RNA–Protein interactions for RNA: ENST00000578845.2

CDKN2A-212, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 2 BASIC

Gene CDKN2A, Length 678 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-212ENST00000578845 USP44Q9H0E7 712 aa28.74■■■□□ 2.19
CDKN2A-212ENST00000578845 MROH5Q6ZUA9 1318 aa28.73■■■□□ 2.19
CDKN2A-212ENST00000578845 PLIN1O60240 522 aa28.73■■■□□ 2.19
CDKN2A-212ENST00000578845 APOBEC3FQ8IUX4 373 aaKnown RBP28.73■■■□□ 2.19
CDKN2A-212ENST00000578845 TSKSQ9UJT2 592 aa28.73■■■□□ 2.19
CDKN2A-212ENST00000578845 SCAF8Q9UPN6 1271 aaKnown RBP28.73■■■□□ 2.19
CDKN2A-212ENST00000578845 COL1A1P02452 1464 aaPredicted RBP28.72■■■□□ 2.19
CDKN2A-212ENST00000578845 FAM205AQ6ZU69 1335 aa28.71■■■□□ 2.19
CDKN2A-212ENST00000578845 KIF23Q02241 960 aaPredicted RBP28.71■■■□□ 2.19
CDKN2A-212ENST00000578845 SMC4Q9NTJ3 1288 aa28.71■■■□□ 2.19
CDKN2A-212ENST00000578845 RASAL3Q86YV0 1011 aa28.7■■■□□ 2.18
CDKN2A-212ENST00000578845 TDRD7Q8NHU6 1098 aaKnown RBP28.7■■■□□ 2.18
CDKN2A-212ENST00000578845 SAGE1Q9NXZ1 904 aa28.7■■■□□ 2.18
CDKN2A-212ENST00000578845 DLGAP5Q15398 846 aa28.69■■■□□ 2.18
CDKN2A-212ENST00000578845 PRAMEF18Q5VWM3 479 aa28.69■■■□□ 2.18
CDKN2A-212ENST00000578845 FAM84BQ96KN1 310 aaPredicted RBP28.69■■■□□ 2.18
CDKN2A-212ENST00000578845 VGLL2Q8N8G2 317 aa28.68■■■□□ 2.18
CDKN2A-212ENST00000578845 HIBADHP31937 336 aaKnown RBP28.67■■■□□ 2.18
CDKN2A-212ENST00000578845 NF2P35240 595 aa28.67■■■□□ 2.18
CDKN2A-212ENST00000578845 LRRC24Q50LG9 513 aa28.67■■■□□ 2.18
CDKN2A-212ENST00000578845 MOB2Q70IA6 237 aa28.67■■■□□ 2.18
CDKN2A-212ENST00000578845 REM2Q8IYK8 340 aaPredicted RBP28.67■■■□□ 2.18
CDKN2A-212ENST00000578845 SPDYE2BA6NHP3 402 aa28.66■■■□□ 2.18
CDKN2A-212ENST00000578845 SPDYE6P0CI01 402 aa28.66■■■□□ 2.18
CDKN2A-212ENST00000578845 GYG1P46976 350 aa28.66■■■□□ 2.18
CDKN2A-212ENST00000578845 ECM29Q5VYK3 1845 aa28.66■■■□□ 2.18
CDKN2A-212ENST00000578845 CSRNP1Q96S65 589 aa28.65■■■□□ 2.18
CDKN2A-212ENST00000578845 ARAP2Q8WZ64 1704 aa28.65■■■□□ 2.18
CDKN2A-212ENST00000578845 UBE2Q2LH0YL09 131 aa28.64■■■□□ 2.18
CDKN2A-212ENST00000578845 PDE8BO95263 885 aa28.64■■■□□ 2.18
CDKN2A-212ENST00000578845 CFAP100Q494V2 611 aa28.64■■■□□ 2.18
CDKN2A-212ENST00000578845 METTL24Q5JXM2 366 aa28.64■■■□□ 2.18
CDKN2A-212ENST00000578845 FBXO33Q7Z6M2 555 aa28.64■■■□□ 2.18
CDKN2A-212ENST00000578845 JAG2Q9Y219 1238 aa28.64■■■□□ 2.18
CDKN2A-212ENST00000578845 PPP2R3BQ9Y5P8 575 aa28.64■■■□□ 2.18
CDKN2A-212ENST00000578845 F8W031 263 aaPredicted RBP28.63■■■□□ 2.17
CDKN2A-212ENST00000578845 ABHD8Q96I13 439 aa28.63■■■□□ 2.17
CDKN2A-212ENST00000578845 DEFB129Q9H1M3 183 aa28.63■■■□□ 2.17
CDKN2A-212ENST00000578845 PCDHAC2Q9Y5I4 1007 aa28.63■■■□□ 2.17
CDKN2A-212ENST00000578845 RFX5P48382 616 aaPredicted RBP28.62■■■□□ 2.17
CDKN2A-212ENST00000578845 MFSD14BQ5SR56 506 aa28.62■■■□□ 2.17
CDKN2A-212ENST00000578845 KLHDC4Q8TBB5 520 aa28.62■■■□□ 2.17
CDKN2A-212ENST00000578845 RNF186Q9NXI6 227 aa28.62■■■□□ 2.17
CDKN2A-212ENST00000578845 KIF16BQ96L93 1317 aa28.62■■■□□ 2.17
CDKN2A-212ENST00000578845 MYO1BO43795 1136 aa28.61■■■□□ 2.17
CDKN2A-212ENST00000578845 PRMT6Q96LA8 375 aaPredicted RBP28.61■■■□□ 2.17
CDKN2A-212ENST00000578845 API5Q9BZZ5 524 aaKnown RBP28.61■■■□□ 2.17
CDKN2A-212ENST00000578845 SERPINA10Q9UK55 444 aa28.61■■■□□ 2.17
CDKN2A-212ENST00000578845 NOB1Q9ULX3 412 aaKnown RBP28.61■■■□□ 2.17
CDKN2A-212ENST00000578845 TTLL12Q14166 644 aaPredicted RBP28.6■■■□□ 2.17
CDKN2A-212ENST00000578845 ARMC9Q7Z3E5 817 aa28.6■■■□□ 2.17
CDKN2A-212ENST00000578845 SSC5DA1L4H1 1573 aa28.59■■■□□ 2.17
CDKN2A-212ENST00000578845 FGFR2P21802 821 aa28.59■■■□□ 2.17
CDKN2A-212ENST00000578845 RARSP54136 660 aaKnown RBP28.59■■■□□ 2.17
CDKN2A-212ENST00000578845 LDLRAD1Q5T700 205 aa28.59■■■□□ 2.17
CDKN2A-212ENST00000578845 AKAP11Q9UKA4 1901 aa28.59■■■□□ 2.17
CDKN2A-212ENST00000578845 CASP8AP2Q9UKL3 1982 aa28.59■■■□□ 2.17
CDKN2A-212ENST00000578845 PTPN12Q05209 780 aaKnown RBP28.58■■■□□ 2.17
CDKN2A-212ENST00000578845 MAP3K11Q16584 847 aa28.58■■■□□ 2.17
CDKN2A-212ENST00000578845 CAVIN4Q5BKX8 364 aa28.58■■■□□ 2.17
CDKN2A-212ENST00000578845 AOX1Q06278 1338 aa28.58■■■□□ 2.17
CDKN2A-212ENST00000578845 EYA2O00167 538 aa28.57■■■□□ 2.16
CDKN2A-212ENST00000578845 TRPA1O75762 1119 aa28.57■■■□□ 2.16
CDKN2A-212ENST00000578845 UBTFL1P0CB47 393 aaPredicted RBP28.57■■■□□ 2.16
CDKN2A-212ENST00000578845 PUM3Q15397 648 aaKnown RBP28.57■■■□□ 2.16
CDKN2A-212ENST00000578845 VPS37DQ86XT2 251 aa28.57■■■□□ 2.16
CDKN2A-212ENST00000578845 TTF2Q9UNY4 1162 aaKnown RBP28.57■■■□□ 2.16
CDKN2A-212ENST00000578845 CLRN2A0PK11 232 aa28.56■■■□□ 2.16
CDKN2A-212ENST00000578845 ARHGAP45Q92619 1136 aa28.56■■■□□ 2.16
CDKN2A-212ENST00000578845 FBXO3Q9UK99 471 aa28.56■■■□□ 2.16
CDKN2A-212ENST00000578845 SPDYE2Q495Y8 402 aa28.55■■■□□ 2.16
CDKN2A-212ENST00000578845 TBC1D22AQ8WUA7 517 aa28.55■■■□□ 2.16
CDKN2A-212ENST00000578845 IFIT1P09914 478 aaKnown RBP28.54■■■□□ 2.16
CDKN2A-212ENST00000578845 RBM5P52756 815 aaKnown RBP eCLIP28.54■■■□□ 2.16
CDKN2A-212ENST00000578845 ATG9AQ7Z3C6 839 aa28.54■■■□□ 2.16
CDKN2A-212ENST00000578845 VEZTQ9HBM0 779 aa28.54■■■□□ 2.16
CDKN2A-212ENST00000578845 ANGEL1Q9UNK9 670 aaKnown RBP28.54■■■□□ 2.16
CDKN2A-212ENST00000578845 UNCXA6NJT0 531 aa28.53■■■□□ 2.16
CDKN2A-212ENST00000578845 TM4SF4P48230 202 aa28.53■■■□□ 2.16
CDKN2A-212ENST00000578845 BCAMP50895 628 aa28.53■■■□□ 2.16
CDKN2A-212ENST00000578845 HDLBPQ00341 1268 aaKnown RBP28.53■■■□□ 2.16
CDKN2A-212ENST00000578845 SUPT20HL1Q3ZLR7 823 aa28.53■■■□□ 2.16
CDKN2A-212ENST00000578845 MCOLN1Q9GZU1 580 aa28.53■■■□□ 2.16
CDKN2A-212ENST00000578845 IQSEC3Q9UPP2 1182 aaPredicted RBP28.53■■■□□ 2.16
CDKN2A-212ENST00000578845 HDAC5Q9UQL6 1122 aa28.53■■■□□ 2.16
CDKN2A-212ENST00000578845 CIAO1O76071 339 aa28.52■■■□□ 2.16
CDKN2A-212ENST00000578845 TNFAIP1Q13829 316 aa28.52■■■□□ 2.16
CDKN2A-212ENST00000578845 PRKG1Q13976 671 aa28.52■■■□□ 2.16
CDKN2A-212ENST00000578845 DZIP1LQ8IYY4 767 aaKnown RBP28.52■■■□□ 2.16
CDKN2A-212ENST00000578845 LPIN2Q92539 896 aa28.52■■■□□ 2.16
CDKN2A-212ENST00000578845 ZNF70Q9UC06 446 aaPredicted RBP28.52■■■□□ 2.16
CDKN2A-212ENST00000578845 PPP1R12BO60237 982 aaPredicted RBP28.51■■■□□ 2.15
CDKN2A-212ENST00000578845 CRKP46108 304 aa28.51■■■□□ 2.15
CDKN2A-212ENST00000578845 RASA3Q14644 834 aa28.51■■■□□ 2.15
CDKN2A-212ENST00000578845 GRIK5Q16478 980 aa28.51■■■□□ 2.15
CDKN2A-212ENST00000578845 INTS3Q68E01 1043 aaKnown RBP28.51■■■□□ 2.15
CDKN2A-212ENST00000578845 FRAT2O75474 233 aaPredicted RBP28.5■■■□□ 2.15
CDKN2A-212ENST00000578845 CHAF1AQ13111 956 aaPredicted RBP28.5■■■□□ 2.15
CDKN2A-212ENST00000578845 MRIQ9BWK5 157 aa28.5■■■□□ 2.15
CDKN2A-212ENST00000578845 FZD1Q9UP38 647 aa28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms