RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 TNIP1Q15025 636 aa12.99□□□□□ -0.33
SMAD4-214ENST00000592186 TTF1Q15361 905 aaPredicted RBP12.99□□□□□ -0.33
SMAD4-214ENST00000592186 STRIP1Q5VSL9 837 aa12.99□□□□□ -0.33
SMAD4-214ENST00000592186 TTLL5Q6EMB2 1281 aa12.99□□□□□ -0.33
SMAD4-214ENST00000592186 ZGPATQ8N5A5 531 aaKnown RBP12.99□□□□□ -0.33
SMAD4-214ENST00000592186 TBC1D22AQ8WUA7 517 aa12.99□□□□□ -0.33
SMAD4-214ENST00000592186 HAUS7Q99871 368 aa12.99□□□□□ -0.33
SMAD4-214ENST00000592186 CACNA1SQ13698 1873 aa12.98□□□□□ -0.33
SMAD4-214ENST00000592186 FAM205AQ6ZU69 1335 aa12.98□□□□□ -0.33
SMAD4-214ENST00000592186 USP17L3A6NCW0 530 aa12.98□□□□□ -0.33
SMAD4-214ENST00000592186 USP17L4A6NCW7 530 aa12.98□□□□□ -0.33
SMAD4-214ENST00000592186 FKBP1AP62942 108 aaKnown RBP12.98□□□□□ -0.33
SMAD4-214ENST00000592186 RASSF7Q02833 373 aa12.98□□□□□ -0.33
SMAD4-214ENST00000592186 RASGRF1Q13972 1273 aa12.98□□□□□ -0.33
SMAD4-214ENST00000592186 SPTY2D1Q68D10 685 aaPredicted RBP12.98□□□□□ -0.33
SMAD4-214ENST00000592186 TMED8Q6PL24 325 aaPredicted RBP12.98□□□□□ -0.33
SMAD4-214ENST00000592186 ERICH6Q7L0X2 663 aa12.98□□□□□ -0.33
SMAD4-214ENST00000592186 USP17L1Q7RTZ2 530 aa12.98□□□□□ -0.33
SMAD4-214ENST00000592186 PI4K2BQ8TCG2 481 aa12.98□□□□□ -0.33
SMAD4-214ENST00000592186 DBNDD1Q9H9R9 158 aa12.98□□□□□ -0.33
SMAD4-214ENST00000592186 HMG20BQ9P0W2 317 aa12.98□□□□□ -0.33
SMAD4-214ENST00000592186 ZC3H4Q9UPT8 1303 aaKnown RBP12.97□□□□□ -0.33
SMAD4-214ENST00000592186 FZD9O00144 591 aa12.97□□□□□ -0.33
SMAD4-214ENST00000592186 MCAMP43121 646 aa12.97□□□□□ -0.33
SMAD4-214ENST00000592186 MMP14P50281 582 aa12.97□□□□□ -0.33
SMAD4-214ENST00000592186 EIF6P56537 245 aaKnown RBP12.97□□□□□ -0.33
SMAD4-214ENST00000592186 GTF2IP78347 998 aa12.97□□□□□ -0.33
SMAD4-214ENST00000592186 LRRFIP1Q32MZ4 808 aaKnown RBP12.97□□□□□ -0.33
SMAD4-214ENST00000592186 BOLA2Q9H3K6 86 aa12.97□□□□□ -0.33
SMAD4-214ENST00000592186 SUGT1Q9Y2Z0 365 aa12.97□□□□□ -0.33
SMAD4-214ENST00000592186 FER1L6Q2WGJ9 1857 aa12.97□□□□□ -0.33
SMAD4-214ENST00000592186 GOLGB1Q14789 3259 aaKnown RBP12.97□□□□□ -0.33
SMAD4-214ENST00000592186 SALL1Q9NSC2 1324 aa12.96□□□□□ -0.33
SMAD4-214ENST00000592186 RGS3P49796 1198 aa12.96□□□□□ -0.33
SMAD4-214ENST00000592186 TTC22Q5TAA0 569 aa12.96□□□□□ -0.33
SMAD4-214ENST00000592186 C9orf131Q5VYM1 1079 aa12.96□□□□□ -0.33
SMAD4-214ENST00000592186 EVI5LQ96CN4 794 aa12.96□□□□□ -0.33
SMAD4-214ENST00000592186 PAG1Q9NWQ8 432 aa12.96□□□□□ -0.33
SMAD4-214ENST00000592186 RNF181Q9P0P0 153 aa12.96□□□□□ -0.33
SMAD4-214ENST00000592186 IQSEC3Q9UPP2 1182 aaPredicted RBP12.96□□□□□ -0.33
SMAD4-214ENST00000592186 MYO3BQ8WXR4 1341 aa12.95□□□□□ -0.34
SMAD4-214ENST00000592186 A0A1B0GUL6 1792 aa12.95□□□□□ -0.34
SMAD4-214ENST00000592186 YDJCA8MPS7 323 aa12.95□□□□□ -0.34
SMAD4-214ENST00000592186 VIL1P09327 827 aaKnown RBP12.95□□□□□ -0.34
SMAD4-214ENST00000592186 ZAP70P43403 619 aa12.95□□□□□ -0.34
SMAD4-214ENST00000592186 PRELPP51888 382 aa12.95□□□□□ -0.34
SMAD4-214ENST00000592186 CXCL9Q07325 125 aa12.95□□□□□ -0.34
SMAD4-214ENST00000592186 CHAF1AQ13111 956 aaPredicted RBP12.95□□□□□ -0.34
SMAD4-214ENST00000592186 SCARF1Q14162 830 aa12.95□□□□□ -0.34
SMAD4-214ENST00000592186 BMP2KLQ5H9B9 411 aa12.95□□□□□ -0.34
SMAD4-214ENST00000592186 TSHZ3Q63HK5 1081 aa12.95□□□□□ -0.34
SMAD4-214ENST00000592186 CIAPIN1Q6FI81 312 aa12.95□□□□□ -0.34
SMAD4-214ENST00000592186 CNTROBQ8N137 903 aa12.95□□□□□ -0.34
SMAD4-214ENST00000592186 DNAJC2Q99543 621 aaKnown RBP12.95□□□□□ -0.34
SMAD4-214ENST00000592186 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.95□□□□□ -0.34
SMAD4-214ENST00000592186 SNRKQ9NRH2 765 aa12.95□□□□□ -0.34
SMAD4-214ENST00000592186 FOXD4L1Q9NU39 408 aa12.95□□□□□ -0.34
SMAD4-214ENST00000592186 ARAP2Q8WZ64 1704 aa12.94□□□□□ -0.34
SMAD4-214ENST00000592186 TRIM6-TRIM34B2RNG4 842 aa12.94□□□□□ -0.34
SMAD4-214ENST00000592186 GOLIM4O00461 696 aa12.94□□□□□ -0.34
SMAD4-214ENST00000592186 CYP2E1P05181 493 aaPredicted RBP12.94□□□□□ -0.34
SMAD4-214ENST00000592186 MAP3K12Q12852 859 aa12.94□□□□□ -0.34
SMAD4-214ENST00000592186 MFSD14BQ5SR56 506 aa12.94□□□□□ -0.34
SMAD4-214ENST00000592186 DACT2Q5SW24 774 aa12.94□□□□□ -0.34
SMAD4-214ENST00000592186 ZSCAN25Q6NSZ9 544 aa12.94□□□□□ -0.34
SMAD4-214ENST00000592186 DPY19L2Q6NUT2 758 aa12.94□□□□□ -0.34
SMAD4-214ENST00000592186 FBXW7Q969H0 707 aa12.94□□□□□ -0.34
SMAD4-214ENST00000592186 LRP2BPQ9P2M1 347 aa12.94□□□□□ -0.34
SMAD4-214ENST00000592186 RAD17O75943 681 aa12.93□□□□□ -0.34
SMAD4-214ENST00000592186 LDHBP07195 334 aaKnown RBP12.93□□□□□ -0.34
SMAD4-214ENST00000592186 RPS12P25398 132 aaKnown RBP12.93□□□□□ -0.34
SMAD4-214ENST00000592186 RSBN1LQ6PCB5 846 aaPredicted RBP12.93□□□□□ -0.34
SMAD4-214ENST00000592186 SLF2Q8IX21 1173 aa12.93□□□□□ -0.34
SMAD4-214ENST00000592186 GPC2Q8N158 579 aa12.93□□□□□ -0.34
SMAD4-214ENST00000592186 KBTBD3Q8NAB2 608 aa12.93□□□□□ -0.34
SMAD4-214ENST00000592186 AGBL3Q8NEM8 1001 aa12.93□□□□□ -0.34
SMAD4-214ENST00000592186 MRIQ9BWK5 157 aa12.93□□□□□ -0.34
SMAD4-214ENST00000592186 KCNQ5Q9NR82 932 aa12.93□□□□□ -0.34
SMAD4-214ENST00000592186 ABCF2Q9UG63 623 aa12.93□□□□□ -0.34
SMAD4-214ENST00000592186 MAST3O60307 1309 aa12.93□□□□□ -0.34
SMAD4-214ENST00000592186 HIP1O00291 1037 aa12.92□□□□□ -0.34
SMAD4-214ENST00000592186 PSMD14O00487 310 aa12.92□□□□□ -0.34
SMAD4-214ENST00000592186 ZFYP08048 801 aaPredicted RBP12.92□□□□□ -0.34
SMAD4-214ENST00000592186 GSTO1P78417 241 aa12.92□□□□□ -0.34
SMAD4-214ENST00000592186 PI16Q6UXB8 463 aa12.92□□□□□ -0.34
SMAD4-214ENST00000592186 OGFOD1Q8N543 542 aa12.92□□□□□ -0.34
SMAD4-214ENST00000592186 DPF2Q92785 391 aa12.92□□□□□ -0.34
SMAD4-214ENST00000592186 RILPL2Q969X0 211 aa12.92□□□□□ -0.34
SMAD4-214ENST00000592186 LDHCP07864 332 aa12.91□□□□□ -0.34
SMAD4-214ENST00000592186 SDSP20132 328 aa12.91□□□□□ -0.34
SMAD4-214ENST00000592186 HDLBPQ00341 1268 aaKnown RBP12.91□□□□□ -0.34
SMAD4-214ENST00000592186 TBC1D9Q6ZT07 1266 aa12.91□□□□□ -0.34
SMAD4-214ENST00000592186 FSD1Q9BTV5 496 aa12.91□□□□□ -0.34
SMAD4-214ENST00000592186 RAI14Q9P0K7 980 aa12.91□□□□□ -0.34
SMAD4-214ENST00000592186 HDAC9Q9UKV0 1011 aa12.91□□□□□ -0.34
SMAD4-214ENST00000592186 IDH1O75874 414 aaKnown RBP12.9□□□□□ -0.34
SMAD4-214ENST00000592186 MAP4K4O95819 1239 aaPredicted RBP12.9□□□□□ -0.34
SMAD4-214ENST00000592186 SLC9C2Q5TAH2 1124 aa12.9□□□□□ -0.34
SMAD4-214ENST00000592186 SKAP1Q86WV1 359 aa12.9□□□□□ -0.34
SMAD4-214ENST00000592186 DZIP1Q86YF9 867 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms