RNA–Protein interactions for RNA: ENST00000592643.5

H3F3B-212, Transcript of H3 histone family member 3B, humanhuman

TSL 3 BASIC

Gene H3F3B, Length 795 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-212ENST00000592643 PHKA1P46020 1223 aa14.7□□□□□ -0.06
H3F3B-212ENST00000592643 FMR1Q06787 632 aaKnown RBP eCLIP14.7□□□□□ -0.06
H3F3B-212ENST00000592643 FSTL1Q12841 308 aa14.7□□□□□ -0.06
H3F3B-212ENST00000592643 TBC1D10BQ4KMP7 808 aaPredicted RBP14.7□□□□□ -0.06
H3F3B-212ENST00000592643 MAP1SQ66K74 1059 aaPredicted RBP14.7□□□□□ -0.06
H3F3B-212ENST00000592643 CHADLQ6NUI6 762 aa14.7□□□□□ -0.06
H3F3B-212ENST00000592643 DLK2Q6UY11 383 aa14.7□□□□□ -0.06
H3F3B-212ENST00000592643 USP50Q70EL3 339 aaPredicted RBP14.7□□□□□ -0.06
H3F3B-212ENST00000592643 PNMA8AQ86V59 439 aaPredicted RBP14.7□□□□□ -0.06
H3F3B-212ENST00000592643 SMC1BQ8NDV3 1235 aa14.7□□□□□ -0.06
H3F3B-212ENST00000592643 PCDHB15Q9Y5E8 787 aa14.7□□□□□ -0.06
H3F3B-212ENST00000592643 PCDHAC2Q9Y5I4 1007 aa14.7□□□□□ -0.06
H3F3B-212ENST00000592643 IFIT1P09914 478 aaKnown RBP14.69□□□□□ -0.06
H3F3B-212ENST00000592643 USP17L8P0C7I0 530 aa14.69□□□□□ -0.06
H3F3B-212ENST00000592643 SLC5A1P13866 664 aa14.69□□□□□ -0.06
H3F3B-212ENST00000592643 RPAP2Q8IXW5 612 aaPredicted RBP14.69□□□□□ -0.06
H3F3B-212ENST00000592643 C16orf71Q8IYS4 520 aaPredicted RBP14.69□□□□□ -0.06
H3F3B-212ENST00000592643 FBXW7Q969H0 707 aa14.69□□□□□ -0.06
H3F3B-212ENST00000592643 ZBED3Q96IU2 234 aaPredicted RBP14.69□□□□□ -0.06
H3F3B-212ENST00000592643 EXOC6BQ9Y2D4 811 aa14.69□□□□□ -0.06
H3F3B-212ENST00000592643 PASKQ96RG2 1323 aa14.68□□□□□ -0.06
H3F3B-212ENST00000592643 G3BP1Q13283 466 aaKnown RBP eCLIP14.68□□□□□ -0.062e-8■□□□□ 10.3
H3F3B-212ENST00000592643 CCDC102BQ68D86 513 aa14.68□□□□□ -0.06
H3F3B-212ENST00000592643 KIAA0825Q8IV33 1275 aa14.68□□□□□ -0.06
H3F3B-212ENST00000592643 XAGE2Q96GT9 111 aa14.68□□□□□ -0.06
H3F3B-212ENST00000592643 SUPT16HQ9Y5B9 1047 aaKnown RBP14.68□□□□□ -0.06
H3F3B-212ENST00000592643 H7C1D1 291 aa14.67□□□□□ -0.06
H3F3B-212ENST00000592643 ZBTB22O15209 634 aa14.67□□□□□ -0.06
H3F3B-212ENST00000592643 FKBP1AP62942 108 aaKnown RBP14.67□□□□□ -0.06
H3F3B-212ENST00000592643 TNNI3KQ59H18 835 aa14.67□□□□□ -0.06
H3F3B-212ENST00000592643 CAVIN4Q5BKX8 364 aa14.67□□□□□ -0.06
H3F3B-212ENST00000592643 RBM26Q5T8P6 1007 aaKnown RBP14.67□□□□□ -0.06
H3F3B-212ENST00000592643 EAF2Q96CJ1 260 aaPredicted RBP14.67□□□□□ -0.06
H3F3B-212ENST00000592643 MYOZ2Q9NPC6 264 aa14.67□□□□□ -0.06
H3F3B-212ENST00000592643 TLR7Q9NYK1 1049 aaKnown RBP14.67□□□□□ -0.06
H3F3B-212ENST00000592643 FPGT-TNNI3KV9GXZ4 949 aa14.67□□□□□ -0.06
H3F3B-212ENST00000592643 ARAP2Q8WZ64 1704 aa14.66□□□□□ -0.06
H3F3B-212ENST00000592643 TRAF5O00463 557 aa14.66□□□□□ -0.06
H3F3B-212ENST00000592643 HSPA6P17066 643 aa14.66□□□□□ -0.06
H3F3B-212ENST00000592643 HTRA3P83110 453 aa14.66□□□□□ -0.06
H3F3B-212ENST00000592643 RASGRF1Q13972 1273 aa14.66□□□□□ -0.06
H3F3B-212ENST00000592643 SCARF1Q14162 830 aa14.66□□□□□ -0.06
H3F3B-212ENST00000592643 KIF4BQ2VIQ3 1234 aa14.66□□□□□ -0.06
H3F3B-212ENST00000592643 NBPF9Q3BBW0 867 aa14.66□□□□□ -0.06
H3F3B-212ENST00000592643 MFSD14BQ5SR56 506 aa14.66□□□□□ -0.06
H3F3B-212ENST00000592643 CNTROBQ8N137 903 aa14.66□□□□□ -0.06
H3F3B-212ENST00000592643 DBNDD2Q9BQY9 259 aa14.66□□□□□ -0.06
H3F3B-212ENST00000592643 GPR108Q9NPR9 543 aa14.66□□□□□ -0.06
H3F3B-212ENST00000592643 DBNLQ9UJU6 430 aaKnown RBP14.66□□□□□ -0.06
H3F3B-212ENST00000592643 MYO3BQ8WXR4 1341 aa14.66□□□□□ -0.06
H3F3B-212ENST00000592643 CHAF1AQ13111 956 aaPredicted RBP14.65□□□□□ -0.06
H3F3B-212ENST00000592643 PI16Q6UXB8 463 aa14.65□□□□□ -0.06
H3F3B-212ENST00000592643 VPS37DQ86XT2 251 aa14.65□□□□□ -0.06
H3F3B-212ENST00000592643 ZC3H15Q8WU90 426 aaKnown RBP14.65□□□□□ -0.06
H3F3B-212ENST00000592643 RNF216Q9NWF9 866 aaPredicted RBP14.65□□□□□ -0.06
H3F3B-212ENST00000592643 SCAF8Q9UPN6 1271 aaKnown RBP14.65□□□□□ -0.06
H3F3B-212ENST00000592643 CLEC11AQ9Y240 323 aa14.65□□□□□ -0.06
H3F3B-212ENST00000592643 F8W031 263 aaPredicted RBP14.64□□□□□ -0.07
H3F3B-212ENST00000592643 WNT10BO00744 389 aa14.64□□□□□ -0.07
H3F3B-212ENST00000592643 RHPN1Q8TCX5 695 aa14.64□□□□□ -0.07
H3F3B-212ENST00000592643 GLIS2Q9BZE0 524 aaPredicted RBP14.64□□□□□ -0.07
H3F3B-212ENST00000592643 AKAP2Q9Y2D5 859 aa14.64□□□□□ -0.07
H3F3B-212ENST00000592643 PCNTO95613 3336 aa14.64□□□□□ -0.07
H3F3B-212ENST00000592643 MTMR14Q8NCE2 650 aa14.63□□□□□ -0.07
H3F3B-212ENST00000592643 EXOC6Q8TAG9 804 aa14.63□□□□□ -0.07
H3F3B-212ENST00000592643 ZNF384Q8TF68 577 aa14.63□□□□□ -0.07
H3F3B-212ENST00000592643 NEUROD6Q96NK8 337 aa14.63□□□□□ -0.07
H3F3B-212ENST00000592643 CCDC8Q9H0W5 538 aaPredicted RBP14.63□□□□□ -0.07
H3F3B-212ENST00000592643 CHMP4BQ9H444 224 aaKnown RBP14.63□□□□□ -0.07
H3F3B-212ENST00000592643 IL1RAPL2Q9NP60 686 aa14.63□□□□□ -0.07
H3F3B-212ENST00000592643 GGA3Q9NZ52 723 aa14.63□□□□□ -0.07
H3F3B-212ENST00000592643 HMG20BQ9P0W2 317 aa14.63□□□□□ -0.07
H3F3B-212ENST00000592643 ADM5C9JUS6 153 aa14.62□□□□□ -0.07
H3F3B-212ENST00000592643 ARID4AP29374 1257 aaPredicted RBP14.62□□□□□ -0.07
H3F3B-212ENST00000592643 MCAMP43121 646 aa14.62□□□□□ -0.07
H3F3B-212ENST00000592643 OS9Q13438 667 aaPredicted RBP14.62□□□□□ -0.07
H3F3B-212ENST00000592643 CST9Q5W186 159 aa14.62□□□□□ -0.07
H3F3B-212ENST00000592643 PRMT6Q96LA8 375 aaPredicted RBP14.62□□□□□ -0.07
H3F3B-212ENST00000592643 SPDYE2BA6NHP3 402 aa14.61□□□□□ -0.07
H3F3B-212ENST00000592643 APBB1O00213 710 aa14.61□□□□□ -0.07
H3F3B-212ENST00000592643 HMMRO75330 724 aa14.61□□□□□ -0.07
H3F3B-212ENST00000592643 SPDYE6P0CI01 402 aa14.61□□□□□ -0.07
H3F3B-212ENST00000592643 PRDX5P30044 214 aa14.61□□□□□ -0.07
H3F3B-212ENST00000592643 APLP1P51693 650 aa14.61□□□□□ -0.07
H3F3B-212ENST00000592643 CFAP100Q494V2 611 aa14.61□□□□□ -0.07
H3F3B-212ENST00000592643 ANGEL2Q5VTE6 544 aaKnown RBP14.61□□□□□ -0.07
H3F3B-212ENST00000592643 USP48Q86UV5 1035 aa14.61□□□□□ -0.07
H3F3B-212ENST00000592643 DNAJC5GQ8N7S2 189 aa14.61□□□□□ -0.07
H3F3B-212ENST00000592643 DCTPP1Q9H773 170 aa14.61□□□□□ -0.07
H3F3B-212ENST00000592643 TTF2Q9UNY4 1162 aaKnown RBP14.61□□□□□ -0.07
H3F3B-212ENST00000592643 PDS5AQ29RF7 1337 aaKnown RBP14.61□□□□□ -0.07
H3F3B-212ENST00000592643 SALL1Q9NSC2 1324 aa14.61□□□□□ -0.07
H3F3B-212ENST00000592643 SEMA3EO15041 775 aa14.6□□□□□ -0.07
H3F3B-212ENST00000592643 SMARCA5O60264 1052 aaPredicted RBP14.6□□□□□ -0.07
H3F3B-212ENST00000592643 C1QBPQ07021 282 aaKnown RBP14.6□□□□□ -0.07
H3F3B-212ENST00000592643 OGFOD1Q8N543 542 aa14.6□□□□□ -0.07
H3F3B-212ENST00000592643 TBC1D22AQ8WUA7 517 aa14.6□□□□□ -0.07
H3F3B-212ENST00000592643 FRAT2O75474 233 aaPredicted RBP14.59□□□□□ -0.07
H3F3B-212ENST00000592643 CRKP46108 304 aa14.59□□□□□ -0.07
H3F3B-212ENST00000592643 MMP14P50281 582 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms