RNA–Protein interactions for RNA: ENST00000588875.2

SEC11C-205, Transcript of SEC11 homolog C, signal peptidase complex subunit, humanhuman

TSL 2 BASIC

Gene SEC11C, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11C-205ENST00000588875 STK31Q9BXU1 1019 aa21.3■■□□□ 1
SEC11C-205ENST00000588875 PRKRIP1Q9H875 184 aaPredicted RBP21.3■■□□□ 1
SEC11C-205ENST00000588875 COL1A1P02452 1464 aaPredicted RBP21.3■■□□□ 1
SEC11C-205ENST00000588875 AOX1Q06278 1338 aa21.29■■□□□ 1
SEC11C-205ENST00000588875 CLRN2A0PK11 232 aa21.29■■□□□ 1
SEC11C-205ENST00000588875 PPP1R12BO60237 982 aaPredicted RBP21.29■■□□□ 1
SEC11C-205ENST00000588875 TAF5LO75529 589 aa21.29■■□□□ 1
SEC11C-205ENST00000588875 SLC4A2P04920 1241 aa21.29■■□□□ 1
SEC11C-205ENST00000588875 GJA5P36382 358 aa21.29■■□□□ 1
SEC11C-205ENST00000588875 CFAP100Q494V2 611 aa21.29■■□□□ 1
SEC11C-205ENST00000588875 HABP4Q5JVS0 413 aaKnown RBP21.29■■□□□ 1
SEC11C-205ENST00000588875 NBPF12Q5TAG4 269 aaPredicted RBP21.29■■□□□ 1
SEC11C-205ENST00000588875 HELBQ8NG08 1087 aaPredicted RBP21.29■■□□□ 1
SEC11C-205ENST00000588875 PRMT6Q96LA8 375 aaPredicted RBP21.29■■□□□ 1
SEC11C-205ENST00000588875 PPP2R3BQ9Y5P8 575 aa21.29■■□□□ 1
SEC11C-205ENST00000588875 F8W031 263 aaPredicted RBP21.28■■□□□ 1
SEC11C-205ENST00000588875 USP2O75604 605 aaPredicted RBP21.28■■□□□ 1
SEC11C-205ENST00000588875 CAP1Q01518 475 aa21.28■■□□□ 1
SEC11C-205ENST00000588875 C15orf52Q6ZUT6 534 aaKnown RBP21.28■■□□□ 1
SEC11C-205ENST00000588875 CD99L2Q8TCZ2 262 aa21.28■■□□□ 1
SEC11C-205ENST00000588875 PTPN22Q9Y2R2 807 aa21.28■■□□□ 1
SEC11C-205ENST00000588875 MYH3P11055 1940 aa21.27■■□□□ 1
SEC11C-205ENST00000588875 SPDYE2BA6NHP3 402 aa21.27■■□□□ 1
SEC11C-205ENST00000588875 UNCXA6NJT0 531 aa21.27■■□□□ 1
SEC11C-205ENST00000588875 SPDYE6P0CI01 402 aa21.27■■□□□ 1
SEC11C-205ENST00000588875 CRHR2Q13324 411 aa21.27■■□□□ 1
SEC11C-205ENST00000588875 SUPT20HL1Q3ZLR7 823 aa21.27■■□□□ 1
SEC11C-205ENST00000588875 PTPN18Q99952 460 aa21.27■■□□□ 1
SEC11C-205ENST00000588875 IL1R1P14778 569 aa21.26■□□□□ 0.99
SEC11C-205ENST00000588875 TWISTNBQ3B726 338 aaPredicted RBP21.26■□□□□ 0.99
SEC11C-205ENST00000588875 ERO1AQ96HE7 468 aa21.26■□□□□ 0.99
SEC11C-205ENST00000588875 ANKRD18BA2A2Z9 1011 aa21.25■□□□□ 0.99
SEC11C-205ENST00000588875 VEZTQ9HBM0 779 aa21.25■□□□□ 0.99
SEC11C-205ENST00000588875 JAG2Q9Y219 1238 aa21.25■□□□□ 0.99
SEC11C-205ENST00000588875 CENPFP49454 3210 aa21.25■□□□□ 0.99
SEC11C-205ENST00000588875 TESPA1A2RU30 521 aaPredicted RBP21.24■□□□□ 0.99
SEC11C-205ENST00000588875 EN2P19622 333 aaPredicted RBP21.24■□□□□ 0.99
SEC11C-205ENST00000588875 FKBP1AP62942 108 aaKnown RBP21.24■□□□□ 0.99
SEC11C-205ENST00000588875 FLIIQ13045 1269 aa21.24■□□□□ 0.99
SEC11C-205ENST00000588875 RASA3Q14644 834 aa21.24■□□□□ 0.99
SEC11C-205ENST00000588875 ARMC5Q96C12 935 aa21.24■□□□□ 0.99
SEC11C-205ENST00000588875 EFCC1Q9HA90 598 aa21.24■□□□□ 0.99
SEC11C-205ENST00000588875 KIAA0100Q14667 2235 aaKnown RBP21.23■□□□□ 0.99
SEC11C-205ENST00000588875 MYO1BO43795 1136 aa21.23■□□□□ 0.99
SEC11C-205ENST00000588875 IREB2P48200 963 aaKnown RBP21.23■□□□□ 0.99
SEC11C-205ENST00000588875 FOXO4P98177 505 aa21.23■□□□□ 0.99
SEC11C-205ENST00000588875 OTUD7BQ6GQQ9 843 aa21.23■□□□□ 0.99
SEC11C-205ENST00000588875 LINS1Q8NG48 757 aa21.23■□□□□ 0.99
SEC11C-205ENST00000588875 DNAAF4Q8WXU2 420 aa21.23■□□□□ 0.99
SEC11C-205ENST00000588875 MYH16Q9H6N6 1097 aa21.23■□□□□ 0.99
SEC11C-205ENST00000588875 ZNF316A6NFI3 1004 aaPredicted RBP21.22■□□□□ 0.99
SEC11C-205ENST00000588875 SP3Q02447 781 aa21.22■□□□□ 0.99
SEC11C-205ENST00000588875 ZNF804AQ7Z570 1209 aa21.22■□□□□ 0.99
SEC11C-205ENST00000588875 ANKRD13AQ8IZ07 590 aa21.22■□□□□ 0.99
SEC11C-205ENST00000588875 FKBP5Q13451 457 aaPredicted RBP21.21■□□□□ 0.99
SEC11C-205ENST00000588875 MS4A4AQ96JQ5 239 aa21.21■□□□□ 0.99
SEC11C-205ENST00000588875 ELP3Q9H9T3 547 aa21.21■□□□□ 0.99
SEC11C-205ENST00000588875 RBM5P52756 815 aaKnown RBP eCLIP21.2■□□□□ 0.98
SEC11C-205ENST00000588875 IFIT5Q13325 482 aaKnown RBP21.2■□□□□ 0.98
SEC11C-205ENST00000588875 WWC1Q8IX03 1113 aa21.2■□□□□ 0.98
SEC11C-205ENST00000588875 BRCA2P51587 3418 aa21.19■□□□□ 0.98
SEC11C-205ENST00000588875 CDAN1Q8IWY9 1227 aa21.19■□□□□ 0.98
SEC11C-205ENST00000588875 OPTNQ96CV9 577 aa21.19■□□□□ 0.98
SEC11C-205ENST00000588875 ZNF70Q9UC06 446 aaPredicted RBP21.19■□□□□ 0.98
SEC11C-205ENST00000588875 PLIN1O60240 522 aa21.18■□□□□ 0.98
SEC11C-205ENST00000588875 CCDC27Q2M243 656 aa21.18■□□□□ 0.98
SEC11C-205ENST00000588875 SPDYE2Q495Y8 402 aa21.18■□□□□ 0.98
SEC11C-205ENST00000588875 EPHA10Q5JZY3 1008 aa21.18■□□□□ 0.98
SEC11C-205ENST00000588875 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.18■□□□□ 0.98
SEC11C-205ENST00000588875 CNKSR2Q8WXI2 1034 aa21.18■□□□□ 0.98
SEC11C-205ENST00000588875 ZNF594Q96JF6 807 aaPredicted RBP21.18■□□□□ 0.98
SEC11C-205ENST00000588875 TEPSINQ96N21 525 aa21.18■□□□□ 0.98
SEC11C-205ENST00000588875 CHMP3Q9Y3E7 222 aa21.18■□□□□ 0.98
SEC11C-205ENST00000588875 LMBR1LQ6UX01 489 aa21.17■□□□□ 0.98
SEC11C-205ENST00000588875 BRI3BPQ8WY22 251 aa21.17■□□□□ 0.98
SEC11C-205ENST00000588875 ZNF333Q96JL9 665 aa21.17■□□□□ 0.98
SEC11C-205ENST00000588875 TDRD3Q9H7E2 651 aaKnown RBP21.17■□□□□ 0.98
SEC11C-205ENST00000588875 FAM205AQ6ZU69 1335 aa21.17■□□□□ 0.98
SEC11C-205ENST00000588875 LAMB1P07942 1786 aa21.17■□□□□ 0.98
SEC11C-205ENST00000588875 F6X3S4 739 aa21.15■□□□□ 0.98
SEC11C-205ENST00000588875 FXR1P51114 621 aaKnown RBP eCLIP21.15■□□□□ 0.98
SEC11C-205ENST00000588875 CCDC184Q52MB2 194 aa21.15■□□□□ 0.98
SEC11C-205ENST00000588875 BEND3Q5T5X7 828 aa21.15■□□□□ 0.98
SEC11C-205ENST00000588875 LDHAL6AQ6ZMR3 332 aa21.15■□□□□ 0.98
SEC11C-205ENST00000588875 TDRD7Q8NHU6 1098 aaKnown RBP21.15■□□□□ 0.98
SEC11C-205ENST00000588875 TTF2Q9UNY4 1162 aaKnown RBP21.15■□□□□ 0.98
SEC11C-205ENST00000588875 PTCH2Q9Y6C5 1203 aa21.15■□□□□ 0.98
SEC11C-205ENST00000588875 ECM29Q5VYK3 1845 aa21.15■□□□□ 0.98
SEC11C-205ENST00000588875 IL16Q14005 1332 aa21.14■□□□□ 0.97
SEC11C-205ENST00000588875 VAMP4O75379 141 aa21.14■□□□□ 0.97
SEC11C-205ENST00000588875 TNFAIP1Q13829 316 aa21.14■□□□□ 0.97
SEC11C-205ENST00000588875 MFSD14BQ5SR56 506 aa21.14■□□□□ 0.97
SEC11C-205ENST00000588875 TMEM106CQ9BVX2 250 aa21.14■□□□□ 0.97
SEC11C-205ENST00000588875 SERPINA10Q9UK55 444 aa21.14■□□□□ 0.97
SEC11C-205ENST00000588875 RBBP6Q7Z6E9 1792 aaKnown RBP21.13■□□□□ 0.97
SEC11C-205ENST00000588875 CCL15-CCL14A0A0B4J2E2 113 aa21.13■□□□□ 0.97
SEC11C-205ENST00000588875 TCP10L2B9ZVM9 353 aa21.13■□□□□ 0.97
SEC11C-205ENST00000588875 MAP3K9P80192 1104 aa21.13■□□□□ 0.97
SEC11C-205ENST00000588875 VGLL4Q14135 290 aa21.13■□□□□ 0.97
SEC11C-205ENST00000588875 TAF1CQ15572 869 aaPredicted RBP21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms