RNA–Protein interactions for RNA: ENST00000590701.5

ERCC1-211, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 3

Gene ERCC1, Length 345 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-211ENST00000590701 EFCC1Q9HA90 598 aa18.81■□□□□ 0.6
ERCC1-211ENST00000590701 NEURL1BA8MQ27 555 aa18.8■□□□□ 0.6
ERCC1-211ENST00000590701 APAF1O14727 1248 aa18.8■□□□□ 0.6
ERCC1-211ENST00000590701 ITGA6P23229 1130 aa18.8■□□□□ 0.6
ERCC1-211ENST00000590701 HELBQ8NG08 1087 aaPredicted RBP18.8■□□□□ 0.6
ERCC1-211ENST00000590701 ANKRD2Q9GZV1 360 aa18.8■□□□□ 0.6
ERCC1-211ENST00000590701 RBBP6Q7Z6E9 1792 aaKnown RBP18.79■□□□□ 0.6
ERCC1-211ENST00000590701 TAF5LO75529 589 aa18.79■□□□□ 0.6
ERCC1-211ENST00000590701 SP3Q02447 781 aa18.79■□□□□ 0.6
ERCC1-211ENST00000590701 CFAP100Q494V2 611 aa18.79■□□□□ 0.6
ERCC1-211ENST00000590701 G2E3Q7L622 706 aa18.79■□□□□ 0.6
ERCC1-211ENST00000590701 ARMC5Q96C12 935 aa18.79■□□□□ 0.6
ERCC1-211ENST00000590701 MPHOSPH8Q99549 860 aa18.79■□□□□ 0.6
ERCC1-211ENST00000590701 COLQQ9Y215 455 aaPredicted RBP18.79■□□□□ 0.6
ERCC1-211ENST00000590701 JAG2Q9Y219 1238 aa18.79■□□□□ 0.6
ERCC1-211ENST00000590701 KCNJ4P48050 445 aa18.78■□□□□ 0.6
ERCC1-211ENST00000590701 CHRNDQ07001 517 aa18.78■□□□□ 0.6
ERCC1-211ENST00000590701 SUPT20HL1Q3ZLR7 823 aa18.78■□□□□ 0.6
ERCC1-211ENST00000590701 MTMR14Q8NCE2 650 aa18.78■□□□□ 0.6
ERCC1-211ENST00000590701 VEZTQ9HBM0 779 aa18.78■□□□□ 0.6
ERCC1-211ENST00000590701 BRCA2P51587 3418 aa18.77■□□□□ 0.6
ERCC1-211ENST00000590701 ECM29Q5VYK3 1845 aa18.77■□□□□ 0.6
ERCC1-211ENST00000590701 NEXNQ0ZGT2 675 aa18.77■□□□□ 0.6
ERCC1-211ENST00000590701 DDX10Q13206 875 aaKnown RBP18.77■□□□□ 0.6
ERCC1-211ENST00000590701 OTUD7BQ6GQQ9 843 aa18.77■□□□□ 0.6
ERCC1-211ENST00000590701 LAMB1P07942 1786 aa18.76■□□□□ 0.59
ERCC1-211ENST00000590701 MYCP01106 439 aaPredicted RBP18.76■□□□□ 0.59
ERCC1-211ENST00000590701 CSF1RP07333 972 aa18.76■□□□□ 0.59
ERCC1-211ENST00000590701 IREB2P48200 963 aaKnown RBP18.76■□□□□ 0.59
ERCC1-211ENST00000590701 TMEM106CQ9BVX2 250 aa18.76■□□□□ 0.59
ERCC1-211ENST00000590701 ELP3Q9H9T3 547 aa18.76■□□□□ 0.59
ERCC1-211ENST00000590701 IRS2Q9Y4H2 1338 aa18.75■□□□□ 0.59
ERCC1-211ENST00000590701 TESPA1A2RU30 521 aaPredicted RBP18.75■□□□□ 0.59
ERCC1-211ENST00000590701 SPDYE2BA6NHP3 402 aa18.75■□□□□ 0.59
ERCC1-211ENST00000590701 SPDYE6P0CI01 402 aa18.75■□□□□ 0.59
ERCC1-211ENST00000590701 RBM5P52756 815 aaKnown RBP eCLIP18.75■□□□□ 0.59
ERCC1-211ENST00000590701 CASP7P55210 303 aa18.75■□□□□ 0.59
ERCC1-211ENST00000590701 RASA3Q14644 834 aa18.75■□□□□ 0.59
ERCC1-211ENST00000590701 CNKSR2Q8WXI2 1034 aa18.75■□□□□ 0.59
ERCC1-211ENST00000590701 PPP2R3BQ9Y5P8 575 aa18.75■□□□□ 0.59
ERCC1-211ENST00000590701 COL1A1P02452 1464 aaPredicted RBP18.75■□□□□ 0.59
ERCC1-211ENST00000590701 UNCXA6NJT0 531 aa18.74■□□□□ 0.59
ERCC1-211ENST00000590701 MYO1BO43795 1136 aa18.74■□□□□ 0.59
ERCC1-211ENST00000590701 GCKRQ14397 625 aa18.74■□□□□ 0.59
ERCC1-211ENST00000590701 ANKRD13AQ8IZ07 590 aa18.74■□□□□ 0.59
ERCC1-211ENST00000590701 OPTNQ96CV9 577 aa18.74■□□□□ 0.59
ERCC1-211ENST00000590701 ZNF333Q96JL9 665 aa18.74■□□□□ 0.59
ERCC1-211ENST00000590701 MS4A4AQ96JQ5 239 aa18.74■□□□□ 0.59
ERCC1-211ENST00000590701 PLA2G12BQ9BX93 195 aa18.74■□□□□ 0.59
ERCC1-211ENST00000590701 PTCH2Q9Y6C5 1203 aa18.74■□□□□ 0.59
ERCC1-211ENST00000590701 TSR2Q969E8 191 aaKnown RBP18.73■□□□□ 0.59
ERCC1-211ENST00000590701 SLC4A2P04920 1241 aa18.72■□□□□ 0.59
ERCC1-211ENST00000590701 IL1R1P14778 569 aa18.72■□□□□ 0.59
ERCC1-211ENST00000590701 CALD1Q05682 793 aaKnown RBP18.72■□□□□ 0.59
ERCC1-211ENST00000590701 CDAN1Q8IWY9 1227 aa18.72■□□□□ 0.59
ERCC1-211ENST00000590701 ANKRD18BA2A2Z9 1011 aa18.71■□□□□ 0.59
ERCC1-211ENST00000590701 PLIN1O60240 522 aa18.71■□□□□ 0.59
ERCC1-211ENST00000590701 SLC4A8Q2Y0W8 1093 aa18.71■□□□□ 0.59
ERCC1-211ENST00000590701 BRI3BPQ8WY22 251 aa18.71■□□□□ 0.59
ERCC1-211ENST00000590701 STK31Q9BXU1 1019 aa18.71■□□□□ 0.59
ERCC1-211ENST00000590701 TDRD3Q9H7E2 651 aaKnown RBP18.71■□□□□ 0.59
ERCC1-211ENST00000590701 OTOFQ9HC10 1997 aa18.71■□□□□ 0.59
ERCC1-211ENST00000590701 H0YGN5 161 aa18.7■□□□□ 0.58
ERCC1-211ENST00000590701 TAF1CQ15572 869 aaPredicted RBP18.7■□□□□ 0.58
ERCC1-211ENST00000590701 SLC9C1Q4G0N8 1177 aa18.7■□□□□ 0.58
ERCC1-211ENST00000590701 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.7■□□□□ 0.58
ERCC1-211ENST00000590701 C15orf52Q6ZUT6 534 aaKnown RBP18.7■□□□□ 0.58
ERCC1-211ENST00000590701 CHMP4AQ9BY43 222 aa18.7■□□□□ 0.58
ERCC1-211ENST00000590701 ZNF70Q9UC06 446 aaPredicted RBP18.7■□□□□ 0.58
ERCC1-211ENST00000590701 ZSWIM8A7E2V4 1837 aa18.7■□□□□ 0.58
ERCC1-211ENST00000590701 CCL15-CCL14A0A0B4J2E2 113 aa18.69■□□□□ 0.58
ERCC1-211ENST00000590701 ECM2O94769 699 aaPredicted RBP18.69■□□□□ 0.58
ERCC1-211ENST00000590701 CCL15Q16663 113 aa18.69■□□□□ 0.58
ERCC1-211ENST00000590701 ZNF804AQ7Z570 1209 aa18.69■□□□□ 0.58
ERCC1-211ENST00000590701 NBPF11Q86T75 865 aa18.69■□□□□ 0.58
ERCC1-211ENST00000590701 FAM43AQ8N2R8 423 aa18.69■□□□□ 0.58
ERCC1-211ENST00000590701 SH3TC2Q8TF17 1288 aa18.69■□□□□ 0.58
ERCC1-211ENST00000590701 ZNF594Q96JF6 807 aaPredicted RBP18.69■□□□□ 0.58
ERCC1-211ENST00000590701 ARHGAP39Q9C0H5 1083 aa18.69■□□□□ 0.58
ERCC1-211ENST00000590701 ZFYVE28Q9HCC9 887 aa18.69■□□□□ 0.58
ERCC1-211ENST00000590701 CEP290O15078 2479 aa18.68■□□□□ 0.58
ERCC1-211ENST00000590701 FKBP1AP62942 108 aaKnown RBP18.68■□□□□ 0.58
ERCC1-211ENST00000590701 FOXO4P98177 505 aa18.68■□□□□ 0.58
ERCC1-211ENST00000590701 OTUD5Q96G74 571 aa18.68■□□□□ 0.58
ERCC1-211ENST00000590701 TEPSINQ96N21 525 aa18.68■□□□□ 0.58
ERCC1-211ENST00000590701 CHMP3Q9Y3E7 222 aa18.68■□□□□ 0.58
ERCC1-211ENST00000590701 A0A1B0GUL6 1792 aa18.68■□□□□ 0.58
ERCC1-211ENST00000590701 TCP10L2B9ZVM9 353 aa18.67■□□□□ 0.58
ERCC1-211ENST00000590701 MAP3K9P80192 1104 aa18.67■□□□□ 0.58
ERCC1-211ENST00000590701 TMEM39BQ9GZU3 492 aa18.67■□□□□ 0.58
ERCC1-211ENST00000590701 TRIOBPQ9H2D6 2365 aa18.67■□□□□ 0.58
ERCC1-211ENST00000590701 IFIT5Q13325 482 aaKnown RBP18.66■□□□□ 0.58
ERCC1-211ENST00000590701 ARHGEF6Q15052 776 aa18.66■□□□□ 0.58
ERCC1-211ENST00000590701 TWISTNBQ3B726 338 aaPredicted RBP18.66■□□□□ 0.58
ERCC1-211ENST00000590701 SPDYE2Q495Y8 402 aa18.66■□□□□ 0.58
ERCC1-211ENST00000590701 TTF2Q9UNY4 1162 aaKnown RBP18.66■□□□□ 0.58
ERCC1-211ENST00000590701 GTF2A2P52657 109 aa18.65■□□□□ 0.58
ERCC1-211ENST00000590701 FLIIQ13045 1269 aa18.65■□□□□ 0.58
ERCC1-211ENST00000590701 VGLL4Q14135 290 aa18.65■□□□□ 0.58
ERCC1-211ENST00000590701 DNAAF4Q8WXU2 420 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms