RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 TBC1D22AQ8WUA7 517 aa14.35□□□□□ -0.11
CCDC12-209ENST00000604164 SIL1Q9H173 461 aa14.35□□□□□ -0.11
CCDC12-209ENST00000604164 MKRN1Q9UHC7 482 aaKnown RBP14.35□□□□□ -0.11
CCDC12-209ENST00000604164 CEP350Q5VT06 3117 aa14.34□□□□□ -0.11
CCDC12-209ENST00000604164 MYO1BO43795 1136 aa14.34□□□□□ -0.11
CCDC12-209ENST00000604164 CST9Q5W186 159 aa14.34□□□□□ -0.11
CCDC12-209ENST00000604164 ATG9AQ7Z3C6 839 aa14.34□□□□□ -0.11
CCDC12-209ENST00000604164 MXD3Q9BW11 206 aa14.34□□□□□ -0.11
CCDC12-209ENST00000604164 CHMP4BQ9H444 224 aaKnown RBP14.34□□□□□ -0.11
CCDC12-209ENST00000604164 GNL3LQ9NVN8 582 aaKnown RBP14.34□□□□□ -0.11
CCDC12-209ENST00000604164 AKAP2Q9Y2D5 859 aa14.34□□□□□ -0.11
CCDC12-209ENST00000604164 TLL2Q9Y6L7 1015 aa14.34□□□□□ -0.11
CCDC12-209ENST00000604164 FGFR2P21802 821 aa14.33□□□□□ -0.12
CCDC12-209ENST00000604164 DLGAP5Q15398 846 aa14.33□□□□□ -0.12
CCDC12-209ENST00000604164 ATP2B3Q16720 1220 aa14.33□□□□□ -0.12
CCDC12-209ENST00000604164 MFSD14BQ5SR56 506 aa14.33□□□□□ -0.12
CCDC12-209ENST00000604164 ANGEL2Q5VTE6 544 aaKnown RBP14.33□□□□□ -0.12
CCDC12-209ENST00000604164 APOBEC3FQ8IUX4 373 aaKnown RBP14.33□□□□□ -0.12
CCDC12-209ENST00000604164 C2orf69Q8N8R5 385 aa14.33□□□□□ -0.12
CCDC12-209ENST00000604164 HHIPL1Q96JK4 782 aa14.33□□□□□ -0.12
CCDC12-209ENST00000604164 ZNF408Q9H9D4 720 aa14.33□□□□□ -0.12
CCDC12-209ENST00000604164 RCAN3Q9UKA8 241 aa14.33□□□□□ -0.12
CCDC12-209ENST00000604164 TRPM7Q96QT4 1865 aa14.32□□□□□ -0.12
CCDC12-209ENST00000604164 WNT10BO00744 389 aa14.32□□□□□ -0.12
CCDC12-209ENST00000604164 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.32□□□□□ -0.12
CCDC12-209ENST00000604164 MTMR14Q8NCE2 650 aa14.32□□□□□ -0.12
CCDC12-209ENST00000604164 TNNQ9UQP3 1299 aa14.32□□□□□ -0.12
CCDC12-209ENST00000604164 SUGT1Q9Y2Z0 365 aa14.32□□□□□ -0.12
CCDC12-209ENST00000604164 NF2P35240 595 aa14.31□□□□□ -0.12
CCDC12-209ENST00000604164 BCAMP50895 628 aa14.31□□□□□ -0.12
CCDC12-209ENST00000604164 G3BP1Q13283 466 aaKnown RBP eCLIP14.31□□□□□ -0.12
CCDC12-209ENST00000604164 PAXIP1Q6ZW49 1069 aaPredicted RBP14.31□□□□□ -0.12
CCDC12-209ENST00000604164 SAPCD2Q86UD0 394 aa14.31□□□□□ -0.12
CCDC12-209ENST00000604164 CERS5Q8N5B7 392 aa14.31□□□□□ -0.12
CCDC12-209ENST00000604164 PA2G4Q9UQ80 394 aaKnown RBP14.31□□□□□ -0.12
CCDC12-209ENST00000604164 MAST3O60307 1309 aa14.31□□□□□ -0.12
CCDC12-209ENST00000604164 ADM5C9JUS6 153 aa14.3□□□□□ -0.12
CCDC12-209ENST00000604164 F8W031 263 aaPredicted RBP14.3□□□□□ -0.12
CCDC12-209ENST00000604164 SEMA3EO15041 775 aa14.3□□□□□ -0.12
CCDC12-209ENST00000604164 ZBTB7BO15156 539 aaPredicted RBP14.3□□□□□ -0.12
CCDC12-209ENST00000604164 VEGFBP49765 207 aa14.3□□□□□ -0.12
CCDC12-209ENST00000604164 RBM5P52756 815 aaKnown RBP eCLIP14.3□□□□□ -0.12
CCDC12-209ENST00000604164 FKBP1BP68106 108 aa14.3□□□□□ -0.12
CCDC12-209ENST00000604164 FMR1Q06787 632 aaKnown RBP eCLIP14.3□□□□□ -0.12
CCDC12-209ENST00000604164 NBPF9Q3BBW0 867 aa14.3□□□□□ -0.12
CCDC12-209ENST00000604164 WDR66Q8TBY9 1149 aa14.3□□□□□ -0.12
CCDC12-209ENST00000604164 GBA2Q9HCG7 927 aaPredicted RBP14.3□□□□□ -0.12
CCDC12-209ENST00000604164 SERPINA10Q9UK55 444 aa14.3□□□□□ -0.12
CCDC12-209ENST00000604164 ZBTB22O15209 634 aa14.29□□□□□ -0.12
CCDC12-209ENST00000604164 RLBP1P12271 317 aa14.29□□□□□ -0.12
CCDC12-209ENST00000604164 ATP8B2P98198 1209 aa14.29□□□□□ -0.12
CCDC12-209ENST00000604164 HDLBPQ00341 1268 aaKnown RBP14.29□□□□□ -0.12
CCDC12-209ENST00000604164 CHAF1AQ13111 956 aaPredicted RBP14.29□□□□□ -0.12
CCDC12-209ENST00000604164 CFAP100Q494V2 611 aa14.29□□□□□ -0.12
CCDC12-209ENST00000604164 CDCA5Q96FF9 252 aa14.29□□□□□ -0.12
CCDC12-209ENST00000604164 ZBED3Q96IU2 234 aaPredicted RBP14.29□□□□□ -0.12
CCDC12-209ENST00000604164 TTF2Q9UNY4 1162 aaKnown RBP14.29□□□□□ -0.12
CCDC12-209ENST00000604164 JAG2Q9Y219 1238 aa14.29□□□□□ -0.12
CCDC12-209ENST00000604164 PPP2R3BQ9Y5P8 575 aa14.29□□□□□ -0.12
CCDC12-209ENST00000604164 WDR33Q9C0J8 1336 aaKnown RBP14.29□□□□□ -0.12
CCDC12-209ENST00000604164 ZNF646O15015 1829 aaPredicted RBP14.29□□□□□ -0.12
CCDC12-209ENST00000604164 SPDYE2BA6NHP3 402 aa14.28□□□□□ -0.12
CCDC12-209ENST00000604164 ASTN2O75129 1339 aaPredicted RBP14.28□□□□□ -0.12
CCDC12-209ENST00000604164 COL1A1P02452 1464 aaPredicted RBP14.28□□□□□ -0.12
CCDC12-209ENST00000604164 SPDYE6P0CI01 402 aa14.28□□□□□ -0.12
CCDC12-209ENST00000604164 MAP2K1Q02750 393 aaPredicted RBP14.28□□□□□ -0.12
CCDC12-209ENST00000604164 TNFAIP1Q13829 316 aa14.28□□□□□ -0.12
CCDC12-209ENST00000604164 MVPQ14764 893 aaKnown RBP14.28□□□□□ -0.12
CCDC12-209ENST00000604164 AIDAQ96BJ3 306 aa14.28□□□□□ -0.12
CCDC12-209ENST00000604164 CAPNS2Q96L46 248 aa14.28□□□□□ -0.12
CCDC12-209ENST00000604164 MRIQ9BWK5 157 aa14.28□□□□□ -0.12
CCDC12-209ENST00000604164 DENND2AQ9ULE3 1009 aa14.28□□□□□ -0.12
CCDC12-209ENST00000604164 DDX19BQ9UMR2 479 aa14.28□□□□□ -0.12
CCDC12-209ENST00000604164 IQSEC3Q9UPP2 1182 aaPredicted RBP14.28□□□□□ -0.12
CCDC12-209ENST00000604164 PNMA6EA0A0J9YXQ4 647 aa14.27□□□□□ -0.13
CCDC12-209ENST00000604164 MAP2K2P36507 400 aa14.27□□□□□ -0.13
CCDC12-209ENST00000604164 HUNKP57058 714 aa14.27□□□□□ -0.13
CCDC12-209ENST00000604164 OS9Q13438 667 aaPredicted RBP14.27□□□□□ -0.13
CCDC12-209ENST00000604164 POLA2Q14181 598 aa14.27□□□□□ -0.13
CCDC12-209ENST00000604164 ZGPATQ8N5A5 531 aaKnown RBP14.27□□□□□ -0.13
CCDC12-209ENST00000604164 SSH3Q8TE77 659 aa14.27□□□□□ -0.13
CCDC12-209ENST00000604164 TEKT1Q969V4 418 aa14.27□□□□□ -0.13
CCDC12-209ENST00000604164 TFCP2Q12800 502 aa14.26□□□□□ -0.13
CCDC12-209ENST00000604164 GORABQ5T7V8 394 aa14.26□□□□□ -0.13
CCDC12-209ENST00000604164 PANK1Q8TE04 598 aa14.26□□□□□ -0.13
CCDC12-209ENST00000604164 CCDC102AQ96A19 550 aa14.26□□□□□ -0.13
CCDC12-209ENST00000604164 BEGAINQ9BUH8 593 aa14.26□□□□□ -0.13
CCDC12-209ENST00000604164 PDS5AQ29RF7 1337 aaKnown RBP14.25□□□□□ -0.13
CCDC12-209ENST00000604164 A0A1B0GUL7 405 aa14.25□□□□□ -0.13
CCDC12-209ENST00000604164 HSPA1AP0DMV8 641 aaKnown RBP14.25□□□□□ -0.13
CCDC12-209ENST00000604164 HSPA1BP0DMV9 641 aaKnown RBP14.25□□□□□ -0.13
CCDC12-209ENST00000604164 CRKP46108 304 aa14.25□□□□□ -0.13
CCDC12-209ENST00000604164 NOGQ13253 232 aa14.25□□□□□ -0.13
CCDC12-209ENST00000604164 GRM1Q13255 1194 aa14.25□□□□□ -0.13
CCDC12-209ENST00000604164 PDE3AQ14432 1141 aa14.25□□□□□ -0.13
CCDC12-209ENST00000604164 HSP90AB4PQ58FF6 505 aa14.25□□□□□ -0.13
CCDC12-209ENST00000604164 CCDC102BQ68D86 513 aa14.25□□□□□ -0.13
CCDC12-209ENST00000604164 CYP4F22Q6NT55 531 aa14.25□□□□□ -0.13
CCDC12-209ENST00000604164 RGMBQ6NW40 437 aa14.25□□□□□ -0.13
CCDC12-209ENST00000604164 TMOD2Q9NZR1 351 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms