RNA–Protein interactions for RNA: ENST00000581662.1

CDK5RAP3-221, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 557 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-221ENST00000581662 DPF2Q92785 391 aa10.65□□□□□ -0.7
CDK5RAP3-221ENST00000581662 DCPSQ96C86 337 aaKnown RBP10.65□□□□□ -0.7
CDK5RAP3-221ENST00000581662 SHISA4Q96DD7 197 aa10.65□□□□□ -0.7
CDK5RAP3-221ENST00000581662 RTFDC1Q9BY42 306 aaPredicted RBP10.65□□□□□ -0.7
CDK5RAP3-221ENST00000581662 ZNF330Q9Y3S2 320 aaPredicted RBP10.65□□□□□ -0.7
CDK5RAP3-221ENST00000581662 YDJCA8MPS7 323 aa10.64□□□□□ -0.71
CDK5RAP3-221ENST00000581662 SREBF2Q12772 1141 aa10.64□□□□□ -0.71
CDK5RAP3-221ENST00000581662 TBC1D10BQ4KMP7 808 aaPredicted RBP10.64□□□□□ -0.71
CDK5RAP3-221ENST00000581662 TPTE2Q6XPS3 522 aa10.64□□□□□ -0.71
CDK5RAP3-221ENST00000581662 DPF3Q92784 378 aa10.64□□□□□ -0.71
CDK5RAP3-221ENST00000581662 LGR6Q9HBX8 967 aa10.64□□□□□ -0.71
CDK5RAP3-221ENST00000581662 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.64□□□□□ -0.71
CDK5RAP3-221ENST00000581662 PIEZO1Q92508 2521 aa10.63□□□□□ -0.71
CDK5RAP3-221ENST00000581662 WTIPA6NIX2 430 aaPredicted RBP10.63□□□□□ -0.71
CDK5RAP3-221ENST00000581662 PPEF1O14829 653 aaPredicted RBP10.63□□□□□ -0.71
CDK5RAP3-221ENST00000581662 GPR37O15354 613 aa10.63□□□□□ -0.71
CDK5RAP3-221ENST00000581662 KIAA2012Q0VF49 1180 aa10.63□□□□□ -0.71
CDK5RAP3-221ENST00000581662 MOB2Q70IA6 237 aa10.63□□□□□ -0.71
CDK5RAP3-221ENST00000581662 DZIP3Q86Y13 1208 aaKnown RBP10.63□□□□□ -0.71
CDK5RAP3-221ENST00000581662 AEBP1Q8IUX7 1158 aa10.63□□□□□ -0.71
CDK5RAP3-221ENST00000581662 SULF1Q8IWU6 871 aa10.63□□□□□ -0.71
CDK5RAP3-221ENST00000581662 ERO1AQ96HE7 468 aa10.63□□□□□ -0.71
CDK5RAP3-221ENST00000581662 PRKD2Q9BZL6 878 aa10.63□□□□□ -0.71
CDK5RAP3-221ENST00000581662 GGA3Q9NZ52 723 aa10.63□□□□□ -0.71
CDK5RAP3-221ENST00000581662 EYSQ5T1H1 3165 aa10.63□□□□□ -0.71
CDK5RAP3-221ENST00000581662 KDM3BQ7LBC6 1761 aa10.62□□□□□ -0.71
CDK5RAP3-221ENST00000581662 ASTN2O75129 1339 aaPredicted RBP10.62□□□□□ -0.71
CDK5RAP3-221ENST00000581662 PRAMEF22A3QJZ6 481 aa10.62□□□□□ -0.71
CDK5RAP3-221ENST00000581662 ACTN4O43707 911 aaKnown RBP10.62□□□□□ -0.71
CDK5RAP3-221ENST00000581662 ALDH1A1P00352 501 aa10.62□□□□□ -0.71
CDK5RAP3-221ENST00000581662 SLC4A8Q2Y0W8 1093 aa10.62□□□□□ -0.71
CDK5RAP3-221ENST00000581662 CD99L2Q8TCZ2 262 aa10.62□□□□□ -0.71
CDK5RAP3-221ENST00000581662 SNX27Q96L92 541 aa10.62□□□□□ -0.71
CDK5RAP3-221ENST00000581662 RNMTO43148 476 aaKnown RBP10.61□□□□□ -0.71
CDK5RAP3-221ENST00000581662 EFCC1Q9HA90 598 aa10.61□□□□□ -0.71
CDK5RAP3-221ENST00000581662 HEG1Q9ULI3 1381 aa10.61□□□□□ -0.71
CDK5RAP3-221ENST00000581662 RPTORQ8N122 1335 aa10.6□□□□□ -0.71
CDK5RAP3-221ENST00000581662 UBE2Q2LH0YL09 131 aa10.6□□□□□ -0.71
CDK5RAP3-221ENST00000581662 A1BGP04217 495 aa10.6□□□□□ -0.71
CDK5RAP3-221ENST00000581662 RDH13Q8NBN7 331 aa10.6□□□□□ -0.71
CDK5RAP3-221ENST00000581662 NLRP7Q8WX94 980 aa10.6□□□□□ -0.71
CDK5RAP3-221ENST00000581662 ZNF496Q96IT1 587 aaPredicted RBP10.6□□□□□ -0.71
CDK5RAP3-221ENST00000581662 CRAMP1Q96RY5 1269 aa10.6□□□□□ -0.71
CDK5RAP3-221ENST00000581662 NR2E3Q9Y5X4 410 aa10.6□□□□□ -0.71
CDK5RAP3-221ENST00000581662 SYNGAP1Q96PV0 1343 aa10.59□□□□□ -0.71
CDK5RAP3-221ENST00000581662 PRUNE2Q8WUY3 3088 aa10.59□□□□□ -0.71
CDK5RAP3-221ENST00000581662 POLR2AP24928 1970 aaKnown RBP10.59□□□□□ -0.71
CDK5RAP3-221ENST00000581662 LAMA2P24043 3122 aaKnown RBP10.59□□□□□ -0.71
CDK5RAP3-221ENST00000581662 KIF4BQ2VIQ3 1234 aa10.59□□□□□ -0.71
CDK5RAP3-221ENST00000581662 LRIT3Q3SXY7 679 aa10.59□□□□□ -0.71
CDK5RAP3-221ENST00000581662 SLC9C1Q4G0N8 1177 aa10.59□□□□□ -0.71
CDK5RAP3-221ENST00000581662 SUPT20HQ8NEM7 779 aa10.59□□□□□ -0.71
CDK5RAP3-221ENST00000581662 DAXXQ9UER7 740 aaPredicted RBP10.59□□□□□ -0.71
CDK5RAP3-221ENST00000581662 NIP7Q9Y221 180 aaKnown RBP eCLIP10.59□□□□□ -0.71
CDK5RAP3-221ENST00000581662 ZNF652Q9Y2D9 606 aa10.59□□□□□ -0.71
CDK5RAP3-221ENST00000581662 ATP6V0A2Q9Y487 856 aa10.59□□□□□ -0.71
CDK5RAP3-221ENST00000581662 PTCH2Q9Y6C5 1203 aa10.59□□□□□ -0.71
CDK5RAP3-221ENST00000581662 DUOX1Q9NRD9 1551 aa10.58□□□□□ -0.72
CDK5RAP3-221ENST00000581662 DDX11L8A8MPP1 907 aa10.58□□□□□ -0.72
CDK5RAP3-221ENST00000581662 PSMD14O00487 310 aa10.58□□□□□ -0.72
CDK5RAP3-221ENST00000581662 NR1I2O75469 434 aa10.58□□□□□ -0.72
CDK5RAP3-221ENST00000581662 RPS12P25398 132 aaKnown RBP10.58□□□□□ -0.72
CDK5RAP3-221ENST00000581662 NBPF11Q86T75 865 aa10.58□□□□□ -0.72
CDK5RAP3-221ENST00000581662 RPGRQ92834 1020 aaKnown RBP10.58□□□□□ -0.72
CDK5RAP3-221ENST00000581662 HTATIP2Q9BUP3 242 aa10.58□□□□□ -0.72
CDK5RAP3-221ENST00000581662 TEX13AQ9BXU3 409 aaPredicted RBP10.58□□□□□ -0.72
CDK5RAP3-221ENST00000581662 STAP2Q9UGK3 403 aa10.58□□□□□ -0.72
CDK5RAP3-221ENST00000581662 FAM177BA6PVY3 158 aa10.57□□□□□ -0.72
CDK5RAP3-221ENST00000581662 IGF2BP3O00425 579 aaKnown RBP eCLIP10.57□□□□□ -0.72
CDK5RAP3-221ENST00000581662 TCERG1O14776 1098 aaKnown RBP10.57□□□□□ -0.72
CDK5RAP3-221ENST00000581662 BMP8BP34820 402 aa10.57□□□□□ -0.72
CDK5RAP3-221ENST00000581662 GUCD1Q96NT3 240 aa10.57□□□□□ -0.72
CDK5RAP3-221ENST00000581662 TLL1O43897 1013 aa10.56□□□□□ -0.72
CDK5RAP3-221ENST00000581662 SPRYD7Q5W111 196 aa10.56□□□□□ -0.72
CDK5RAP3-221ENST00000581662 NPM2Q86SE8 214 aaKnown RBP10.56□□□□□ -0.72
CDK5RAP3-221ENST00000581662 TTC5Q8N0Z6 440 aa10.56□□□□□ -0.72
CDK5RAP3-221ENST00000581662 GDF15Q99988 308 aa10.56□□□□□ -0.72
CDK5RAP3-221ENST00000581662 RTL9Q8NET4 1388 aa10.55□□□□□ -0.72
CDK5RAP3-221ENST00000581662 MYCP01106 439 aaPredicted RBP10.55□□□□□ -0.72
CDK5RAP3-221ENST00000581662 CRHR2Q13324 411 aa10.55□□□□□ -0.72
CDK5RAP3-221ENST00000581662 ANGEL2Q5VTE6 544 aaKnown RBP10.55□□□□□ -0.72
CDK5RAP3-221ENST00000581662 NUTM1Q86Y26 1132 aa10.55□□□□□ -0.72
CDK5RAP3-221ENST00000581662 RBM17Q96I25 401 aaKnown RBP10.55□□□□□ -0.72
CDK5RAP3-221ENST00000581662 TMUB1Q9BVT8 246 aa10.55□□□□□ -0.72
CDK5RAP3-221ENST00000581662 SSC5DA1L4H1 1573 aa10.55□□□□□ -0.72
CDK5RAP3-221ENST00000581662 COL3A1P02461 1466 aaPredicted RBP10.55□□□□□ -0.72
CDK5RAP3-221ENST00000581662 IBTKQ9P2D0 1353 aaPredicted RBP10.54□□□□□ -0.72
CDK5RAP3-221ENST00000581662 PIP4K2AP48426 406 aaPredicted RBP10.54□□□□□ -0.72
CDK5RAP3-221ENST00000581662 SP3Q02447 781 aa10.54□□□□□ -0.72
CDK5RAP3-221ENST00000581662 PUS10Q3MIT2 529 aaKnown RBP10.54□□□□□ -0.72
CDK5RAP3-221ENST00000581662 ZNF790Q6PG37 636 aa10.54□□□□□ -0.72
CDK5RAP3-221ENST00000581662 DPP8Q6V1X1 898 aaPredicted RBP10.54□□□□□ -0.72
CDK5RAP3-221ENST00000581662 Q6ZNB5 142 aa10.54□□□□□ -0.72
CDK5RAP3-221ENST00000581662 SH3TC2Q8TF17 1288 aa10.54□□□□□ -0.72
CDK5RAP3-221ENST00000581662 V9GY48 417 aaPredicted RBP10.54□□□□□ -0.72
CDK5RAP3-221ENST00000581662 LAMB1P07942 1786 aa10.54□□□□□ -0.72
CDK5RAP3-221ENST00000581662 MANSC4A6NHS7 340 aaPredicted RBP10.53□□□□□ -0.72
CDK5RAP3-221ENST00000581662 TNFRSF10AO00220 468 aa10.53□□□□□ -0.72
CDK5RAP3-221ENST00000581662 GFRA3O60609 400 aa10.53□□□□□ -0.72
CDK5RAP3-221ENST00000581662 GTF2E1P29083 439 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms