RNA–Protein interactions for RNA: ENST00000580947.1

SUPT4H1-204, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 4 BASIC

Gene SUPT4H1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-204ENST00000580947 GBA2Q9HCG7 927 aaPredicted RBP13.3□□□□□ -0.28
SUPT4H1-204ENST00000580947 SCAF8Q9UPN6 1271 aaKnown RBP13.3□□□□□ -0.28
SUPT4H1-204ENST00000580947 KIF16BQ96L93 1317 aa13.3□□□□□ -0.28
SUPT4H1-204ENST00000580947 PDE8BO95263 885 aa13.29□□□□□ -0.28
SUPT4H1-204ENST00000580947 FGFR2P21802 821 aa13.29□□□□□ -0.28
SUPT4H1-204ENST00000580947 ATG9AQ7Z3C6 839 aa13.29□□□□□ -0.28
SUPT4H1-204ENST00000580947 FBXO33Q7Z6M2 555 aa13.29□□□□□ -0.28
SUPT4H1-204ENST00000580947 OGFOD1Q8N543 542 aa13.29□□□□□ -0.28
SUPT4H1-204ENST00000580947 MTMR14Q8NCE2 650 aa13.29□□□□□ -0.28
SUPT4H1-204ENST00000580947 MEIS3Q99687 375 aa13.29□□□□□ -0.28
SUPT4H1-204ENST00000580947 TNNQ9UQP3 1299 aa13.29□□□□□ -0.28
SUPT4H1-204ENST00000580947 AOX1Q06278 1338 aa13.29□□□□□ -0.28
SUPT4H1-204ENST00000580947 FAM155AB1AL88 458 aaPredicted RBP13.28□□□□□ -0.28
SUPT4H1-204ENST00000580947 BCAR3O75815 825 aa13.28□□□□□ -0.28
SUPT4H1-204ENST00000580947 UBTFL1P0CB47 393 aaPredicted RBP13.28□□□□□ -0.28
SUPT4H1-204ENST00000580947 TRIM27P14373 513 aa13.28□□□□□ -0.28
SUPT4H1-204ENST00000580947 MAP2K2P36507 400 aa13.28□□□□□ -0.28
SUPT4H1-204ENST00000580947 HUNKP57058 714 aa13.28□□□□□ -0.28
SUPT4H1-204ENST00000580947 HNRNPUQ00839 825 aaKnown RBP eCLIP13.28□□□□□ -0.28
SUPT4H1-204ENST00000580947 ZIC5Q96T25 663 aa13.28□□□□□ -0.28
SUPT4H1-204ENST00000580947 JAG2Q9Y219 1238 aa13.28□□□□□ -0.28
SUPT4H1-204ENST00000580947 PCDHAC2Q9Y5I4 1007 aa13.28□□□□□ -0.28
SUPT4H1-204ENST00000580947 EYA2O00167 538 aa13.27□□□□□ -0.29
SUPT4H1-204ENST00000580947 HSPA8P11142 646 aaKnown RBP13.27□□□□□ -0.29
SUPT4H1-204ENST00000580947 HIBADHP31937 336 aaKnown RBP13.27□□□□□ -0.29
SUPT4H1-204ENST00000580947 MAP2K1Q02750 393 aaPredicted RBP13.27□□□□□ -0.29
SUPT4H1-204ENST00000580947 METTL24Q5JXM2 366 aa13.27□□□□□ -0.29
SUPT4H1-204ENST00000580947 PAXIP1Q6ZW49 1069 aaPredicted RBP13.27□□□□□ -0.29
SUPT4H1-204ENST00000580947 LRRFIP2Q9Y608 721 aaKnown RBP13.27□□□□□ -0.29
SUPT4H1-204ENST00000580947 COL1A1P02452 1464 aaPredicted RBP13.27□□□□□ -0.29
SUPT4H1-204ENST00000580947 SSC5DA1L4H1 1573 aa13.27□□□□□ -0.29
SUPT4H1-204ENST00000580947 CTCFP49711 727 aaPredicted RBP13.26□□□□□ -0.29
SUPT4H1-204ENST00000580947 GRM1Q13255 1194 aa13.26□□□□□ -0.29
SUPT4H1-204ENST00000580947 GRIK5Q16478 980 aa13.26□□□□□ -0.29
SUPT4H1-204ENST00000580947 PRAMEF18Q5VWM3 479 aa13.26□□□□□ -0.29
SUPT4H1-204ENST00000580947 RGMBQ6NW40 437 aa13.26□□□□□ -0.29
SUPT4H1-204ENST00000580947 ZBED9Q6R2W3 1325 aa13.26□□□□□ -0.29
SUPT4H1-204ENST00000580947 ATF7IPQ6VMQ6 1270 aa13.26□□□□□ -0.29
SUPT4H1-204ENST00000580947 C2orf69Q8N8R5 385 aa13.26□□□□□ -0.29
SUPT4H1-204ENST00000580947 PRDM10Q9NQV6 1147 aa13.26□□□□□ -0.29
SUPT4H1-204ENST00000580947 HDAC9Q9UKV0 1011 aa13.26□□□□□ -0.29
SUPT4H1-204ENST00000580947 MYH2Q9UKX2 1941 aa13.26□□□□□ -0.29
SUPT4H1-204ENST00000580947 SPDYE2BA6NHP3 402 aa13.25□□□□□ -0.29
SUPT4H1-204ENST00000580947 CIAO1O76071 339 aa13.25□□□□□ -0.29
SUPT4H1-204ENST00000580947 SPDYE6P0CI01 402 aa13.25□□□□□ -0.29
SUPT4H1-204ENST00000580947 FKBP1BP68106 108 aa13.25□□□□□ -0.29
SUPT4H1-204ENST00000580947 MTX1Q13505 466 aa13.25□□□□□ -0.29
SUPT4H1-204ENST00000580947 PUM3Q15397 648 aaKnown RBP13.25□□□□□ -0.29
SUPT4H1-204ENST00000580947 MOB2Q70IA6 237 aa13.25□□□□□ -0.29
SUPT4H1-204ENST00000580947 TNS4Q8IZW8 715 aa13.25□□□□□ -0.29
SUPT4H1-204ENST00000580947 PRMT6Q96LA8 375 aaPredicted RBP13.25□□□□□ -0.29
SUPT4H1-204ENST00000580947 FBXO3Q9UK99 471 aa13.25□□□□□ -0.29
SUPT4H1-204ENST00000580947 F8W031 263 aaPredicted RBP13.24□□□□□ -0.29
SUPT4H1-204ENST00000580947 SLC10A3P09131 477 aa13.24□□□□□ -0.29
SUPT4H1-204ENST00000580947 BCAMP50895 628 aa13.24□□□□□ -0.29
SUPT4H1-204ENST00000580947 LBX1P52954 281 aa13.24□□□□□ -0.29
SUPT4H1-204ENST00000580947 NOGQ13253 232 aa13.24□□□□□ -0.29
SUPT4H1-204ENST00000580947 DLGAP5Q15398 846 aa13.24□□□□□ -0.29
SUPT4H1-204ENST00000580947 CFAP100Q494V2 611 aa13.24□□□□□ -0.29
SUPT4H1-204ENST00000580947 MFSD14BQ5SR56 506 aa13.24□□□□□ -0.29
SUPT4H1-204ENST00000580947 APOBEC3FQ8IUX4 373 aaKnown RBP13.24□□□□□ -0.29
SUPT4H1-204ENST00000580947 AIDAQ96BJ3 306 aa13.24□□□□□ -0.29
SUPT4H1-204ENST00000580947 COPRSQ9NQ92 184 aa13.24□□□□□ -0.29
SUPT4H1-204ENST00000580947 MYO5AQ9Y4I1 1855 aaKnown RBP13.23□□□□□ -0.29
SUPT4H1-204ENST00000580947 IPO8O15397 1037 aaKnown RBP13.23□□□□□ -0.29
SUPT4H1-204ENST00000580947 IQSEC3Q9UPP2 1182 aaPredicted RBP13.23□□□□□ -0.29
SUPT4H1-204ENST00000580947 PA2G4Q9UQ80 394 aaKnown RBP13.23□□□□□ -0.29
SUPT4H1-204ENST00000580947 GNAI3P08754 354 aa13.22□□□□□ -0.29
SUPT4H1-204ENST00000580947 RASAL3Q86YV0 1011 aa13.22□□□□□ -0.29
SUPT4H1-204ENST00000580947 LPIN2Q92539 896 aa13.22□□□□□ -0.29
SUPT4H1-204ENST00000580947 FRAT1Q92837 279 aaPredicted RBP13.22□□□□□ -0.29
SUPT4H1-204ENST00000580947 CCDC102AQ96A19 550 aa13.22□□□□□ -0.29
SUPT4H1-204ENST00000580947 SIL1Q9H173 461 aa13.22□□□□□ -0.29
SUPT4H1-204ENST00000580947 DEFB129Q9H1M3 183 aa13.22□□□□□ -0.29
SUPT4H1-204ENST00000580947 SERPINA10Q9UK55 444 aa13.22□□□□□ -0.29
SUPT4H1-204ENST00000580947 TTF2Q9UNY4 1162 aaKnown RBP13.22□□□□□ -0.29
SUPT4H1-204ENST00000580947 ZBTB22O15209 634 aa13.21□□□□□ -0.29
SUPT4H1-204ENST00000580947 CAPN15O75808 1086 aa13.21□□□□□ -0.29
SUPT4H1-204ENST00000580947 IFIT1P09914 478 aaKnown RBP13.21□□□□□ -0.29
SUPT4H1-204ENST00000580947 IL15P40933 162 aaPredicted RBP13.21□□□□□ -0.29
SUPT4H1-204ENST00000580947 ZNF157P51786 506 aaPredicted RBP13.21□□□□□ -0.29
SUPT4H1-204ENST00000580947 SPDYE2Q495Y8 402 aa13.21□□□□□ -0.29
SUPT4H1-204ENST00000580947 CAVIN4Q5BKX8 364 aa13.21□□□□□ -0.29
SUPT4H1-204ENST00000580947 TMEM57Q8N5G2 664 aa13.21□□□□□ -0.29
SUPT4H1-204ENST00000580947 CLUAP1Q96AJ1 413 aa13.21□□□□□ -0.29
SUPT4H1-204ENST00000580947 HDAC5Q9UQL6 1122 aa13.21□□□□□ -0.29
SUPT4H1-204ENST00000580947 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.21□□□□□ -0.29
SUPT4H1-204ENST00000580947 AK9Q5TCS8 1911 aa13.21□□□□□ -0.3
SUPT4H1-204ENST00000580947 CLRN2A0PK11 232 aa13.2□□□□□ -0.3
SUPT4H1-204ENST00000580947 UBE2Q2LH0YL09 131 aa13.2□□□□□ -0.3
SUPT4H1-204ENST00000580947 RLBP1P12271 317 aa13.2□□□□□ -0.3
SUPT4H1-204ENST00000580947 SLC5A1P13866 664 aa13.2□□□□□ -0.3
SUPT4H1-204ENST00000580947 HDLBPQ00341 1268 aaKnown RBP13.2□□□□□ -0.3
SUPT4H1-204ENST00000580947 KIF23Q02241 960 aaPredicted RBP13.2□□□□□ -0.3
SUPT4H1-204ENST00000580947 ATP2B3Q16720 1220 aa13.2□□□□□ -0.3
SUPT4H1-204ENST00000580947 LDLRAD1Q5T700 205 aa13.2□□□□□ -0.3
SUPT4H1-204ENST00000580947 ZKSCAN2Q63HK3 967 aa13.2□□□□□ -0.3
SUPT4H1-204ENST00000580947 VPS37DQ86XT2 251 aa13.2□□□□□ -0.3
SUPT4H1-204ENST00000580947 TBC1D22AQ8WUA7 517 aa13.2□□□□□ -0.3
SUPT4H1-204ENST00000580947 TSKSQ9UJT2 592 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms