RNA–Protein interactions for RNA: ENST00000588909.1

TPGS2-208, Transcript of tubulin polyglutamylase complex subunit 2, human

TSL 5

Gene TPGS2, Length 348 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPGS2-208	ENST00000588909	FAM84B	Q96KN1	310 aa	Predicted RBP	32.33	■■■□□ 2.77
TPGS2-208	ENST00000588909	ZIC5	Q96T25	663 aa		32.33	■■■□□ 2.77
TPGS2-208	ENST00000588909	UBTFL1	P0CB47	393 aa	Predicted RBP	32.32	■■■□□ 2.76
TPGS2-208	ENST00000588909	HIBADH	P31937	336 aa	Known RBP	32.31	■■■□□ 2.76
TPGS2-208	ENST00000588909	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	32.31	■■■□□ 2.76
TPGS2-208	ENST00000588909	RFX5	P48382	616 aa	Predicted RBP	32.3	■■■□□ 2.76
TPGS2-208	ENST00000588909	TSKS	Q9UJT2	592 aa		32.3	■■■□□ 2.76
TPGS2-208	ENST00000588909	TNN	Q9UQP3	1299 aa		32.3	■■■□□ 2.76
TPGS2-208	ENST00000588909	BCAR3	O75815	825 aa		32.29	■■■□□ 2.76
TPGS2-208	ENST00000588909	HSPA8	P11142	646 aa	Known RBP	32.29	■■■□□ 2.76
TPGS2-208	ENST00000588909	MAP2K2	P36507	400 aa		32.29	■■■□□ 2.76
TPGS2-208	ENST00000588909	RGMB	Q6NW40	437 aa		32.29	■■■□□ 2.76
TPGS2-208	ENST00000588909	MOB2	Q70IA6	237 aa		32.29	■■■□□ 2.76
TPGS2-208	ENST00000588909	VGLL2	Q8N8G2	317 aa		32.29	■■■□□ 2.76
TPGS2-208	ENST00000588909	TDRD7	Q8NHU6	1098 aa	Known RBP	32.29	■■■□□ 2.76
TPGS2-208	ENST00000588909	ZBED3	Q96IU2	234 aa	Predicted RBP	32.28	■■■□□ 2.76
TPGS2-208	ENST00000588909	MEIS3	Q99687	375 aa		32.28	■■■□□ 2.76
TPGS2-208	ENST00000588909	LRRFIP2	Q9Y608	721 aa	Known RBP	32.28	■■■□□ 2.76
TPGS2-208	ENST00000588909	KIF16B	Q96L93	1317 aa		32.27	■■■□□ 2.76
TPGS2-208	ENST00000588909	PDE8B	O95263	885 aa		32.27	■■■□□ 2.76
TPGS2-208	ENST00000588909	ZNF157	P51786	506 aa	Predicted RBP	32.27	■■■□□ 2.76
TPGS2-208	ENST00000588909	DLGAP5	Q15398	846 aa		32.27	■■■□□ 2.76
TPGS2-208	ENST00000588909	FRAT1	Q92837	279 aa	Predicted RBP	32.27	■■■□□ 2.76
TPGS2-208	ENST00000588909	BEGAIN	Q9BUH8	593 aa		32.27	■■■□□ 2.76
TPGS2-208	ENST00000588909	SIL1	Q9H173	461 aa		32.27	■■■□□ 2.76
TPGS2-208	ENST00000588909	PTPN12	Q05209	780 aa	Known RBP	32.26	■■■□□ 2.75
TPGS2-208	ENST00000588909	VPS37D	Q86XT2	251 aa		32.26	■■■□□ 2.75
TPGS2-208	ENST00000588909	CFAP100	Q494V2	611 aa		32.25	■■■□□ 2.75
TPGS2-208	ENST00000588909	AOX1	Q06278	1338 aa		32.25	■■■□□ 2.75
TPGS2-208	ENST00000588909	FAM205A	Q6ZU69	1335 aa		32.25	■■■□□ 2.75
TPGS2-208	ENST00000588909	FAM155A	B1AL88	458 aa	Predicted RBP	32.24	■■■□□ 2.75
TPGS2-208	ENST00000588909	EYA2	O00167	538 aa		32.24	■■■□□ 2.75
TPGS2-208	ENST00000588909	CAPN15	O75808	1086 aa		32.24	■■■□□ 2.75
TPGS2-208	ENST00000588909	MMP14	P50281	582 aa		32.24	■■■□□ 2.75
TPGS2-208	ENST00000588909	CHAF1A	Q13111	956 aa	Predicted RBP	32.24	■■■□□ 2.75
TPGS2-208	ENST00000588909	MFSD14B	Q5SR56	506 aa		32.24	■■■□□ 2.75
TPGS2-208	ENST00000588909	FBXO33	Q7Z6M2	555 aa		32.24	■■■□□ 2.75
TPGS2-208	ENST00000588909	PRDM10	Q9NQV6	1147 aa		32.24	■■■□□ 2.75
TPGS2-208	ENST00000588909	CLRN2	A0PK11	232 aa		32.23	■■■□□ 2.75
TPGS2-208	ENST00000588909	BCAM	P50895	628 aa		32.23	■■■□□ 2.75
TPGS2-208	ENST00000588909	RBM5	P52756	815 aa	Known RBP eCLIP	32.23	■■■□□ 2.75
TPGS2-208	ENST00000588909	FKBP1A	P62942	108 aa	Known RBP	32.23	■■■□□ 2.75
TPGS2-208	ENST00000588909	NOG	Q13253	232 aa		32.23	■■■□□ 2.75
TPGS2-208	ENST00000588909	ARHGAP45	Q92619	1136 aa		32.23	■■■□□ 2.75
TPGS2-208	ENST00000588909	TTLL12	Q14166	644 aa	Predicted RBP	32.22	■■■□□ 2.75
TPGS2-208	ENST00000588909	ATG9A	Q7Z3C6	839 aa		32.22	■■■□□ 2.75
TPGS2-208	ENST00000588909	CLUAP1	Q96AJ1	413 aa		32.22	■■■□□ 2.75
TPGS2-208	ENST00000588909	UBE2Q2L	H0YL09	131 aa		32.21	■■■□□ 2.75
TPGS2-208	ENST00000588909	FRAT2	O75474	233 aa	Predicted RBP	32.21	■■■□□ 2.75
TPGS2-208	ENST00000588909	TRIM27	P14373	513 aa		32.21	■■■□□ 2.75
TPGS2-208	ENST00000588909	PRKG1	Q13976	671 aa		32.21	■■■□□ 2.75
TPGS2-208	ENST00000588909	GRIK5	Q16478	980 aa		32.21	■■■□□ 2.75
TPGS2-208	ENST00000588909	CAVIN4	Q5BKX8	364 aa		32.21	■■■□□ 2.75
TPGS2-208	ENST00000588909	INTS3	Q68E01	1043 aa	Known RBP	32.21	■■■□□ 2.75
TPGS2-208	ENST00000588909	APOBEC3F	Q8IUX4	373 aa	Known RBP	32.21	■■■□□ 2.75
TPGS2-208	ENST00000588909	PRMT6	Q96LA8	375 aa	Predicted RBP	32.21	■■■□□ 2.75
TPGS2-208	ENST00000588909	PA2G4	Q9UQ80	394 aa	Known RBP	32.21	■■■□□ 2.75
TPGS2-208	ENST00000588909	PUM3	Q15397	648 aa	Known RBP	32.2	■■■□□ 2.75
TPGS2-208	ENST00000588909	TTF2	Q9UNY4	1162 aa	Known RBP	32.2	■■■□□ 2.75
TPGS2-208	ENST00000588909	SPDYE2B	A6NHP3	402 aa		32.19	■■■□□ 2.74
TPGS2-208	ENST00000588909	SPDYE6	P0CI01	402 aa		32.19	■■■□□ 2.74
TPGS2-208	ENST00000588909	FGFR2	P21802	821 aa		32.19	■■■□□ 2.74
TPGS2-208	ENST00000588909	MTMR14	Q8NCE2	650 aa		32.19	■■■□□ 2.74
TPGS2-208	ENST00000588909	CCDC102A	Q96A19	550 aa		32.19	■■■□□ 2.74
TPGS2-208	ENST00000588909	FZD1	Q9UP38	647 aa		32.19	■■■□□ 2.74
TPGS2-208	ENST00000588909	PAPPA2	Q9BXP8	1791 aa		32.18	■■■□□ 2.74
TPGS2-208	ENST00000588909	KIF23	Q02241	960 aa	Predicted RBP	32.18	■■■□□ 2.74
TPGS2-208	ENST00000588909	ATF7IP	Q6VMQ6	1270 aa		32.18	■■■□□ 2.74
TPGS2-208	ENST00000588909	VEZT	Q9HBM0	779 aa		32.18	■■■□□ 2.74
TPGS2-208	ENST00000588909	IPO8	O15397	1037 aa	Known RBP	32.17	■■■□□ 2.74
TPGS2-208	ENST00000588909	SLC10A3	P09131	477 aa		32.17	■■■□□ 2.74
TPGS2-208	ENST00000588909	IFIT1	P09914	478 aa	Known RBP	32.17	■■■□□ 2.74
TPGS2-208	ENST00000588909	FKBP1B	P68106	108 aa		32.17	■■■□□ 2.74
TPGS2-208	ENST00000588909	DEFB129	Q9H1M3	183 aa		32.17	■■■□□ 2.74
TPGS2-208	ENST00000588909	RASAL3	Q86YV0	1011 aa		32.16	■■■□□ 2.74
TPGS2-208	ENST00000588909	NF2	P35240	595 aa		32.15	■■■□□ 2.74
TPGS2-208	ENST00000588909	MYO1B	O43795	1136 aa		32.14	■■■□□ 2.74
TPGS2-208	ENST00000588909	SLC5A1	P13866	664 aa		32.14	■■■□□ 2.74
TPGS2-208	ENST00000588909	GNAI3	P08754	354 aa		32.13	■■■□□ 2.73
TPGS2-208	ENST00000588909	LPIN2	Q92539	896 aa		32.13	■■■□□ 2.73
TPGS2-208	ENST00000588909	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	32.13	■■■□□ 2.73
TPGS2-208	ENST00000588909	HDAC5	Q9UQL6	1122 aa		32.13	■■■□□ 2.73
TPGS2-208	ENST00000588909	CIAO1	O76071	339 aa		32.12	■■■□□ 2.73
TPGS2-208	ENST00000588909	TDRD3	Q9H7E2	651 aa	Known RBP	32.12	■■■□□ 2.73
TPGS2-208	ENST00000588909	CEP126	Q9P2H0	1117 aa		32.12	■■■□□ 2.73
TPGS2-208	ENST00000588909	CRK	P46108	304 aa		32.11	■■■□□ 2.73
TPGS2-208	ENST00000588909	ATP2B3	Q16720	1220 aa		32.11	■■■□□ 2.73
TPGS2-208	ENST00000588909	SERPINA10	Q9UK55	444 aa		32.11	■■■□□ 2.73
TPGS2-208	ENST00000588909	ARAP2	Q8WZ64	1704 aa		32.1	■■■□□ 2.73
TPGS2-208	ENST00000588909	SRGAP3	O43295	1099 aa		32.1	■■■□□ 2.73
TPGS2-208	ENST00000588909	MKRN3	Q13064	507 aa	Known RBP	32.1	■■■□□ 2.73
TPGS2-208	ENST00000588909	TMEM57	Q8N5G2	664 aa		32.1	■■■□□ 2.73
TPGS2-208	ENST00000588909	ZKSCAN2	Q63HK3	967 aa		32.09	■■■□□ 2.73
TPGS2-208	ENST00000588909	DZIP1L	Q8IYY4	767 aa	Known RBP	32.09	■■■□□ 2.73
TPGS2-208	ENST00000588909	CSRNP1	Q96S65	589 aa		32.09	■■■□□ 2.73
TPGS2-208	ENST00000588909	ZNF70	Q9UC06	446 aa	Predicted RBP	32.09	■■■□□ 2.73
TPGS2-208	ENST00000588909	ANGEL1	Q9UNK9	670 aa	Known RBP	32.09	■■■□□ 2.73
TPGS2-208	ENST00000588909	CA12	O43570	354 aa		32.08	■■■□□ 2.73
TPGS2-208	ENST00000588909	IL15	P40933	162 aa	Predicted RBP	32.08	■■■□□ 2.73
TPGS2-208	ENST00000588909	TBC1D22A	Q8WUA7	517 aa		32.08	■■■□□ 2.73

Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms