RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 CHD4Q14839 1912 aa20.65■□□□□ 0.9
SCAMP4-211ENST00000588907 MCAMP43121 646 aa20.64■□□□□ 0.89
SCAMP4-211ENST00000588907 AKAP11Q9UKA4 1901 aa20.63■□□□□ 0.89
SCAMP4-211ENST00000588907 SBF1O95248 1867 aa20.63■□□□□ 0.89
SCAMP4-211ENST00000588907 FAM205AQ6ZU69 1335 aa20.63■□□□□ 0.89
SCAMP4-211ENST00000588907 ZC3H4Q9UPT8 1303 aaKnown RBP20.63■□□□□ 0.89
SCAMP4-211ENST00000588907 DOK7Q18PE1 504 aa20.63■□□□□ 0.89
SCAMP4-211ENST00000588907 TTC22Q5TAA0 569 aa20.63■□□□□ 0.89
SCAMP4-211ENST00000588907 TMED8Q6PL24 325 aaPredicted RBP20.63■□□□□ 0.89
SCAMP4-211ENST00000588907 BOLA2Q9H3K6 86 aa20.63■□□□□ 0.89
SCAMP4-211ENST00000588907 DBNDD1Q9H9R9 158 aa20.63■□□□□ 0.89
SCAMP4-211ENST00000588907 HMG20BQ9P0W2 317 aa20.63■□□□□ 0.89
SCAMP4-211ENST00000588907 PSME4Q14997 1843 aa20.62■□□□□ 0.89
SCAMP4-211ENST00000588907 SALL1Q9NSC2 1324 aa20.62■□□□□ 0.89
SCAMP4-211ENST00000588907 FKBP1AP62942 108 aaKnown RBP20.62■□□□□ 0.89
SCAMP4-211ENST00000588907 LRRFIP1Q32MZ4 808 aaKnown RBP20.62■□□□□ 0.89
SCAMP4-211ENST00000588907 BMP2KLQ5H9B9 411 aa20.62■□□□□ 0.89
SCAMP4-211ENST00000588907 STRIP1Q5VSL9 837 aa20.62■□□□□ 0.89
SCAMP4-211ENST00000588907 TSHZ3Q63HK5 1081 aa20.62■□□□□ 0.89
SCAMP4-211ENST00000588907 CNTROBQ8N137 903 aa20.62■□□□□ 0.89
SCAMP4-211ENST00000588907 SUGT1Q9Y2Z0 365 aa20.62■□□□□ 0.89
SCAMP4-211ENST00000588907 MYO3BQ8WXR4 1341 aa20.61■□□□□ 0.89
SCAMP4-211ENST00000588907 CCDC88AQ3V6T2 1871 aa20.61■□□□□ 0.89
SCAMP4-211ENST00000588907 USP17L3A6NCW0 530 aa20.61■□□□□ 0.89
SCAMP4-211ENST00000588907 USP17L4A6NCW7 530 aa20.61■□□□□ 0.89
SCAMP4-211ENST00000588907 SPTY2D1Q68D10 685 aaPredicted RBP20.61■□□□□ 0.89
SCAMP4-211ENST00000588907 USP17L1Q7RTZ2 530 aa20.61■□□□□ 0.89
SCAMP4-211ENST00000588907 EVI5LQ96CN4 794 aa20.61■□□□□ 0.89
SCAMP4-211ENST00000588907 DNAJC2Q99543 621 aaKnown RBP20.61■□□□□ 0.89
SCAMP4-211ENST00000588907 PAG1Q9NWQ8 432 aa20.61■□□□□ 0.89
SCAMP4-211ENST00000588907 UTRNP46939 3433 aa20.61■□□□□ 0.89
SCAMP4-211ENST00000588907 EIF6P56537 245 aaKnown RBP20.6■□□□□ 0.89
SCAMP4-211ENST00000588907 SCARF1Q14162 830 aa20.6■□□□□ 0.89
SCAMP4-211ENST00000588907 TTLL5Q6EMB2 1281 aa20.6■□□□□ 0.89
SCAMP4-211ENST00000588907 IQSEC3Q9UPP2 1182 aaPredicted RBP20.6■□□□□ 0.89
SCAMP4-211ENST00000588907 COL1A1P02452 1464 aaPredicted RBP20.6■□□□□ 0.89
SCAMP4-211ENST00000588907 RFX7Q2KHR2 1363 aa20.59■□□□□ 0.89
SCAMP4-211ENST00000588907 FZD9O00144 591 aa20.59■□□□□ 0.89
SCAMP4-211ENST00000588907 CHAF1AQ13111 956 aaPredicted RBP20.59■□□□□ 0.89
SCAMP4-211ENST00000588907 TNIP1Q15025 636 aa20.59■□□□□ 0.89
SCAMP4-211ENST00000588907 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.59■□□□□ 0.89
SCAMP4-211ENST00000588907 COL4A5P29400 1685 aa20.58■□□□□ 0.89
SCAMP4-211ENST00000588907 TRIM6-TRIM34B2RNG4 842 aa20.58■□□□□ 0.89
SCAMP4-211ENST00000588907 GOLIM4O00461 696 aa20.58■□□□□ 0.89
SCAMP4-211ENST00000588907 ZAP70P43403 619 aa20.58■□□□□ 0.89
SCAMP4-211ENST00000588907 MMP14P50281 582 aa20.58■□□□□ 0.89
SCAMP4-211ENST00000588907 GTF2IP78347 998 aa20.58■□□□□ 0.89
SCAMP4-211ENST00000588907 RNF181Q9P0P0 153 aa20.58■□□□□ 0.89
SCAMP4-211ENST00000588907 TIAM2Q8IVF5 1701 aa20.58■□□□□ 0.88
SCAMP4-211ENST00000588907 MAST3O60307 1309 aa20.57■□□□□ 0.88
SCAMP4-211ENST00000588907 YDJCA8MPS7 323 aa20.57■□□□□ 0.88
SCAMP4-211ENST00000588907 CYP2E1P05181 493 aaPredicted RBP20.57■□□□□ 0.88
SCAMP4-211ENST00000588907 MAP3K12Q12852 859 aa20.57■□□□□ 0.88
SCAMP4-211ENST00000588907 MFSD14BQ5SR56 506 aa20.57■□□□□ 0.88
SCAMP4-211ENST00000588907 ZSCAN25Q6NSZ9 544 aa20.57■□□□□ 0.88
SCAMP4-211ENST00000588907 SNRKQ9NRH2 765 aa20.57■□□□□ 0.88
SCAMP4-211ENST00000588907 SCN9AQ15858 1988 aa20.57■□□□□ 0.88
SCAMP4-211ENST00000588907 AK9Q5TCS8 1911 aa20.57■□□□□ 0.88
SCAMP4-211ENST00000588907 DOCK2Q92608 1830 aa20.56■□□□□ 0.88
SCAMP4-211ENST00000588907 HIP1O00291 1037 aa20.56■□□□□ 0.88
SCAMP4-211ENST00000588907 GSPT1P15170 499 aaKnown RBP20.56■□□□□ 0.88
SCAMP4-211ENST00000588907 PRELPP51888 382 aa20.56■□□□□ 0.88
SCAMP4-211ENST00000588907 DACT2Q5SW24 774 aa20.56■□□□□ 0.88
SCAMP4-211ENST00000588907 C9orf131Q5VYM1 1079 aa20.56■□□□□ 0.88
SCAMP4-211ENST00000588907 CIAPIN1Q6FI81 312 aa20.56■□□□□ 0.88
SCAMP4-211ENST00000588907 PI16Q6UXB8 463 aa20.56■□□□□ 0.88
SCAMP4-211ENST00000588907 KBTBD3Q8NAB2 608 aa20.56■□□□□ 0.88
SCAMP4-211ENST00000588907 FBXW7Q969H0 707 aa20.56■□□□□ 0.88
SCAMP4-211ENST00000588907 LRP2BPQ9P2M1 347 aa20.56■□□□□ 0.88
SCAMP4-211ENST00000588907 MAST2Q6P0Q8 1798 aa20.55■□□□□ 0.88
SCAMP4-211ENST00000588907 ZFYP08048 801 aaPredicted RBP20.55■□□□□ 0.88
SCAMP4-211ENST00000588907 VIL1P09327 827 aaKnown RBP20.55■□□□□ 0.88
SCAMP4-211ENST00000588907 RPS12P25398 132 aaKnown RBP20.55■□□□□ 0.88
SCAMP4-211ENST00000588907 ERICH6Q7L0X2 663 aa20.55■□□□□ 0.88
SCAMP4-211ENST00000588907 SKAP1Q86WV1 359 aa20.55■□□□□ 0.88
SCAMP4-211ENST00000588907 ABCF2Q9UG63 623 aa20.55■□□□□ 0.88
SCAMP4-211ENST00000588907 LDHBP07195 334 aaKnown RBP20.54■□□□□ 0.88
SCAMP4-211ENST00000588907 SDSP20132 328 aa20.54■□□□□ 0.88
SCAMP4-211ENST00000588907 CXCL9Q07325 125 aa20.54■□□□□ 0.88
SCAMP4-211ENST00000588907 RSBN1LQ6PCB5 846 aaPredicted RBP20.54■□□□□ 0.88
SCAMP4-211ENST00000588907 SLF2Q8IX21 1173 aa20.54■□□□□ 0.88
SCAMP4-211ENST00000588907 AGBL3Q8NEM8 1001 aa20.54■□□□□ 0.88
SCAMP4-211ENST00000588907 RILPL2Q969X0 211 aa20.54■□□□□ 0.88
SCAMP4-211ENST00000588907 FSD1Q9BTV5 496 aa20.54■□□□□ 0.88
SCAMP4-211ENST00000588907 ZNF646O15015 1829 aaPredicted RBP20.53■□□□□ 0.88
SCAMP4-211ENST00000588907 RAD17O75943 681 aa20.53■□□□□ 0.88
SCAMP4-211ENST00000588907 GSTO1P78417 241 aa20.53■□□□□ 0.88
SCAMP4-211ENST00000588907 CASC1Q6TDU7 716 aa20.53■□□□□ 0.88
SCAMP4-211ENST00000588907 MYH7P12883 1935 aa20.53■□□□□ 0.88
SCAMP4-211ENST00000588907 PSMD14O00487 310 aa20.52■□□□□ 0.88
SCAMP4-211ENST00000588907 IDH1O75874 414 aaKnown RBP20.52■□□□□ 0.88
SCAMP4-211ENST00000588907 DZIP1Q86YF9 867 aaKnown RBP20.52■□□□□ 0.88
SCAMP4-211ENST00000588907 GPC2Q8N158 579 aa20.52■□□□□ 0.88
SCAMP4-211ENST00000588907 ANTXR1Q9H6X2 564 aa20.52■□□□□ 0.88
SCAMP4-211ENST00000588907 RAI14Q9P0K7 980 aa20.52■□□□□ 0.88
SCAMP4-211ENST00000588907 NDUFB9Q9Y6M9 179 aa20.52■□□□□ 0.88
SCAMP4-211ENST00000588907 MAP4K4O95819 1239 aaPredicted RBP20.51■□□□□ 0.87
SCAMP4-211ENST00000588907 DPY19L2Q6NUT2 758 aa20.51■□□□□ 0.87
SCAMP4-211ENST00000588907 PIH1D3Q9NQM4 214 aaKnown RBP20.51■□□□□ 0.87
SCAMP4-211ENST00000588907 JAG2Q9Y219 1238 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 140.9 ms