RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 A0A1B0GUL7 405 aa24.83■■□□□ 1.57
SSBP4-210ENST00000601444 USP17L8P0C7I0 530 aa24.83■■□□□ 1.57
SSBP4-210ENST00000601444 OS9Q13438 667 aaPredicted RBP24.83■■□□□ 1.57
SSBP4-210ENST00000601444 MAP1SQ66K74 1059 aaPredicted RBP24.83■■□□□ 1.57
SSBP4-210ENST00000601444 EXOC6BQ9Y2D4 811 aa24.83■■□□□ 1.57
SSBP4-210ENST00000601444 ZNF280AP59817 542 aaPredicted RBP24.82■■□□□ 1.56
SSBP4-210ENST00000601444 KIAA0825Q8IV33 1275 aa24.82■■□□□ 1.56
SSBP4-210ENST00000601444 SUPT16HQ9Y5B9 1047 aaKnown RBP24.82■■□□□ 1.56
SSBP4-210ENST00000601444 FAM205AQ6ZU69 1335 aa24.82■■□□□ 1.56
SSBP4-210ENST00000601444 CHAF1AQ13111 956 aaPredicted RBP24.81■■□□□ 1.56
SSBP4-210ENST00000601444 NEUROD6Q96NK8 337 aa24.81■■□□□ 1.56
SSBP4-210ENST00000601444 AKAP2Q9Y2D5 859 aa24.81■■□□□ 1.56
SSBP4-210ENST00000601444 MYO3BQ8WXR4 1341 aa24.81■■□□□ 1.56
SSBP4-210ENST00000601444 FRAT2O75474 233 aaPredicted RBP24.8■■□□□ 1.56
SSBP4-210ENST00000601444 PHKA1P46020 1223 aa24.8■■□□□ 1.56
SSBP4-210ENST00000601444 XAGE2Q96GT9 111 aa24.8■■□□□ 1.56
SSBP4-210ENST00000601444 F8W031 263 aaPredicted RBP24.79■■□□□ 1.56
SSBP4-210ENST00000601444 KIF4BQ2VIQ3 1234 aa24.79■■□□□ 1.56
SSBP4-210ENST00000601444 CNTROBQ8N137 903 aa24.79■■□□□ 1.56
SSBP4-210ENST00000601444 MYOZ2Q9NPC6 264 aa24.79■■□□□ 1.56
SSBP4-210ENST00000601444 ITGBL1O95965 494 aaPredicted RBP24.78■■□□□ 1.56
SSBP4-210ENST00000601444 GRIK5Q16478 980 aa24.78■■□□□ 1.56
SSBP4-210ENST00000601444 MFSD14BQ5SR56 506 aa24.78■■□□□ 1.56
SSBP4-210ENST00000601444 CCDC102BQ68D86 513 aa24.78■■□□□ 1.56
SSBP4-210ENST00000601444 ASTN2O75129 1339 aaPredicted RBP24.78■■□□□ 1.56
SSBP4-210ENST00000601444 HMMRO75330 724 aa24.77■■□□□ 1.56
SSBP4-210ENST00000601444 FKBP1AP62942 108 aaKnown RBP24.77■■□□□ 1.56
SSBP4-210ENST00000601444 TNNI3KQ59H18 835 aa24.77■■□□□ 1.56
SSBP4-210ENST00000601444 PGAP2Q9UHJ9 254 aa24.77■■□□□ 1.56
SSBP4-210ENST00000601444 FPGT-TNNI3KV9GXZ4 949 aa24.77■■□□□ 1.56
SSBP4-210ENST00000601444 FMR1Q06787 632 aaKnown RBP eCLIP24.76■■□□□ 1.55
SSBP4-210ENST00000601444 OGFOD1Q8N543 542 aa24.76■■□□□ 1.55
SSBP4-210ENST00000601444 PCDHB15Q9Y5E8 787 aa24.76■■□□□ 1.55
SSBP4-210ENST00000601444 COL1A1P02452 1464 aaPredicted RBP24.76■■□□□ 1.55
SSBP4-210ENST00000601444 APBB1O00213 710 aa24.75■■□□□ 1.55
SSBP4-210ENST00000601444 HSPA6P17066 643 aa24.75■■□□□ 1.55
SSBP4-210ENST00000601444 SCARF1Q14162 830 aa24.75■■□□□ 1.55
SSBP4-210ENST00000601444 GPR108Q9NPR9 543 aa24.75■■□□□ 1.55
SSBP4-210ENST00000601444 PCDHAC2Q9Y5I4 1007 aa24.75■■□□□ 1.55
SSBP4-210ENST00000601444 ARAP2Q8WZ64 1704 aa24.75■■□□□ 1.55
SSBP4-210ENST00000601444 NBPF9Q3BBW0 867 aa24.74■■□□□ 1.55
SSBP4-210ENST00000601444 ZC3H15Q8WU90 426 aaKnown RBP24.74■■□□□ 1.55
SSBP4-210ENST00000601444 GNL3LQ9NVN8 582 aaKnown RBP24.74■■□□□ 1.55
SSBP4-210ENST00000601444 PASKQ96RG2 1323 aa24.73■■□□□ 1.55
SSBP4-210ENST00000601444 DLK2Q6UY11 383 aa24.73■■□□□ 1.55
SSBP4-210ENST00000601444 RHPN1Q8TCX5 695 aa24.73■■□□□ 1.55
SSBP4-210ENST00000601444 EAF2Q96CJ1 260 aaPredicted RBP24.73■■□□□ 1.55
SSBP4-210ENST00000601444 DBNDD2Q9BQY9 259 aa24.73■■□□□ 1.55
SSBP4-210ENST00000601444 GLIS2Q9BZE0 524 aaPredicted RBP24.73■■□□□ 1.55
SSBP4-210ENST00000601444 CCDC8Q9H0W5 538 aaPredicted RBP24.73■■□□□ 1.55
SSBP4-210ENST00000601444 HDAC9Q9UKV0 1011 aa24.73■■□□□ 1.55
SSBP4-210ENST00000601444 TRAF5O00463 557 aa24.72■■□□□ 1.55
SSBP4-210ENST00000601444 HTRA3P83110 453 aa24.72■■□□□ 1.55
SSBP4-210ENST00000601444 GORABQ5T7V8 394 aa24.72■■□□□ 1.55
SSBP4-210ENST00000601444 IL1RAPL2Q9NP60 686 aa24.72■■□□□ 1.55
SSBP4-210ENST00000601444 TLR7Q9NYK1 1049 aaKnown RBP24.72■■□□□ 1.55
SSBP4-210ENST00000601444 WNT10BO00744 389 aa24.71■■□□□ 1.55
SSBP4-210ENST00000601444 RASGRF1Q13972 1273 aa24.71■■□□□ 1.55
SSBP4-210ENST00000601444 HSP90AB4PQ58FF6 505 aa24.71■■□□□ 1.55
SSBP4-210ENST00000601444 ERC1Q8IUD2 1116 aa24.71■■□□□ 1.55
SSBP4-210ENST00000601444 GGA3Q9NZ52 723 aa24.71■■□□□ 1.55
SSBP4-210ENST00000601444 TTF2Q9UNY4 1162 aaKnown RBP24.71■■□□□ 1.55
SSBP4-210ENST00000601444 SCAF8Q9UPN6 1271 aaKnown RBP24.71■■□□□ 1.55
SSBP4-210ENST00000601444 ANGEL2Q5VTE6 544 aaKnown RBP24.7■■□□□ 1.54
SSBP4-210ENST00000601444 USP48Q86UV5 1035 aa24.7■■□□□ 1.54
SSBP4-210ENST00000601444 TBC1D22AQ8WUA7 517 aa24.7■■□□□ 1.54
SSBP4-210ENST00000601444 ZBED3Q96IU2 234 aaPredicted RBP24.7■■□□□ 1.54
SSBP4-210ENST00000601444 BCL11AQ9H165 835 aa24.7■■□□□ 1.54
SSBP4-210ENST00000601444 DBNLQ9UJU6 430 aaKnown RBP24.7■■□□□ 1.54
SSBP4-210ENST00000601444 DENND2AQ9ULE3 1009 aa24.7■■□□□ 1.54
SSBP4-210ENST00000601444 APLP1P51693 650 aa24.69■■□□□ 1.54
SSBP4-210ENST00000601444 CFAP100Q494V2 611 aa24.69■■□□□ 1.54
SSBP4-210ENST00000601444 PI16Q6UXB8 463 aa24.69■■□□□ 1.54
SSBP4-210ENST00000601444 EXOC6Q8TAG9 804 aa24.69■■□□□ 1.54
SSBP4-210ENST00000601444 WDR66Q8TBY9 1149 aa24.69■■□□□ 1.54
SSBP4-210ENST00000601444 AOX1Q06278 1338 aa24.68■■□□□ 1.54
SSBP4-210ENST00000601444 SEMA3EO15041 775 aa24.68■■□□□ 1.54
SSBP4-210ENST00000601444 MMP14P50281 582 aa24.68■■□□□ 1.54
SSBP4-210ENST00000601444 DCPSQ96C86 337 aaKnown RBP24.68■■□□□ 1.54
SSBP4-210ENST00000601444 KIF1BPQ96EK5 621 aa24.68■■□□□ 1.54
SSBP4-210ENST00000601444 ADM5C9JUS6 153 aa24.67■■□□□ 1.54
SSBP4-210ENST00000601444 RAB11FIP3O75154 756 aa24.67■■□□□ 1.54
SSBP4-210ENST00000601444 ARID4AP29374 1257 aaPredicted RBP24.67■■□□□ 1.54
SSBP4-210ENST00000601444 RBM5P52756 815 aaKnown RBP eCLIP24.67■■□□□ 1.54
SSBP4-210ENST00000601444 IRX6P78412 446 aaPredicted RBP24.67■■□□□ 1.54
SSBP4-210ENST00000601444 DLGAP5Q15398 846 aa24.67■■□□□ 1.54
SSBP4-210ENST00000601444 CDC37L1Q7L3B6 337 aa24.67■■□□□ 1.54
SSBP4-210ENST00000601444 AACSQ86V21 672 aa24.67■■□□□ 1.54
SSBP4-210ENST00000601444 PRMT6Q96LA8 375 aaPredicted RBP24.67■■□□□ 1.54
SSBP4-210ENST00000601444 HMG20BQ9P0W2 317 aa24.67■■□□□ 1.54
SSBP4-210ENST00000601444 ZBTB22O15209 634 aa24.66■■□□□ 1.54
SSBP4-210ENST00000601444 PRDX5P30044 214 aa24.66■■□□□ 1.54
SSBP4-210ENST00000601444 MCAMP43121 646 aa24.66■■□□□ 1.54
SSBP4-210ENST00000601444 KRT26Q7Z3Y9 468 aa24.66■■□□□ 1.54
SSBP4-210ENST00000601444 MTMR14Q8NCE2 650 aa24.66■■□□□ 1.54
SSBP4-210ENST00000601444 CRKP46108 304 aa24.65■■□□□ 1.54
SSBP4-210ENST00000601444 CCDC158Q5M9N0 1113 aa24.65■■□□□ 1.54
SSBP4-210ENST00000601444 TTC39AQ5SRH9 613 aa24.65■■□□□ 1.54
SSBP4-210ENST00000601444 SPATA5Q8NB90 893 aa24.65■■□□□ 1.54
SSBP4-210ENST00000601444 DCTPP1Q9H773 170 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms