RNA–Protein interactions for RNA: ENST00000578561.1

ERVFRD-3-201, Transcript of endogenous retrovirus group FRD member 3, humanhuman

BASIC

Gene ERVFRD-3, Length 1,617 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFRD-3-201ENST00000578561 DDX11L8A8MPP1 907 aa6.4□□□□□ -1.38
ERVFRD-3-201ENST00000578561 HSP90AA1P07900 732 aaKnown RBP6.4□□□□□ -1.38
ERVFRD-3-201ENST00000578561 MCCP23508 829 aa6.4□□□□□ -1.38
ERVFRD-3-201ENST00000578561 EVA1CP58658 441 aa6.4□□□□□ -1.38
ERVFRD-3-201ENST00000578561 PTH1RQ03431 593 aa6.4□□□□□ -1.38
ERVFRD-3-201ENST00000578561 CWC27Q6UX04 472 aaKnown RBP6.4□□□□□ -1.38
ERVFRD-3-201ENST00000578561 SNIP1Q8TAD8 396 aaKnown RBP6.4□□□□□ -1.38
ERVFRD-3-201ENST00000578561 TTC14Q96N46 770 aa6.4□□□□□ -1.38
ERVFRD-3-201ENST00000578561 SNRKQ9NRH2 765 aa6.4□□□□□ -1.38
ERVFRD-3-201ENST00000578561 BTG4Q9NY30 223 aa6.4□□□□□ -1.38
ERVFRD-3-201ENST00000578561 FCF1Q9Y324 198 aaKnown RBP6.4□□□□□ -1.38
ERVFRD-3-201ENST00000578561 ARFGEF2Q9Y6D5 1785 aa6.4□□□□□ -1.39
ERVFRD-3-201ENST00000578561 ZBTB24O43167 697 aaPredicted RBP6.39□□□□□ -1.39
ERVFRD-3-201ENST00000578561 BAG4O95429 457 aaKnown RBP6.39□□□□□ -1.39
ERVFRD-3-201ENST00000578561 MCM2P49736 904 aa6.39□□□□□ -1.39
ERVFRD-3-201ENST00000578561 TFCP2Q12800 502 aa6.39□□□□□ -1.39
ERVFRD-3-201ENST00000578561 LMBR1LQ6UX01 489 aa6.39□□□□□ -1.39
ERVFRD-3-201ENST00000578561 ATG9AQ7Z3C6 839 aa6.39□□□□□ -1.39
ERVFRD-3-201ENST00000578561 PIGBQ92521 554 aa6.39□□□□□ -1.39
ERVFRD-3-201ENST00000578561 EVI5LQ96CN4 794 aa6.39□□□□□ -1.39
ERVFRD-3-201ENST00000578561 SLC4A9Q96Q91 983 aa6.39□□□□□ -1.39
ERVFRD-3-201ENST00000578561 ISCA1Q9BUE6 129 aa6.39□□□□□ -1.39
ERVFRD-3-201ENST00000578561 UPF3BQ9BZI7 483 aaKnown RBP6.39□□□□□ -1.39
ERVFRD-3-201ENST00000578561 CWC22Q9HCG8 908 aaKnown RBP6.39□□□□□ -1.39
ERVFRD-3-201ENST00000578561 ATG3Q9NT62 314 aa6.39□□□□□ -1.39
ERVFRD-3-201ENST00000578561 DBNLQ9UJU6 430 aaKnown RBP6.39□□□□□ -1.39
ERVFRD-3-201ENST00000578561 ASAP1Q9ULH1 1129 aa6.39□□□□□ -1.39
ERVFRD-3-201ENST00000578561 SLC10A3P09131 477 aa6.39□□□□□ -1.39
ERVFRD-3-201ENST00000578561 NUCB2P80303 420 aa6.39□□□□□ -1.39
ERVFRD-3-201ENST00000578561 MDM2Q00987 491 aaPredicted RBP6.39□□□□□ -1.39
ERVFRD-3-201ENST00000578561 NMIQ13287 307 aaPredicted RBP6.39□□□□□ -1.39
ERVFRD-3-201ENST00000578561 TNNI3KQ59H18 835 aa6.39□□□□□ -1.39
ERVFRD-3-201ENST00000578561 DNAJC10Q8IXB1 793 aa6.39□□□□□ -1.39
ERVFRD-3-201ENST00000578561 NPAS3Q8IXF0 933 aa6.39□□□□□ -1.39
ERVFRD-3-201ENST00000578561 IRF7Q92985 503 aa6.39□□□□□ -1.39
ERVFRD-3-201ENST00000578561 INTS4Q96HW7 963 aaKnown RBP6.39□□□□□ -1.39
ERVFRD-3-201ENST00000578561 GPATCH3Q96I76 525 aa6.39□□□□□ -1.39
ERVFRD-3-201ENST00000578561 FAM227BQ96M60 508 aa6.39□□□□□ -1.39
ERVFRD-3-201ENST00000578561 GBP4Q96PP9 640 aa6.39□□□□□ -1.39
ERVFRD-3-201ENST00000578561 BOLA2Q9H3K6 86 aa6.39□□□□□ -1.39
ERVFRD-3-201ENST00000578561 CWC25Q9NXE8 425 aaPredicted RBP6.39□□□□□ -1.39
ERVFRD-3-201ENST00000578561 TMOD3Q9NYL9 352 aa6.39□□□□□ -1.39
ERVFRD-3-201ENST00000578561 BRPF3Q9ULD4 1205 aa6.39□□□□□ -1.39
ERVFRD-3-201ENST00000578561 FPGT-TNNI3KV9GXZ4 949 aa6.39□□□□□ -1.39
ERVFRD-3-201ENST00000578561 NUP188Q5SRE5 1749 aa6.39□□□□□ -1.39
ERVFRD-3-201ENST00000578561 JCADQ9P266 1359 aa6.38□□□□□ -1.39
ERVFRD-3-201ENST00000578561 MED23Q9ULK4 1368 aa6.38□□□□□ -1.39
ERVFRD-3-201ENST00000578561 TJP1Q07157 1748 aa6.38□□□□□ -1.39
ERVFRD-3-201ENST00000578561 A0A0D9SFI3 127 aa6.38□□□□□ -1.39
ERVFRD-3-201ENST00000578561 WNT7AO00755 349 aa6.38□□□□□ -1.39
ERVFRD-3-201ENST00000578561 SMPD1P17405 629 aa6.38□□□□□ -1.39
ERVFRD-3-201ENST00000578561 ATP5JP18859 108 aa6.38□□□□□ -1.39
ERVFRD-3-201ENST00000578561 COL9A3Q14050 684 aaPredicted RBP6.38□□□□□ -1.39
ERVFRD-3-201ENST00000578561 NECTIN1Q15223 517 aa6.38□□□□□ -1.39
ERVFRD-3-201ENST00000578561 ADCK5Q3MIX3 580 aa6.38□□□□□ -1.39
ERVFRD-3-201ENST00000578561 CCDC191Q8NCU4 936 aa6.38□□□□□ -1.39
ERVFRD-3-201ENST00000578561 MAP4K1Q92918 833 aa6.38□□□□□ -1.39
ERVFRD-3-201ENST00000578561 EDC3Q96F86 508 aaKnown RBP6.38□□□□□ -1.39
ERVFRD-3-201ENST00000578561 GZF1Q9H116 711 aaPredicted RBP6.38□□□□□ -1.39
ERVFRD-3-201ENST00000578561 ZBTB3Q9H5J0 574 aa6.38□□□□□ -1.39
ERVFRD-3-201ENST00000578561 DIAPH3Q9NSV4 1193 aa6.38□□□□□ -1.39
ERVFRD-3-201ENST00000578561 CCDC171Q6TFL3 1326 aa6.37□□□□□ -1.39
ERVFRD-3-201ENST00000578561 COL16A1Q07092 1604 aaPredicted RBP6.37□□□□□ -1.39
ERVFRD-3-201ENST00000578561 AHDC1Q5TGY3 1603 aaPredicted RBP6.37□□□□□ -1.39
ERVFRD-3-201ENST00000578561 BRD1O95696 1058 aa6.37□□□□□ -1.39
ERVFRD-3-201ENST00000578561 CPA1P15085 419 aa6.37□□□□□ -1.39
ERVFRD-3-201ENST00000578561 TRIM28Q13263 835 aaKnown RBP6.37□□□□□ -1.39
ERVFRD-3-201ENST00000578561 TCIRG1Q13488 830 aa6.37□□□□□ -1.39
ERVFRD-3-201ENST00000578561 RUFY3Q7L099 469 aa6.37□□□□□ -1.39
ERVFRD-3-201ENST00000578561 IL27Q8NEV9 243 aa6.37□□□□□ -1.39
ERVFRD-3-201ENST00000578561 RUFY2Q8WXA3 655 aa6.37□□□□□ -1.39
ERVFRD-3-201ENST00000578561 CHAMP1Q96JM3 812 aa6.37□□□□□ -1.39
ERVFRD-3-201ENST00000578561 DBNDD2Q9BQY9 259 aa6.37□□□□□ -1.39
ERVFRD-3-201ENST00000578561 LMBRD1Q9NUN5 540 aa6.37□□□□□ -1.39
ERVFRD-3-201ENST00000578561 NXF1Q9UBU9 619 aaKnown RBP6.37□□□□□ -1.39
ERVFRD-3-201ENST00000578561 BCL9O00512 1426 aa6.37□□□□□ -1.39
ERVFRD-3-201ENST00000578561 COL22A1Q8NFW1 1626 aaPredicted RBP6.37□□□□□ -1.39
ERVFRD-3-201ENST00000578561 HIP1O00291 1037 aa6.36□□□□□ -1.39
ERVFRD-3-201ENST00000578561 CHGBP05060 677 aa6.36□□□□□ -1.39
ERVFRD-3-201ENST00000578561 XRCC6P12956 609 aaKnown RBP eCLIP6.36□□□□□ -1.39
ERVFRD-3-201ENST00000578561 GMPRP36959 345 aa6.36□□□□□ -1.39
ERVFRD-3-201ENST00000578561 AK2P54819 239 aa6.36□□□□□ -1.39
ERVFRD-3-201ENST00000578561 SKOR2Q2VWA4 1001 aaPredicted RBP6.36□□□□□ -1.39
ERVFRD-3-201ENST00000578561 PRPF40BQ6NWY9 871 aaKnown RBP6.36□□□□□ -1.39
ERVFRD-3-201ENST00000578561 KIAA1211Q6ZU35 1233 aa6.36□□□□□ -1.39
ERVFRD-3-201ENST00000578561 NOL8Q76FK4 1167 aaKnown RBP6.36□□□□□ -1.39
ERVFRD-3-201ENST00000578561 ZNF589Q86UQ0 364 aaPredicted RBP6.36□□□□□ -1.39
ERVFRD-3-201ENST00000578561 GAS2L3Q86XJ1 694 aa6.36□□□□□ -1.39
ERVFRD-3-201ENST00000578561 RDH13Q8NBN7 331 aa6.36□□□□□ -1.39
ERVFRD-3-201ENST00000578561 TEX13AQ9BXU3 409 aaPredicted RBP6.36□□□□□ -1.39
ERVFRD-3-201ENST00000578561 PUS3Q9BZE2 481 aaKnown RBP6.36□□□□□ -1.39
ERVFRD-3-201ENST00000578561 TM6SF1Q9BZW5 370 aa6.36□□□□□ -1.39
ERVFRD-3-201ENST00000578561 GPR108Q9NPR9 543 aa6.36□□□□□ -1.39
ERVFRD-3-201ENST00000578561 RBM8AQ9Y5S9 174 aaKnown RBP6.36□□□□□ -1.39
ERVFRD-3-201ENST00000578561 TAF6LQ9Y6J9 622 aa6.36□□□□□ -1.39
ERVFRD-3-201ENST00000578561 NDUFB9Q9Y6M9 179 aa6.36□□□□□ -1.39
ERVFRD-3-201ENST00000578561 COL14A1Q05707 1796 aaKnown RBP6.36□□□□□ -1.39
ERVFRD-3-201ENST00000578561 LTBP4Q8N2S1 1624 aa6.36□□□□□ -1.39
ERVFRD-3-201ENST00000578561 EYA2O00167 538 aa6.36□□□□□ -1.39
ERVFRD-3-201ENST00000578561 SLC27A2O14975 620 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms