RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 MKRN3Q13064 507 aaKnown RBP23.49■■□□□ 1.35
CCDC43-204ENST00000588687 EPHA10Q5JZY3 1008 aa23.49■■□□□ 1.35
CCDC43-204ENST00000588687 HELBQ8NG08 1087 aaPredicted RBP23.49■■□□□ 1.35
CCDC43-204ENST00000588687 FZD1Q9UP38 647 aa23.49■■□□□ 1.35
CCDC43-204ENST00000588687 KCNJ4P48050 445 aa23.48■■□□□ 1.35
CCDC43-204ENST00000588687 EXOSC9Q06265 439 aaKnown RBP23.48■■□□□ 1.35
CCDC43-204ENST00000588687 MAP3K11Q16584 847 aa23.48■■□□□ 1.35
CCDC43-204ENST00000588687 WDR63Q8IWG1 891 aa23.48■■□□□ 1.35
CCDC43-204ENST00000588687 R3HDMLQ9H3Y0 253 aa23.48■■□□□ 1.35
CCDC43-204ENST00000588687 SPINK5Q9NQ38 1064 aaPredicted RBP23.48■■□□□ 1.35
CCDC43-204ENST00000588687 GPR25O00155 361 aa23.47■■□□□ 1.35
CCDC43-204ENST00000588687 SPRYD7Q5W111 196 aa23.47■■□□□ 1.35
CCDC43-204ENST00000588687 ARMC9Q7Z3E5 817 aa23.47■■□□□ 1.35
CCDC43-204ENST00000588687 DEFB129Q9H1M3 183 aa23.47■■□□□ 1.35
CCDC43-204ENST00000588687 FKBP1AP62942 108 aaKnown RBP23.46■■□□□ 1.35
CCDC43-204ENST00000588687 SREBF2Q12772 1141 aa23.46■■□□□ 1.35
CCDC43-204ENST00000588687 IFIT5Q13325 482 aaKnown RBP23.46■■□□□ 1.35
CCDC43-204ENST00000588687 PRKG1Q13976 671 aa23.46■■□□□ 1.35
CCDC43-204ENST00000588687 PKN2Q16513 984 aaKnown RBP23.46■■□□□ 1.35
CCDC43-204ENST00000588687 ANGEL1Q9UNK9 670 aaKnown RBP23.46■■□□□ 1.35
CCDC43-204ENST00000588687 SPDYE2BA6NHP3 402 aa23.45■■□□□ 1.34
CCDC43-204ENST00000588687 SPDYE6P0CI01 402 aa23.45■■□□□ 1.34
CCDC43-204ENST00000588687 DLGAP5Q15398 846 aa23.45■■□□□ 1.34
CCDC43-204ENST00000588687 PPP2R3BQ9Y5P8 575 aa23.45■■□□□ 1.34
CCDC43-204ENST00000588687 LMBR1LQ6UX01 489 aa23.44■■□□□ 1.34
CCDC43-204ENST00000588687 MRS2Q9HD23 443 aa23.44■■□□□ 1.34
CCDC43-204ENST00000588687 GRM8O00222 908 aa23.43■■□□□ 1.34
CCDC43-204ENST00000588687 ZNF804AQ7Z570 1209 aa23.43■■□□□ 1.34
CCDC43-204ENST00000588687 ZNF594Q96JF6 807 aaPredicted RBP23.43■■□□□ 1.34
CCDC43-204ENST00000588687 CLMNQ96JQ2 1002 aa23.43■■□□□ 1.34
CCDC43-204ENST00000588687 CFAP100Q494V2 611 aa23.42■■□□□ 1.34
CCDC43-204ENST00000588687 PRMT6Q96LA8 375 aaPredicted RBP23.42■■□□□ 1.34
CCDC43-204ENST00000588687 JAG2Q9Y219 1238 aa23.42■■□□□ 1.34
CCDC43-204ENST00000588687 FAM205AQ6ZU69 1335 aa23.41■■□□□ 1.34
CCDC43-204ENST00000588687 CLRN2A0PK11 232 aa23.41■■□□□ 1.34
CCDC43-204ENST00000588687 CHMP3Q9Y3E7 222 aa23.41■■□□□ 1.34
CCDC43-204ENST00000588687 SALL2Q9Y467 1007 aaPredicted RBP23.41■■□□□ 1.34
CCDC43-204ENST00000588687 F8W031 263 aaPredicted RBP23.4■■□□□ 1.34
CCDC43-204ENST00000588687 ZBTB48P10074 688 aaPredicted RBP23.4■■□□□ 1.34
CCDC43-204ENST00000588687 FBXO46Q6PJ61 603 aaPredicted RBP23.4■■□□□ 1.34
CCDC43-204ENST00000588687 KAZALD1Q96I82 304 aa23.4■■□□□ 1.34
CCDC43-204ENST00000588687 WNK4Q96J92 1243 aa23.4■■□□□ 1.34
CCDC43-204ENST00000588687 IGF2BP3O00425 579 aaKnown RBP eCLIP23.39■■□□□ 1.33
CCDC43-204ENST00000588687 FKTNO75072 461 aa23.39■■□□□ 1.33
CCDC43-204ENST00000588687 IFNL1Q8IU54 200 aa23.39■■□□□ 1.33
CCDC43-204ENST00000588687 MANSC4A6NHS7 340 aaPredicted RBP23.38■■□□□ 1.33
CCDC43-204ENST00000588687 UNCXA6NJT0 531 aa23.38■■□□□ 1.33
CCDC43-204ENST00000588687 GJA5P36382 358 aa23.38■■□□□ 1.33
CCDC43-204ENST00000588687 CCDC57Q2TAC2 916 aa23.38■■□□□ 1.33
CCDC43-204ENST00000588687 NBPF12Q5TAG4 269 aaPredicted RBP23.38■■□□□ 1.33
CCDC43-204ENST00000588687 LDHAL6AQ6ZMR3 332 aa23.38■■□□□ 1.33
CCDC43-204ENST00000588687 TDRD7Q8NHU6 1098 aaKnown RBP23.38■■□□□ 1.33
CCDC43-204ENST00000588687 RBBP6Q7Z6E9 1792 aaKnown RBP23.37■■□□□ 1.33
CCDC43-204ENST00000588687 ALDH1A1P00352 501 aa23.37■■□□□ 1.33
CCDC43-204ENST00000588687 MYO1BO43795 1136 aa23.36■■□□□ 1.33
CCDC43-204ENST00000588687 PPP1R12BO60237 982 aaPredicted RBP23.36■■□□□ 1.33
CCDC43-204ENST00000588687 ALDH1L1O75891 902 aa23.36■■□□□ 1.33
CCDC43-204ENST00000588687 SLC10A4Q96EP9 437 aa23.36■■□□□ 1.33
CCDC43-204ENST00000588687 SUCLG2Q96I99 432 aa23.36■■□□□ 1.33
CCDC43-204ENST00000588687 VEZTQ9HBM0 779 aa23.36■■□□□ 1.33
CCDC43-204ENST00000588687 UTYO14607 1347 aa23.35■■□□□ 1.33
CCDC43-204ENST00000588687 USP2O75604 605 aaPredicted RBP23.35■■□□□ 1.33
CCDC43-204ENST00000588687 INHBEP58166 350 aa23.35■■□□□ 1.33
CCDC43-204ENST00000588687 RASA3Q14644 834 aa23.35■■□□□ 1.33
CCDC43-204ENST00000588687 SPDYE2Q495Y8 402 aa23.35■■□□□ 1.33
CCDC43-204ENST00000588687 PRPF38BQ5VTL8 546 aaKnown RBP23.35■■□□□ 1.33
CCDC43-204ENST00000588687 CDAN1Q8IWY9 1227 aa23.35■■□□□ 1.33
CCDC43-204ENST00000588687 PUS3Q9BZE2 481 aaKnown RBP23.35■■□□□ 1.33
CCDC43-204ENST00000588687 CNNM1Q9NRU3 951 aa23.35■■□□□ 1.33
CCDC43-204ENST00000588687 PLIN1O60240 522 aa23.34■■□□□ 1.33
CCDC43-204ENST00000588687 GYG1P46976 350 aa23.34■■□□□ 1.33
CCDC43-204ENST00000588687 UBE4AQ14139 1066 aa23.34■■□□□ 1.33
CCDC43-204ENST00000588687 SUPT20HL1Q3ZLR7 823 aa23.34■■□□□ 1.33
CCDC43-204ENST00000588687 MFSD14BQ5SR56 506 aa23.34■■□□□ 1.33
CCDC43-204ENST00000588687 FAM84BQ96KN1 310 aaPredicted RBP23.34■■□□□ 1.33
CCDC43-204ENST00000588687 TEPSINQ96N21 525 aa23.34■■□□□ 1.33
CCDC43-204ENST00000588687 SERPINA10Q9UK55 444 aa23.34■■□□□ 1.33
CCDC43-204ENST00000588687 ZNF521Q96K83 1311 aa23.33■■□□□ 1.33
CCDC43-204ENST00000588687 TAF7LQ5H9L4 462 aa23.33■■□□□ 1.33
CCDC43-204ENST00000588687 C9orf78Q9NZ63 289 aaPredicted RBP23.33■■□□□ 1.33
CCDC43-204ENST00000588687 RIPOR2Q9Y4F9 1068 aa23.33■■□□□ 1.33
CCDC43-204ENST00000588687 NBPF7P0C2Y1 421 aaPredicted RBP23.32■■□□□ 1.32
CCDC43-204ENST00000588687 RABL6Q3YEC7 729 aaPredicted RBP23.32■■□□□ 1.32
CCDC43-204ENST00000588687 OTOP1Q7RTM1 612 aa23.32■■□□□ 1.32
CCDC43-204ENST00000588687 SRCIN1Q9C0H9 1055 aa23.32■■□□□ 1.32
CCDC43-204ENST00000588687 ZNF70Q9UC06 446 aaPredicted RBP23.32■■□□□ 1.32
CCDC43-204ENST00000588687 TESPA1A2RU30 521 aaPredicted RBP23.31■■□□□ 1.32
CCDC43-204ENST00000588687 IREB2P48200 963 aaKnown RBP23.31■■□□□ 1.32
CCDC43-204ENST00000588687 CAP1Q01518 475 aa23.31■■□□□ 1.32
CCDC43-204ENST00000588687 GRIK5Q16478 980 aa23.31■■□□□ 1.32
CCDC43-204ENST00000588687 PTPN18Q99952 460 aa23.31■■□□□ 1.32
CCDC43-204ENST00000588687 TTF2Q9UNY4 1162 aaKnown RBP23.31■■□□□ 1.32
CCDC43-204ENST00000588687 HIBADHP31937 336 aaKnown RBP23.3■■□□□ 1.32
CCDC43-204ENST00000588687 RBM5P52756 815 aaKnown RBP eCLIP23.3■■□□□ 1.32
CCDC43-204ENST00000588687 CRHR2Q13324 411 aa23.3■■□□□ 1.32
CCDC43-204ENST00000588687 SLC4A10Q6U841 1118 aa23.3■■□□□ 1.32
CCDC43-204ENST00000588687 ANKRD13AQ8IZ07 590 aa23.3■■□□□ 1.32
CCDC43-204ENST00000588687 VGLL2Q8N8G2 317 aa23.3■■□□□ 1.32
CCDC43-204ENST00000588687 TDRD3Q9H7E2 651 aaKnown RBP23.3■■□□□ 1.32
CCDC43-204ENST00000588687 TNFAIP1Q13829 316 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms