RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 ADORA1P30542 326 aa23.99■■□□□ 1.43
CIRBP-220ENST00000588917 VIL1P09327 827 aaKnown RBP23.98■■□□□ 1.43
CIRBP-220ENST00000588917 ZNF512BQ96KM6 892 aaPredicted RBP23.98■■□□□ 1.43
CIRBP-220ENST00000588917 DBNDD2Q9BQY9 259 aa23.98■■□□□ 1.43
CIRBP-220ENST00000588917 DENND2AQ9ULE3 1009 aa23.98■■□□□ 1.43
CIRBP-220ENST00000588917 GJA3Q9Y6H8 435 aa23.98■■□□□ 1.43
CIRBP-220ENST00000588917 SMARCA5O60264 1052 aaPredicted RBP23.97■■□□□ 1.43
CIRBP-220ENST00000588917 GTF2IP78347 998 aa23.97■■□□□ 1.43
CIRBP-220ENST00000588917 TTC39AQ5SRH9 613 aa23.97■■□□□ 1.43
CIRBP-220ENST00000588917 CCDC136Q96JN2 1154 aa23.97■■□□□ 1.43
CIRBP-220ENST00000588917 DBNLQ9UJU6 430 aaKnown RBP23.97■■□□□ 1.43
CIRBP-220ENST00000588917 COL4A5P29400 1685 aa23.96■■□□□ 1.43
CIRBP-220ENST00000588917 FAM205AQ6ZU69 1335 aa23.96■■□□□ 1.43
CIRBP-220ENST00000588917 MYO3BQ8WXR4 1341 aa23.96■■□□□ 1.43
CIRBP-220ENST00000588917 DDNO94850 711 aaPredicted RBP23.96■■□□□ 1.43
CIRBP-220ENST00000588917 RPS12P25398 132 aaKnown RBP23.96■■□□□ 1.43
CIRBP-220ENST00000588917 PHKA1P46020 1223 aa23.96■■□□□ 1.43
CIRBP-220ENST00000588917 MMP14P50281 582 aa23.96■■□□□ 1.43
CIRBP-220ENST00000588917 FKBP1AP62942 108 aaKnown RBP23.96■■□□□ 1.43
CIRBP-220ENST00000588917 TBC1D22AQ8WUA7 517 aa23.96■■□□□ 1.43
CIRBP-220ENST00000588917 BCL11AQ9H165 835 aa23.96■■□□□ 1.43
CIRBP-220ENST00000588917 KCNQ5Q9NR82 932 aa23.96■■□□□ 1.43
CIRBP-220ENST00000588917 ZNF541Q9H0D2 1346 aa23.95■■□□□ 1.42
CIRBP-220ENST00000588917 PSMD14O00487 310 aa23.95■■□□□ 1.42
CIRBP-220ENST00000588917 AGBL3Q8NEM8 1001 aa23.95■■□□□ 1.42
CIRBP-220ENST00000588917 WDR66Q8TBY9 1149 aa23.95■■□□□ 1.42
CIRBP-220ENST00000588917 FBXW7Q969H0 707 aa23.95■■□□□ 1.42
CIRBP-220ENST00000588917 GPATCH3Q96I76 525 aa23.95■■□□□ 1.42
CIRBP-220ENST00000588917 ARID4AP29374 1257 aaPredicted RBP23.94■■□□□ 1.42
CIRBP-220ENST00000588917 DACT2Q5SW24 774 aa23.94■■□□□ 1.42
CIRBP-220ENST00000588917 B4GALNT3Q6L9W6 998 aa23.94■■□□□ 1.42
CIRBP-220ENST00000588917 RSBN1LQ6PCB5 846 aaPredicted RBP23.94■■□□□ 1.42
CIRBP-220ENST00000588917 DPF2Q92785 391 aa23.94■■□□□ 1.42
CIRBP-220ENST00000588917 PPP4R2Q9NY27 417 aa23.94■■□□□ 1.42
CIRBP-220ENST00000588917 IQSEC3Q9UPP2 1182 aaPredicted RBP23.94■■□□□ 1.42
CIRBP-220ENST00000588917 PDS5AQ29RF7 1337 aaKnown RBP23.93■■□□□ 1.42
CIRBP-220ENST00000588917 NUCB1Q02818 461 aa23.93■■□□□ 1.42
CIRBP-220ENST00000588917 CHADLQ6NUI6 762 aa23.93■■□□□ 1.42
CIRBP-220ENST00000588917 CHD1LQ86WJ1 897 aa23.93■■□□□ 1.42
CIRBP-220ENST00000588917 PCNTO95613 3336 aa23.92■■□□□ 1.42
CIRBP-220ENST00000588917 CENPQQ7L2Z9 268 aaPredicted RBP23.92■■□□□ 1.42
CIRBP-220ENST00000588917 ZGPATQ8N5A5 531 aaKnown RBP23.92■■□□□ 1.42
CIRBP-220ENST00000588917 L3MBTL3Q96JM7 780 aaPredicted RBP23.92■■□□□ 1.42
CIRBP-220ENST00000588917 TLR7Q9NYK1 1049 aaKnown RBP23.92■■□□□ 1.42
CIRBP-220ENST00000588917 IQCA1LA6NCM1 817 aa23.91■■□□□ 1.42
CIRBP-220ENST00000588917 LMOD1P29536 600 aaPredicted RBP23.91■■□□□ 1.42
CIRBP-220ENST00000588917 CHAF1AQ13111 956 aaPredicted RBP23.91■■□□□ 1.42
CIRBP-220ENST00000588917 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.91■■□□□ 1.42
CIRBP-220ENST00000588917 SUGT1Q9Y2Z0 365 aa23.91■■□□□ 1.42
CIRBP-220ENST00000588917 SPATA5Q8NB90 893 aa23.9■■□□□ 1.42
CIRBP-220ENST00000588917 ECHDC1Q9NTX5 307 aa23.9■■□□□ 1.42
CIRBP-220ENST00000588917 ARAP2Q8WZ64 1704 aa23.9■■□□□ 1.42
CIRBP-220ENST00000588917 H7C1D1 291 aa23.89■■□□□ 1.41
CIRBP-220ENST00000588917 IGSF3O75054 1194 aa23.89■■□□□ 1.41
CIRBP-220ENST00000588917 ATP5JP18859 108 aa23.89■■□□□ 1.41
CIRBP-220ENST00000588917 GMPSP49915 693 aaPredicted RBP23.89■■□□□ 1.41
CIRBP-220ENST00000588917 RASGRF1Q13972 1273 aa23.89■■□□□ 1.41
CIRBP-220ENST00000588917 MFSD14BQ5SR56 506 aa23.89■■□□□ 1.41
CIRBP-220ENST00000588917 SPTY2D1Q68D10 685 aaPredicted RBP23.89■■□□□ 1.41
CIRBP-220ENST00000588917 OGFOD1Q8N543 542 aa23.89■■□□□ 1.41
CIRBP-220ENST00000588917 HMG20BQ9P0W2 317 aa23.89■■□□□ 1.41
CIRBP-220ENST00000588917 TTC41PQ6P2S7 1318 aa23.88■■□□□ 1.41
CIRBP-220ENST00000588917 COL13A1Q5TAT6 717 aaPredicted RBP23.88■■□□□ 1.41
CIRBP-220ENST00000588917 GMLQ99445 158 aa23.88■■□□□ 1.41
CIRBP-220ENST00000588917 LNPKQ9C0E8 428 aa23.88■■□□□ 1.41
CIRBP-220ENST00000588917 HDAC9Q9UKV0 1011 aa23.88■■□□□ 1.41
CIRBP-220ENST00000588917 ZBTB12Q9Y330 459 aaPredicted RBP23.88■■□□□ 1.41
CIRBP-220ENST00000588917 SALL1Q9NSC2 1324 aa23.87■■□□□ 1.41
CIRBP-220ENST00000588917 ERC2O15083 957 aa23.87■■□□□ 1.41
CIRBP-220ENST00000588917 USP17L8P0C7I0 530 aa23.87■■□□□ 1.41
CIRBP-220ENST00000588917 POTEIP0CG38 1075 aa23.87■■□□□ 1.41
CIRBP-220ENST00000588917 POTEJP0CG39 1038 aa23.87■■□□□ 1.41
CIRBP-220ENST00000588917 MCAMP43121 646 aa23.87■■□□□ 1.41
CIRBP-220ENST00000588917 GPRC5DQ9NZD1 345 aa23.87■■□□□ 1.41
CIRBP-220ENST00000588917 CNOT7Q9UIV1 285 aaKnown RBP23.87■■□□□ 1.41
CIRBP-220ENST00000588917 HACL1Q9UJ83 578 aa23.87■■□□□ 1.41
CIRBP-220ENST00000588917 TAF1DQ9H5J8 278 aaPredicted RBP23.86■■□□□ 1.41
CIRBP-220ENST00000588917 CREBZFQ9NS37 354 aa23.86■■□□□ 1.41
CIRBP-220ENST00000588917 JAG2Q9Y219 1238 aa23.86■■□□□ 1.41
CIRBP-220ENST00000588917 MX1P20591 662 aa23.85■■□□□ 1.41
CIRBP-220ENST00000588917 SCNN1DP51172 638 aa23.85■■□□□ 1.41
CIRBP-220ENST00000588917 LDHDQ86WU2 507 aa23.85■■□□□ 1.41
CIRBP-220ENST00000588917 SCARF1Q14162 830 aa23.84■■□□□ 1.41
CIRBP-220ENST00000588917 TTF1Q15361 905 aaPredicted RBP23.84■■□□□ 1.41
CIRBP-220ENST00000588917 PNMA8AQ86V59 439 aaPredicted RBP23.84■■□□□ 1.41
CIRBP-220ENST00000588917 CERS5Q8N5B7 392 aa23.84■■□□□ 1.41
CIRBP-220ENST00000588917 MXD3Q9BW11 206 aa23.84■■□□□ 1.41
CIRBP-220ENST00000588917 MRIQ9BWK5 157 aa23.84■■□□□ 1.41
CIRBP-220ENST00000588917 STAP2Q9UGK3 403 aa23.84■■□□□ 1.41
CIRBP-220ENST00000588917 MAST3O60307 1309 aa23.84■■□□□ 1.41
CIRBP-220ENST00000588917 GLRX3O76003 335 aaKnown RBP23.83■■□□□ 1.41
CIRBP-220ENST00000588917 LDHBP07195 334 aaKnown RBP23.83■■□□□ 1.41
CIRBP-220ENST00000588917 KIAA0825Q8IV33 1275 aa23.83■■□□□ 1.41
CIRBP-220ENST00000588917 MICALL2Q8IY33 904 aa23.83■■□□□ 1.41
CIRBP-220ENST00000588917 SNRKQ9NRH2 765 aa23.83■■□□□ 1.41
CIRBP-220ENST00000588917 ADARB2Q9NS39 739 aaKnown RBP23.83■■□□□ 1.41
CIRBP-220ENST00000588917 ABCF2Q9UG63 623 aa23.83■■□□□ 1.41
CIRBP-220ENST00000588917 SCN9AQ15858 1988 aa23.82■■□□□ 1.4
CIRBP-220ENST00000588917 HSPA1AP0DMV8 641 aaKnown RBP23.82■■□□□ 1.4
CIRBP-220ENST00000588917 HSPA1BP0DMV9 641 aaKnown RBP23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms