RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 UQCRFS1P1P0C7P4 283 aa15.19■□□□□ 0.02
CDK5RAP3-217ENST00000580287 COL9A3Q14050 684 aaPredicted RBP15.19■□□□□ 0.02
CDK5RAP3-217ENST00000580287 R3HDM1Q15032 1099 aaKnown RBP15.19■□□□□ 0.02
CDK5RAP3-217ENST00000580287 CAVIN4Q5BKX8 364 aa15.19■□□□□ 0.02
CDK5RAP3-217ENST00000580287 SLC9C2Q5TAH2 1124 aa15.19■□□□□ 0.02
CDK5RAP3-217ENST00000580287 PUS7LQ9H0K6 701 aaKnown RBP15.19■□□□□ 0.02
CDK5RAP3-217ENST00000580287 ABCF2Q9UG63 623 aa15.19■□□□□ 0.02
CDK5RAP3-217ENST00000580287 GOLGA6L3A6NEY3 463 aa15.18■□□□□ 0.02
CDK5RAP3-217ENST00000580287 HIP1O00291 1037 aa15.18■□□□□ 0.02
CDK5RAP3-217ENST00000580287 PRPF40BQ6NWY9 871 aaKnown RBP15.18■□□□□ 0.02
CDK5RAP3-217ENST00000580287 C2CD5Q86YS7 1000 aa15.18■□□□□ 0.02
CDK5RAP3-217ENST00000580287 UPF1Q92900 1129 aaKnown RBP eCLIP15.18■□□□□ 0.02
CDK5RAP3-217ENST00000580287 ZNF512BQ96KM6 892 aaPredicted RBP15.18■□□□□ 0.02
CDK5RAP3-217ENST00000580287 RAD50Q92878 1312 aa15.18■□□□□ 0.02
CDK5RAP3-217ENST00000580287 PSDA5PKW4 1024 aaPredicted RBP15.18■□□□□ 0.02
CDK5RAP3-217ENST00000580287 PDE6BP35913 854 aa15.18■□□□□ 0.02
CDK5RAP3-217ENST00000580287 RAB3GAP1Q15042 981 aa15.18■□□□□ 0.02
CDK5RAP3-217ENST00000580287 MCMDC2Q4G0Z9 681 aa15.18■□□□□ 0.02
CDK5RAP3-217ENST00000580287 FOXD4L5Q5VV16 416 aaPredicted RBP15.18■□□□□ 0.02
CDK5RAP3-217ENST00000580287 ZGPATQ8N5A5 531 aaKnown RBP15.18■□□□□ 0.02
CDK5RAP3-217ENST00000580287 FOXD4L4Q8WXT5 416 aaPredicted RBP15.18■□□□□ 0.02
CDK5RAP3-217ENST00000580287 UPF3BQ9BZI7 483 aaKnown RBP15.18■□□□□ 0.02
CDK5RAP3-217ENST00000580287 POLLQ9UGP5 575 aa15.18■□□□□ 0.02
CDK5RAP3-217ENST00000580287 CCDC171Q6TFL3 1326 aa15.18■□□□□ 0.02
CDK5RAP3-217ENST00000580287 A0A0G2JLW4 131 aa15.17■□□□□ 0.02
CDK5RAP3-217ENST00000580287 PPEF1O14829 653 aaPredicted RBP15.17■□□□□ 0.02
CDK5RAP3-217ENST00000580287 BBOX1O75936 387 aa15.17■□□□□ 0.02
CDK5RAP3-217ENST00000580287 UFL1O94874 794 aa15.17■□□□□ 0.02
CDK5RAP3-217ENST00000580287 CHAF1AQ13111 956 aaPredicted RBP15.17■□□□□ 0.02
CDK5RAP3-217ENST00000580287 FBXO33Q7Z6M2 555 aa15.17■□□□□ 0.02
CDK5RAP3-217ENST00000580287 CRAMP1Q96RY5 1269 aa15.17■□□□□ 0.02
CDK5RAP3-217ENST00000580287 RGPD3A6NKT7 1758 aaPredicted RBP15.17■□□□□ 0.02
CDK5RAP3-217ENST00000580287 RGPD4Q7Z3J3 1758 aa15.17■□□□□ 0.02
CDK5RAP3-217ENST00000580287 CPA1P15085 419 aa15.17■□□□□ 0.02
CDK5RAP3-217ENST00000580287 NPR1P16066 1061 aa15.17■□□□□ 0.02
CDK5RAP3-217ENST00000580287 CDK11BP21127 795 aaKnown RBP15.17■□□□□ 0.02
CDK5RAP3-217ENST00000580287 HIBADHP31937 336 aaKnown RBP15.17■□□□□ 0.02
CDK5RAP3-217ENST00000580287 ZMYM1Q5SVZ6 1142 aa15.17■□□□□ 0.02
CDK5RAP3-217ENST00000580287 GBP4Q96PP9 640 aa15.17■□□□□ 0.02
CDK5RAP3-217ENST00000580287 MAST3O60307 1309 aa15.17■□□□□ 0.02
CDK5RAP3-217ENST00000580287 XDHP47989 1333 aa15.17■□□□□ 0.02
CDK5RAP3-217ENST00000580287 MED23Q9ULK4 1368 aa15.16■□□□□ 0.02
CDK5RAP3-217ENST00000580287 C6orf229H3BNL8 230 aa15.16■□□□□ 0.02
CDK5RAP3-217ENST00000580287 HSPA4P34932 840 aa15.16■□□□□ 0.02
CDK5RAP3-217ENST00000580287 GAS2L3Q86XJ1 694 aa15.16■□□□□ 0.02
CDK5RAP3-217ENST00000580287 CCDC125Q86Z20 511 aa15.16■□□□□ 0.02
CDK5RAP3-217ENST00000580287 RBM8AQ9Y5S9 174 aaKnown RBP15.16■□□□□ 0.02
CDK5RAP3-217ENST00000580287 COL1A1P02452 1464 aaPredicted RBP15.16■□□□□ 0.02
CDK5RAP3-217ENST00000580287 DDX11L8A8MPP1 907 aa15.16■□□□□ 0.02
CDK5RAP3-217ENST00000580287 RIMBP2O15034 1052 aa15.15■□□□□ 0.02
CDK5RAP3-217ENST00000580287 MAGEB6Q8N7X4 407 aa15.15■□□□□ 0.02
CDK5RAP3-217ENST00000580287 MAP4K1Q92918 833 aa15.15■□□□□ 0.02
CDK5RAP3-217ENST00000580287 MASTLQ96GX5 879 aa15.15■□□□□ 0.02
CDK5RAP3-217ENST00000580287 ZNF532Q9HCE3 1301 aa15.15■□□□□ 0.02
CDK5RAP3-217ENST00000580287 FSD2A1L4K1 749 aa15.15■□□□□ 0.02
CDK5RAP3-217ENST00000580287 H0YIN7 160 aa15.15■□□□□ 0.02
CDK5RAP3-217ENST00000580287 PDE6AP16499 860 aa15.15■□□□□ 0.02
CDK5RAP3-217ENST00000580287 ADCK5Q3MIX3 580 aa15.15■□□□□ 0.02
CDK5RAP3-217ENST00000580287 LRP2BPQ9P2M1 347 aa15.15■□□□□ 0.02
CDK5RAP3-217ENST00000580287 SNX14Q9Y5W7 946 aa15.15■□□□□ 0.02
CDK5RAP3-217ENST00000580287 IRS2Q9Y4H2 1338 aa15.15■□□□□ 0.02
CDK5RAP3-217ENST00000580287 ANKRD31Q8N7Z5 1873 aa15.15■□□□□ 0.02
CDK5RAP3-217ENST00000580287 ADD2P35612 726 aa15.14■□□□□ 0.01
CDK5RAP3-217ENST00000580287 TBC1D16Q8TBP0 767 aa15.14■□□□□ 0.01
CDK5RAP3-217ENST00000580287 LARP6Q9BRS8 491 aaKnown RBP15.14■□□□□ 0.01
CDK5RAP3-217ENST00000580287 GGA1Q9UJY5 639 aa15.14■□□□□ 0.01
CDK5RAP3-217ENST00000580287 AKAP11Q9UKA4 1901 aa15.14■□□□□ 0.01
CDK5RAP3-217ENST00000580287 NECTIN1Q15223 517 aa15.14■□□□□ 0.01
CDK5RAP3-217ENST00000580287 PPP1R1BQ9UD71 204 aaPredicted RBP15.14■□□□□ 0.01
CDK5RAP3-217ENST00000580287 ATP6V0A2Q9Y487 856 aa15.14■□□□□ 0.01
CDK5RAP3-217ENST00000580287 TTF1Q15361 905 aaPredicted RBP15.13■□□□□ 0.01
CDK5RAP3-217ENST00000580287 GNL3LQ9NVN8 582 aaKnown RBP15.13■□□□□ 0.01
CDK5RAP3-217ENST00000580287 LEMD3Q9Y2U8 911 aa15.13■□□□□ 0.01
CDK5RAP3-217ENST00000580287 ALDH1B1P30837 517 aa15.13■□□□□ 0.01
CDK5RAP3-217ENST00000580287 TTLL5Q6EMB2 1281 aa15.13■□□□□ 0.01
CDK5RAP3-217ENST00000580287 ADGRA1Q86SQ6 560 aa15.13■□□□□ 0.01
CDK5RAP3-217ENST00000580287 SP8Q8IXZ3 490 aa15.13■□□□□ 0.01
CDK5RAP3-217ENST00000580287 MIGA1Q8NAN2 632 aa15.13■□□□□ 0.01
CDK5RAP3-217ENST00000580287 HELLSQ9NRZ9 838 aa15.13■□□□□ 0.01
CDK5RAP3-217ENST00000580287 FOXP2O15409 715 aa15.13■□□□□ 0.01
CDK5RAP3-217ENST00000580287 DTNBO60941 627 aa15.13■□□□□ 0.01
CDK5RAP3-217ENST00000580287 HSPD1P10809 573 aaKnown RBP15.13■□□□□ 0.01
CDK5RAP3-217ENST00000580287 CREB3L3Q68CJ9 461 aa15.13■□□□□ 0.01
CDK5RAP3-217ENST00000580287 CNKSR2Q8WXI2 1034 aa15.13■□□□□ 0.01
CDK5RAP3-217ENST00000580287 APPBP2Q92624 585 aa15.13■□□□□ 0.01
CDK5RAP3-217ENST00000580287 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.13■□□□□ 0.011e-7■■■□□ 14.8
CDK5RAP3-217ENST00000580287 RAI14Q9P0K7 980 aa15.13■□□□□ 0.01
CDK5RAP3-217ENST00000580287 TCRBV5S4A2TA0A5A2 114 aa15.12■□□□□ 0.01
CDK5RAP3-217ENST00000580287 PRDX5P30044 214 aa15.12■□□□□ 0.01
CDK5RAP3-217ENST00000580287 GRIK5Q16478 980 aa15.12■□□□□ 0.01
CDK5RAP3-217ENST00000580287 ZNF384Q8TF68 577 aa15.12■□□□□ 0.01
CDK5RAP3-217ENST00000580287 SLC27A2O14975 620 aa15.12■□□□□ 0.01
CDK5RAP3-217ENST00000580287 GPAA1O43292 621 aa15.12■□□□□ 0.01
CDK5RAP3-217ENST00000580287 ANAPC15P60006 121 aa15.11■□□□□ 0.01
CDK5RAP3-217ENST00000580287 MAP3K12Q12852 859 aa15.11■□□□□ 0.01
CDK5RAP3-217ENST00000580287 MPNDQ8N594 471 aa15.11■□□□□ 0.01
CDK5RAP3-217ENST00000580287 TMX3Q96JJ7 454 aa15.11■□□□□ 0.01
CDK5RAP3-217ENST00000580287 TCEANC2Q96MN5 208 aa15.11■□□□□ 0.01
CDK5RAP3-217ENST00000580287 DENND2AQ9ULE3 1009 aa15.11■□□□□ 0.01
CDK5RAP3-217ENST00000580287 NRXN2Q9P2S2 1712 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 153.4 ms