□□□□□ -1.2
LINC00397-202ENST00000606785 NRLP54845 237 aa7.54□□□□□ -1.2
LINC00397-202ENST00000606785 LMNB2Q03252 620 aa7.54□□□□□ -1.2
LINC00397-202ENST00000606785 SPRED3Q2MJR0 410 aa7.54□□□□□ -1.2
LINC00397-202ENST00000606785 RPS26P11Q5JNZ5 115 aaPredicted RBP7.54□□□□□ -1.2
LINC00397-202ENST00000606785 SNAP47Q5SQN1 464 aa7.54□□□□□ -1.2
LINC00397-202ENST00000606785 SDE2Q6IQ49 451 aa7.54□□□□□ -1.2
LINC00397-202ENST00000606785 ZNF746Q6NUN9 644 aaPredicted RBP7.54□□□□□ -1.2
LINC00397-202ENST00000606785 TRIM22Q8IYM9 498 aa7.54□□□□□ -1.2
LINC00397-202ENST00000606785 A0A096LPE4 126 aa7.53□□□□□ -1.2
LINC00397-202ENST00000606785 A0A1W2PPZ6 126 aa7.53□□□□□ -1.2
LINC00397-202ENST00000606785 ENC1O14682 589 aa7.53□□□□□ -1.2
LINC00397-202ENST00000606785 RPS26P62854 115 aaKnown RBP7.53□□□□□ -1.2
LINC00397-202ENST00000606785 SERINC3Q13530 473 aa7.53□□□□□ -1.2
LINC00397-202ENST00000606785 CAMK2GQ13555 558 aaPredicted RBP7.53□□□□□ -1.2
LINC00397-202ENST00000606785 NEUROD1Q13562 356 aa7.53□□□□□ -1.2
LINC00397-202ENST00000606785 DBN1Q16643 649 aa7.53□□□□□ -1.2
LINC00397-202ENST00000606785 TTBK2Q6IQ55 1244 aa7.53□□□□□ -1.2
LINC00397-202ENST00000606785 AGMOQ6ZNB7 445 aa7.53□□□□□ -1.2
LINC00397-202ENST00000606785 PODNQ7Z5L7 613 aa7.53□□□□□ -1.2
LINC00397-202ENST00000606785 RAB44Q7Z6P3 723 aaPredicted RBP7.53□□□□□ -1.2
LINC00397-202ENST00000606785 BEND7Q8N7W2 519 aaPredicted RBP7.53□□□□□ -1.2
LINC00397-202ENST00000606785 GOLM1Q8NBJ4 401 aa7.53□□□□□ -1.2
LINC00397-202ENST00000606785 NXPE3Q969Y0 559 aa7.53□□□□□ -1.2
LINC00397-202ENST00000606785 ABHD17AQ96GS6 310 aa7.53□□□□□ -1.2
LINC00397-202ENST00000606785 PSMG3-AS1Q96PY0 264 aa7.53□□□□□ -1.2
LINC00397-202ENST00000606785 HHIPQ96QV1 700 aa7.53□□□□□ -1.2
LINC00397-202ENST00000606785 ZNF576Q9H609 170 aa7.53□□□□□ -1.2
LINC00397-202ENST00000606785 SEC31BQ9NQW1 1179 aa7.53□□□□□ -1.2
LINC00397-202ENST00000606785 UBP1Q9NZI7 540 aa7.53□□□□□ -1.2
LINC00397-202ENST00000606785 PDE2AO00408 941 aaPredicted RBP7.52□□□□□ -1.21
LINC00397-202ENST00000606785 CD33P20138 364 aa7.52□□□□□ -1.21
LINC00397-202ENST00000606785 GPLD1P80108 840 aa7.52□□□□□ -1.21
LINC00397-202ENST00000606785 APOBRQ0VD83 1088 aa7.52□□□□□ -1.21
LINC00397-202ENST00000606785 GAS6Q14393 721 aa7.52□□□□□ -1.21
LINC00397-202ENST00000606785 TRPM4Q8TD43 1214 aa7.52□□□□□ -1.21
LINC00397-202ENST00000606785 MKL1Q969V6 931 aa7.52□□□□□ -1.21
LINC00397-202ENST00000606785 MRFAP1L1Q96HT8 127 aa7.52□□□□□ -1.21
LINC00397-202ENST00000606785 GMCL1Q96IK5 515 aa7.52□□□□□ -1.21
LINC00397-202ENST00000606785 ATXN7L1Q9ULK2 861 aaPredicted RBP7.52□□□□□ -1.21
LINC00397-202ENST00000606785 MRVI1Q9Y6F6 885 aa7.52□□□□□ -1.21
LINC00397-202ENST00000606785 CNTNAP5Q8WYK1 1306 aa7.52□□□□□ -1.21
LINC00397-202ENST00000606785 LOC102724428A0A0B4J2F2 783 aa7.51□□□□□ -1.21
LINC00397-202ENST00000606785 TFE3P19532 575 aaPredicted RBP7.51□□□□□ -1.21
LINC00397-202ENST00000606785 ETFBP38117 255 aa7.51□□□□□ -1.21
LINC00397-202ENST00000606785 SIK1P57059 783 aa7.51□□□□□ -1.21
LINC00397-202ENST00000606785 FAAP100Q0VG06 881 aa7.51□□□□□ -1.21
LINC00397-202ENST00000606785 FAM182BQ5T319 152 aa7.51□□□□□ -1.21
LINC00397-202ENST00000606785 PCNX4Q63HM2 1172 aa7.51□□□□□ -1.21
LINC00397-202ENST00000606785 ZNF662Q6ZS27 426 aa7.51□□□□□ -1.21
LINC00397-202ENST00000606785 FAM196AQ6ZSG2 479 aa7.51□□□□□ -1.21
LINC00397-202ENST00000606785 ANKS3Q6ZW76 656 aa7.51□□□□□ -1.21
LINC00397-202ENST00000606785 NLGN1Q8N2Q7 840 aa7.51□□□□□ -1.21
LINC00397-202ENST00000606785 Q8N3U1 123 aa7.51□□□□□ -1.21
LINC00397-202ENST00000606785 PBX4Q9BYU1 374 aa7.51□□□□□ -1.21
LINC00397-202ENST00000606785 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.5□□□□□ -1.21
LINC00397-202ENST00000606785 CRKP46108 304 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms