RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 PNMA8AQ86V59 439 aaPredicted RBP24.24■■□□□ 1.47
SHKBP1-214ENST00000597396 MXD3Q9BW11 206 aa24.24■■□□□ 1.47
SHKBP1-214ENST00000597396 ADARB2Q9NS39 739 aaKnown RBP24.24■■□□□ 1.47
SHKBP1-214ENST00000597396 GNL3LQ9NVN8 582 aaKnown RBP24.24■■□□□ 1.47
SHKBP1-214ENST00000597396 JAG2Q9Y219 1238 aa24.24■■□□□ 1.47
SHKBP1-214ENST00000597396 XAGE2Q96GT9 111 aa24.23■■□□□ 1.47
SHKBP1-214ENST00000597396 GPR108Q9NPR9 543 aa24.23■■□□□ 1.47
SHKBP1-214ENST00000597396 FAM205AQ6ZU69 1335 aa24.22■■□□□ 1.47
SHKBP1-214ENST00000597396 SHTN1A0MZ66 631 aa24.22■■□□□ 1.47
SHKBP1-214ENST00000597396 APBB1O00213 710 aa24.22■■□□□ 1.47
SHKBP1-214ENST00000597396 CHAF1AQ13111 956 aaPredicted RBP24.22■■□□□ 1.47
SHKBP1-214ENST00000597396 TNNI3KQ59H18 835 aa24.22■■□□□ 1.47
SHKBP1-214ENST00000597396 GORABQ5T7V8 394 aa24.22■■□□□ 1.47
SHKBP1-214ENST00000597396 CLEC11AQ9Y240 323 aa24.22■■□□□ 1.47
SHKBP1-214ENST00000597396 FPGT-TNNI3KV9GXZ4 949 aa24.22■■□□□ 1.47
SHKBP1-214ENST00000597396 PHKA1P46020 1223 aa24.21■■□□□ 1.47
SHKBP1-214ENST00000597396 AAMPQ13685 434 aa24.21■■□□□ 1.47
SHKBP1-214ENST00000597396 USP50Q70EL3 339 aaPredicted RBP24.21■■□□□ 1.47
SHKBP1-214ENST00000597396 GMLQ99445 158 aa24.21■■□□□ 1.47
SHKBP1-214ENST00000597396 PCDHB15Q9Y5E8 787 aa24.21■■□□□ 1.47
SHKBP1-214ENST00000597396 ADAMTSL1Q8N6G6 1762 aa24.21■■□□□ 1.47
SHKBP1-214ENST00000597396 RAB11FIP3O75154 756 aa24.2■■□□□ 1.46
SHKBP1-214ENST00000597396 USP17L8P0C7I0 530 aa24.2■■□□□ 1.46
SHKBP1-214ENST00000597396 CCDC102BQ68D86 513 aa24.2■■□□□ 1.46
SHKBP1-214ENST00000597396 LDHDQ86WU2 507 aa24.2■■□□□ 1.46
SHKBP1-214ENST00000597396 JMYQ8N9B5 988 aa24.2■■□□□ 1.46
SHKBP1-214ENST00000597396 EXOC6Q8TAG9 804 aa24.2■■□□□ 1.46
SHKBP1-214ENST00000597396 KIF1BPQ96EK5 621 aa24.2■■□□□ 1.46
SHKBP1-214ENST00000597396 POTEIP0CG38 1075 aa24.19■■□□□ 1.46
SHKBP1-214ENST00000597396 POTEJP0CG39 1038 aa24.19■■□□□ 1.46
SHKBP1-214ENST00000597396 FKBP1AP62942 108 aaKnown RBP24.19■■□□□ 1.46
SHKBP1-214ENST00000597396 MFSD14BQ5SR56 506 aa24.19■■□□□ 1.46
SHKBP1-214ENST00000597396 KIAA0825Q8IV33 1275 aa24.19■■□□□ 1.46
SHKBP1-214ENST00000597396 OGFOD1Q8N543 542 aa24.19■■□□□ 1.46
SHKBP1-214ENST00000597396 RHPN1Q8TCX5 695 aa24.19■■□□□ 1.46
SHKBP1-214ENST00000597396 POLR2AP24928 1970 aaKnown RBP24.19■■□□□ 1.46
SHKBP1-214ENST00000597396 IRX6P78412 446 aaPredicted RBP24.18■■□□□ 1.46
SHKBP1-214ENST00000597396 TBC1D10BQ4KMP7 808 aaPredicted RBP24.18■■□□□ 1.46
SHKBP1-214ENST00000597396 RBM26Q5T8P6 1007 aaKnown RBP24.18■■□□□ 1.46
SHKBP1-214ENST00000597396 SAMD7Q7Z3H4 446 aa24.18■■□□□ 1.46
SHKBP1-214ENST00000597396 CERS5Q8N5B7 392 aa24.18■■□□□ 1.46
SHKBP1-214ENST00000597396 TRPM4Q8TD43 1214 aa24.18■■□□□ 1.46
SHKBP1-214ENST00000597396 HDAC9Q9UKV0 1011 aa24.18■■□□□ 1.46
SHKBP1-214ENST00000597396 ZNF280AP59817 542 aaPredicted RBP24.17■■□□□ 1.46
SHKBP1-214ENST00000597396 CHADLQ6NUI6 762 aa24.17■■□□□ 1.46
SHKBP1-214ENST00000597396 TBC1D22AQ8WUA7 517 aa24.17■■□□□ 1.46
SHKBP1-214ENST00000597396 IL1RAPL2Q9NP60 686 aa24.17■■□□□ 1.46
SHKBP1-214ENST00000597396 DENND2AQ9ULE3 1009 aa24.17■■□□□ 1.46
SHKBP1-214ENST00000597396 F8W031 263 aaPredicted RBP24.16■■□□□ 1.46
SHKBP1-214ENST00000597396 SEMA3EO15041 775 aa24.16■■□□□ 1.46
SHKBP1-214ENST00000597396 KIF4BQ2VIQ3 1234 aa24.16■■□□□ 1.46
SHKBP1-214ENST00000597396 DBNDD2Q9BQY9 259 aa24.16■■□□□ 1.46
SHKBP1-214ENST00000597396 CCDC8Q9H0W5 538 aaPredicted RBP24.16■■□□□ 1.46
SHKBP1-214ENST00000597396 BCL11AQ9H165 835 aa24.16■■□□□ 1.46
SHKBP1-214ENST00000597396 COL1A1P02452 1464 aaPredicted RBP24.15■■□□□ 1.46
SHKBP1-214ENST00000597396 MMP14P50281 582 aa24.15■■□□□ 1.46
SHKBP1-214ENST00000597396 AACSQ86V21 672 aa24.15■■□□□ 1.46
SHKBP1-214ENST00000597396 CLASRPQ8N2M8 674 aaKnown RBP24.15■■□□□ 1.46
SHKBP1-214ENST00000597396 WDR66Q8TBY9 1149 aa24.15■■□□□ 1.46
SHKBP1-214ENST00000597396 EAF2Q96CJ1 260 aaPredicted RBP24.15■■□□□ 1.46
SHKBP1-214ENST00000597396 MYOZ2Q9NPC6 264 aa24.15■■□□□ 1.46
SHKBP1-214ENST00000597396 ECM29Q5VYK3 1845 aa24.14■■□□□ 1.46
SHKBP1-214ENST00000597396 CCDC158Q5M9N0 1113 aa24.14■■□□□ 1.45
SHKBP1-214ENST00000597396 TTC39AQ5SRH9 613 aa24.14■■□□□ 1.45
SHKBP1-214ENST00000597396 DCTPP1Q9H773 170 aa24.14■■□□□ 1.45
SHKBP1-214ENST00000597396 EGFRP00533 1210 aa24.13■■□□□ 1.45
SHKBP1-214ENST00000597396 UQCRFS1P1P0C7P4 283 aa24.13■■□□□ 1.45
SHKBP1-214ENST00000597396 HIRAP54198 1017 aaPredicted RBP24.13■■□□□ 1.45
SHKBP1-214ENST00000597396 LRRCC1Q9C099 1032 aa24.13■■□□□ 1.45
SHKBP1-214ENST00000597396 DBNLQ9UJU6 430 aaKnown RBP24.13■■□□□ 1.45
SHKBP1-214ENST00000597396 AKAP11Q9UKA4 1901 aa24.13■■□□□ 1.45
SHKBP1-214ENST00000597396 RASGRF1Q13972 1273 aa24.12■■□□□ 1.45
SHKBP1-214ENST00000597396 TLR7Q9NYK1 1049 aaKnown RBP24.12■■□□□ 1.45
SHKBP1-214ENST00000597396 TTF2Q9UNY4 1162 aaKnown RBP24.12■■□□□ 1.45
SHKBP1-214ENST00000597396 ZBTB22O15209 634 aa24.11■■□□□ 1.45
SHKBP1-214ENST00000597396 ARID4AP29374 1257 aaPredicted RBP24.11■■□□□ 1.45
SHKBP1-214ENST00000597396 ZC3H15Q8WU90 426 aaKnown RBP24.11■■□□□ 1.45
SHKBP1-214ENST00000597396 IFIT2P09913 472 aaKnown RBP24.1■■□□□ 1.45
SHKBP1-214ENST00000597396 MAP1SQ66K74 1059 aaPredicted RBP24.1■■□□□ 1.45
SHKBP1-214ENST00000597396 PDS5AQ29RF7 1337 aaKnown RBP24.1■■□□□ 1.45
SHKBP1-214ENST00000597396 CENPBP07199 599 aaPredicted RBP24.09■■□□□ 1.45
SHKBP1-214ENST00000597396 DLGAP5Q15398 846 aa24.09■■□□□ 1.45
SHKBP1-214ENST00000597396 ZGPATQ8N5A5 531 aaKnown RBP24.09■■□□□ 1.45
SHKBP1-214ENST00000597396 SUGT1Q9Y2Z0 365 aa24.09■■□□□ 1.45
SHKBP1-214ENST00000597396 MYH2Q9UKX2 1941 aa24.09■■□□□ 1.45
SHKBP1-214ENST00000597396 TRPM7Q96QT4 1865 aa24.09■■□□□ 1.45
SHKBP1-214ENST00000597396 MAST3O60307 1309 aa24.09■■□□□ 1.45
SHKBP1-214ENST00000597396 SMARCA5O60264 1052 aaPredicted RBP24.08■■□□□ 1.45
SHKBP1-214ENST00000597396 RBM5P52756 815 aaKnown RBP eCLIP24.08■■□□□ 1.45
SHKBP1-214ENST00000597396 HDAC1Q13547 482 aaPredicted RBP24.08■■□□□ 1.45
SHKBP1-214ENST00000597396 SCARF1Q14162 830 aa24.08■■□□□ 1.45
SHKBP1-214ENST00000597396 GRIK5Q16478 980 aa24.08■■□□□ 1.45
SHKBP1-214ENST00000597396 CNTROBQ8N137 903 aa24.08■■□□□ 1.45
SHKBP1-214ENST00000597396 SPATA5Q8NB90 893 aa24.08■■□□□ 1.45
SHKBP1-214ENST00000597396 HMG20BQ9P0W2 317 aa24.08■■□□□ 1.45
SHKBP1-214ENST00000597396 MYO5AQ9Y4I1 1855 aaKnown RBP24.08■■□□□ 1.45
SHKBP1-214ENST00000597396 SALL1Q9NSC2 1324 aa24.08■■□□□ 1.44
SHKBP1-214ENST00000597396 MCAMP43121 646 aa24.07■■□□□ 1.44
SHKBP1-214ENST00000597396 CFAP100Q494V2 611 aa24.07■■□□□ 1.44
SHKBP1-214ENST00000597396 DCPSQ96C86 337 aaKnown RBP24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms