RNA–Protein interactions for RNA: ENST00000583311.1

MIR3960-201, Transcript of microRNA 3960, humanhuman

BASIC

Gene MIR3960, Length 91 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR3960-201ENST00000583311 MMP14P50281 582 aa30.1■■■□□ 2.41
MIR3960-201ENST00000583311 CCDC102BQ68D86 513 aa30.1■■■□□ 2.41
MIR3960-201ENST00000583311 ZBTB22O15209 634 aa30.09■■■□□ 2.41
MIR3960-201ENST00000583311 EPS15P42566 896 aa30.09■■■□□ 2.41
MIR3960-201ENST00000583311 MICALL2Q8IY33 904 aa30.09■■■□□ 2.41
MIR3960-201ENST00000583311 CLASRPQ8N2M8 674 aaKnown RBP30.09■■■□□ 2.41
MIR3960-201ENST00000583311 TBC1D22AQ8WUA7 517 aa30.09■■■□□ 2.41
MIR3960-201ENST00000583311 IQSEC3Q9UPP2 1182 aaPredicted RBP30.09■■■□□ 2.41
MIR3960-201ENST00000583311 APBB1O00213 710 aa30.08■■■□□ 2.41
MIR3960-201ENST00000583311 PHKA1P46020 1223 aa30.08■■■□□ 2.41
MIR3960-201ENST00000583311 USP50Q70EL3 339 aaPredicted RBP30.08■■■□□ 2.41
MIR3960-201ENST00000583311 GMLQ99445 158 aa30.08■■■□□ 2.41
MIR3960-201ENST00000583311 DCTPP1Q9H773 170 aa30.08■■■□□ 2.41
MIR3960-201ENST00000583311 TOMM70O94826 608 aa30.07■■■□□ 2.4
MIR3960-201ENST00000583311 USP17L8P0C7I0 530 aa30.07■■■□□ 2.4
MIR3960-201ENST00000583311 IRX6P78412 446 aaPredicted RBP30.07■■■□□ 2.4
MIR3960-201ENST00000583311 OGFOD1Q8N543 542 aa30.07■■■□□ 2.4
MIR3960-201ENST00000583311 DENND2AQ9ULE3 1009 aa30.07■■■□□ 2.4
MIR3960-201ENST00000583311 ZNF646O15015 1829 aaPredicted RBP30.06■■■□□ 2.4
MIR3960-201ENST00000583311 CHAF1AQ13111 956 aaPredicted RBP30.06■■■□□ 2.4
MIR3960-201ENST00000583311 CCDC158Q5M9N0 1113 aa30.06■■■□□ 2.4
MIR3960-201ENST00000583311 HDAC9Q9UKV0 1011 aa30.06■■■□□ 2.4
MIR3960-201ENST00000583311 HDAC1Q13547 482 aaPredicted RBP30.05■■■□□ 2.4
MIR3960-201ENST00000583311 EAPPQ56P03 285 aaPredicted RBP30.05■■■□□ 2.4
MIR3960-201ENST00000583311 MFSD14BQ5SR56 506 aa30.05■■■□□ 2.4
MIR3960-201ENST00000583311 WDR66Q8TBY9 1149 aa30.05■■■□□ 2.4
MIR3960-201ENST00000583311 EAF2Q96CJ1 260 aaPredicted RBP30.05■■■□□ 2.4
MIR3960-201ENST00000583311 MXD3Q9BW11 206 aa30.05■■■□□ 2.4
MIR3960-201ENST00000583311 LRRCC1Q9C099 1032 aa30.05■■■□□ 2.4
MIR3960-201ENST00000583311 IL1RAPL2Q9NP60 686 aa30.05■■■□□ 2.4
MIR3960-201ENST00000583311 JAG2Q9Y219 1238 aa30.05■■■□□ 2.4
MIR3960-201ENST00000583311 UQCRFS1P1P0C7P4 283 aa30.04■■■□□ 2.4
MIR3960-201ENST00000583311 ZNF280AP59817 542 aaPredicted RBP30.04■■■□□ 2.4
MIR3960-201ENST00000583311 AACSQ86V21 672 aa30.04■■■□□ 2.4
MIR3960-201ENST00000583311 MYH13Q9UKX3 1938 aa30.03■■■□□ 2.4
MIR3960-201ENST00000583311 LDHDQ86WU2 507 aa30.03■■■□□ 2.4
MIR3960-201ENST00000583311 RBM46Q8TBY0 533 aaKnown RBP30.03■■■□□ 2.4
MIR3960-201ENST00000583311 DBNDD2Q9BQY9 259 aa30.03■■■□□ 2.4
MIR3960-201ENST00000583311 RWDD1Q9H446 243 aaPredicted RBP30.03■■■□□ 2.4
MIR3960-201ENST00000583311 TTC39AQ5SRH9 613 aa30.02■■■□□ 2.4
MIR3960-201ENST00000583311 KIAA0825Q8IV33 1275 aa30.02■■■□□ 2.4
MIR3960-201ENST00000583311 CCDC8Q9H0W5 538 aaPredicted RBP30.02■■■□□ 2.4
MIR3960-201ENST00000583311 PDS5AQ29RF7 1337 aaKnown RBP30.01■■■□□ 2.4
MIR3960-201ENST00000583311 IFIT2P09913 472 aaKnown RBP30.01■■■□□ 2.39
MIR3960-201ENST00000583311 ARID4AP29374 1257 aaPredicted RBP30.01■■■□□ 2.39
MIR3960-201ENST00000583311 CERS5Q8N5B7 392 aa30.01■■■□□ 2.39
MIR3960-201ENST00000583311 GCC1Q96CN9 775 aa30.01■■■□□ 2.39
MIR3960-201ENST00000583311 DBNLQ9UJU6 430 aaKnown RBP30.01■■■□□ 2.39
MIR3960-201ENST00000583311 CLEC11AQ9Y240 323 aa30.01■■■□□ 2.39
MIR3960-201ENST00000583311 SUGT1Q9Y2Z0 365 aa30.01■■■□□ 2.39
MIR3960-201ENST00000583311 SHTN1A0MZ66 631 aa30■■■□□ 2.39
MIR3960-201ENST00000583311 ZGPATQ8N5A5 531 aaKnown RBP30■■■□□ 2.39
MIR3960-201ENST00000583311 MYOZ2Q9NPC6 264 aa30■■■□□ 2.39
MIR3960-201ENST00000583311 RASGRF1Q13972 1273 aa29.99■■■□□ 2.39
MIR3960-201ENST00000583311 SAMD7Q7Z3H4 446 aa29.99■■■□□ 2.39
MIR3960-201ENST00000583311 SMC1BQ8NDV3 1235 aa29.99■■■□□ 2.39
MIR3960-201ENST00000583311 KIF4BQ2VIQ3 1234 aa29.98■■■□□ 2.39
MIR3960-201ENST00000583311 TBC1D10BQ4KMP7 808 aaPredicted RBP29.98■■■□□ 2.39
MIR3960-201ENST00000583311 ZNF512BQ96KM6 892 aaPredicted RBP29.98■■■□□ 2.39
MIR3960-201ENST00000583311 ZBTB47Q9UFB7 747 aaPredicted RBP29.98■■■□□ 2.39
MIR3960-201ENST00000583311 SALL1Q9NSC2 1324 aa29.97■■■□□ 2.39
MIR3960-201ENST00000583311 F8W031 263 aaPredicted RBP29.97■■■□□ 2.39
MIR3960-201ENST00000583311 FSTL1Q12841 308 aa29.97■■■□□ 2.39
MIR3960-201ENST00000583311 RBM26Q5T8P6 1007 aaKnown RBP29.97■■■□□ 2.39
MIR3960-201ENST00000583311 CHADLQ6NUI6 762 aa29.97■■■□□ 2.39
MIR3960-201ENST00000583311 TRPM4Q8TD43 1214 aa29.97■■■□□ 2.39
MIR3960-201ENST00000583311 ZC3H15Q8WU90 426 aaKnown RBP29.97■■■□□ 2.39
MIR3960-201ENST00000583311 TLR7Q9NYK1 1049 aaKnown RBP29.97■■■□□ 2.39
MIR3960-201ENST00000583311 COL1A1P02452 1464 aaPredicted RBP29.97■■■□□ 2.39
MIR3960-201ENST00000583311 SPATA5Q8NB90 893 aa29.96■■■□□ 2.39
MIR3960-201ENST00000583311 BCL11AQ9H165 835 aa29.96■■■□□ 2.39
MIR3960-201ENST00000583311 TTF2Q9UNY4 1162 aaKnown RBP29.96■■■□□ 2.39
MIR3960-201ENST00000583311 MAST3O60307 1309 aa29.96■■■□□ 2.39
MIR3960-201ENST00000583311 ADAMTSL1Q8N6G6 1762 aa29.95■■■□□ 2.38
MIR3960-201ENST00000583311 POTEIP0CG38 1075 aa29.94■■■□□ 2.38
MIR3960-201ENST00000583311 POTEJP0CG39 1038 aa29.94■■■□□ 2.38
MIR3960-201ENST00000583311 HMG20BQ9P0W2 317 aa29.94■■■□□ 2.38
MIR3960-201ENST00000583311 SMARCA5O60264 1052 aaPredicted RBP29.93■■■□□ 2.38
MIR3960-201ENST00000583311 MCAMP43121 646 aa29.93■■■□□ 2.38
MIR3960-201ENST00000583311 HIRAP54198 1017 aaPredicted RBP29.93■■■□□ 2.38
MIR3960-201ENST00000583311 SPTY2D1Q68D10 685 aaPredicted RBP29.93■■■□□ 2.38
MIR3960-201ENST00000583311 SERPINA10Q9UK55 444 aa29.93■■■□□ 2.38
MIR3960-201ENST00000583311 EGFRP00533 1210 aa29.92■■■□□ 2.38
MIR3960-201ENST00000583311 LDHBP07195 334 aaKnown RBP29.92■■■□□ 2.38
MIR3960-201ENST00000583311 NEFLP07196 543 aa29.92■■■□□ 2.38
MIR3960-201ENST00000583311 HDLBPQ00341 1268 aaKnown RBP29.92■■■□□ 2.38
MIR3960-201ENST00000583311 DLGAP5Q15398 846 aa29.92■■■□□ 2.38
MIR3960-201ENST00000583311 MTMR14Q8NCE2 650 aa29.91■■■□□ 2.38
MIR3960-201ENST00000583311 PGAP2Q9UHJ9 254 aa29.91■■■□□ 2.38
MIR3960-201ENST00000583311 RBM5P52756 815 aaKnown RBP eCLIP29.9■■■□□ 2.38
MIR3960-201ENST00000583311 SCARF1Q14162 830 aa29.9■■■□□ 2.38
MIR3960-201ENST00000583311 GPATCH3Q96I76 525 aa29.9■■■□□ 2.38
MIR3960-201ENST00000583311 MRIQ9BWK5 157 aa29.9■■■□□ 2.38
MIR3960-201ENST00000583311 ABCF2Q9UG63 623 aa29.9■■■□□ 2.38
MIR3960-201ENST00000583311 C1QTNF8P60827 252 aa29.89■■■□□ 2.38
MIR3960-201ENST00000583311 CFAP100Q494V2 611 aa29.89■■■□□ 2.38
MIR3960-201ENST00000583311 ANKRD45Q5TZF3 282 aa29.89■■■□□ 2.38
MIR3960-201ENST00000583311 GRIK5Q16478 980 aa29.88■■■□□ 2.37
MIR3960-201ENST00000583311 ERICH6Q7L0X2 663 aa29.88■■■□□ 2.37
MIR3960-201ENST00000583311 SMC5Q8IY18 1101 aa29.88■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms