RNA–Protein interactions for RNA: ENST00000576616.5

SLC12A4-219, Transcript of solute carrier family 12 member 4, humanhuman

TSL 2 BASIC

Gene SLC12A4, Length 3,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-219ENST00000576616 SLC4A9Q96Q91 983 aa13.17□□□□□ -0.3
SLC12A4-219ENST00000576616 ALS2Q96Q42 1657 aa13.17□□□□□ -0.3
SLC12A4-219ENST00000576616 DHX16O60231 1041 aaKnown RBP13.17□□□□□ -0.3
SLC12A4-219ENST00000576616 PFKFB2O60825 505 aa13.17□□□□□ -0.3
SLC12A4-219ENST00000576616 PDIA3P30101 505 aaKnown RBP13.17□□□□□ -0.3
SLC12A4-219ENST00000576616 STK38Q15208 465 aa13.17□□□□□ -0.3
SLC12A4-219ENST00000576616 CCDC102BQ68D86 513 aa13.17□□□□□ -0.3
SLC12A4-219ENST00000576616 TRIM5Q9C035 493 aa13.17□□□□□ -0.3
SLC12A4-219ENST00000576616 C5P01031 1676 aa13.16□□□□□ -0.3
SLC12A4-219ENST00000576616 PHRF1Q9P1Y6 1649 aaKnown RBP13.16□□□□□ -0.3
SLC12A4-219ENST00000576616 LUZP1Q86V48 1076 aa13.16□□□□□ -0.3
SLC12A4-219ENST00000576616 NSUN7Q8NE18 718 aaKnown RBP13.16□□□□□ -0.3
SLC12A4-219ENST00000576616 ZNF396Q96N95 335 aaPredicted RBP13.16□□□□□ -0.3
SLC12A4-219ENST00000576616 ZSCAN16Q9H4T2 348 aaPredicted RBP13.16□□□□□ -0.3
SLC12A4-219ENST00000576616 ZKSCAN5Q9Y2L8 839 aa13.16□□□□□ -0.3
SLC12A4-219ENST00000576616 ZNF532Q9HCE3 1301 aa13.16□□□□□ -0.3
SLC12A4-219ENST00000576616 KINO60870 393 aaKnown RBP13.16□□□□□ -0.3
SLC12A4-219ENST00000576616 NR1I2O75469 434 aa13.16□□□□□ -0.3
SLC12A4-219ENST00000576616 PDE8BO95263 885 aa13.16□□□□□ -0.3
SLC12A4-219ENST00000576616 SLC5A1P13866 664 aa13.16□□□□□ -0.3
SLC12A4-219ENST00000576616 FAM182BQ5T319 152 aa13.16□□□□□ -0.3
SLC12A4-219ENST00000576616 MAGEB6Q8N7X4 407 aa13.16□□□□□ -0.3
SLC12A4-219ENST00000576616 SCN11AQ9UI33 1791 aa13.16□□□□□ -0.3
SLC12A4-219ENST00000576616 TYRO3Q06418 890 aa13.16□□□□□ -0.3
SLC12A4-219ENST00000576616 TRIM28Q13263 835 aaKnown RBP13.16□□□□□ -0.3
SLC12A4-219ENST00000576616 ANO6Q4KMQ2 910 aa13.16□□□□□ -0.3
SLC12A4-219ENST00000576616 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.16□□□□□ -0.3
SLC12A4-219ENST00000576616 CCAR1Q8IX12 1150 aaKnown RBP13.16□□□□□ -0.3
SLC12A4-219ENST00000576616 UTP14AQ9BVJ6 771 aaKnown RBP13.16□□□□□ -0.3
SLC12A4-219ENST00000576616 NAPBQ9H115 298 aa13.16□□□□□ -0.3
SLC12A4-219ENST00000576616 NOL7Q9UMY1 257 aaKnown RBP13.16□□□□□ -0.3
SLC12A4-219ENST00000576616 BECN2A8MW95 431 aa13.15□□□□□ -0.3
SLC12A4-219ENST00000576616 GOLGA6L19H0YKK7 550 aa13.15□□□□□ -0.3
SLC12A4-219ENST00000576616 TDO2P48775 406 aa13.15□□□□□ -0.3
SLC12A4-219ENST00000576616 CPLX2Q6PUV4 134 aaKnown RBP13.15□□□□□ -0.3
SLC12A4-219ENST00000576616 MIGA1Q8NAN2 632 aa13.15□□□□□ -0.3
SLC12A4-219ENST00000576616 GJB4Q9NTQ9 266 aa13.15□□□□□ -0.3
SLC12A4-219ENST00000576616 B4E1Z4 1266 aa13.15□□□□□ -0.3
SLC12A4-219ENST00000576616 MAP3K12Q12852 859 aa13.15□□□□□ -0.3
SLC12A4-219ENST00000576616 TTF1Q15361 905 aaPredicted RBP13.15□□□□□ -0.3
SLC12A4-219ENST00000576616 ERCC4Q92889 916 aaPredicted RBP13.15□□□□□ -0.3
SLC12A4-219ENST00000576616 RIPOR2Q9Y4F9 1068 aa13.15□□□□□ -0.3
SLC12A4-219ENST00000576616 CRKLP46109 303 aaKnown RBP13.15□□□□□ -0.31
SLC12A4-219ENST00000576616 SUSD4Q5VX71 490 aa13.15□□□□□ -0.31
SLC12A4-219ENST00000576616 SMIM5Q71RC9 77 aa13.15□□□□□ -0.31
SLC12A4-219ENST00000576616 CCDC24Q8N4L8 307 aa13.15□□□□□ -0.31
SLC12A4-219ENST00000576616 CHMP4CQ96CF2 233 aa13.15□□□□□ -0.31
SLC12A4-219ENST00000576616 PIH1D3Q9NQM4 214 aaKnown RBP13.15□□□□□ -0.31
SLC12A4-219ENST00000576616 CCDC87Q9NVE4 849 aa13.15□□□□□ -0.31
SLC12A4-219ENST00000576616 CSF1RP07333 972 aa13.14□□□□□ -0.31
SLC12A4-219ENST00000576616 DNAJC25Q9H1X3 360 aa13.14□□□□□ -0.31
SLC12A4-219ENST00000576616 INCENPQ9NQS7 918 aa13.14□□□□□ -0.31
SLC12A4-219ENST00000576616 WWC3Q9ULE0 1092 aa13.14□□□□□ -0.31
SLC12A4-219ENST00000576616 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.14□□□□□ -0.31
SLC12A4-219ENST00000576616 PATL2C9JE40 543 aaKnown RBP13.14□□□□□ -0.31
SLC12A4-219ENST00000576616 ATP2B1P20020 1258 aa13.14□□□□□ -0.31
SLC12A4-219ENST00000576616 UVSSAQ2YD98 709 aa13.14□□□□□ -0.31
SLC12A4-219ENST00000576616 C17orf53Q8N3J3 647 aaPredicted RBP13.14□□□□□ -0.31
SLC12A4-219ENST00000576616 PDLIM2Q96JY6 352 aa13.14□□□□□ -0.31
SLC12A4-219ENST00000576616 USP28Q96RU2 1077 aa13.14□□□□□ -0.31
SLC12A4-219ENST00000576616 MYL10Q9BUA6 226 aa13.14□□□□□ -0.31
SLC12A4-219ENST00000576616 DDX19AQ9NUU7 478 aaKnown RBP13.14□□□□□ -0.31
SLC12A4-219ENST00000576616 RAI14Q9P0K7 980 aa13.14□□□□□ -0.31
SLC12A4-219ENST00000576616 LOC102724428A0A0B4J2F2 783 aa13.14□□□□□ -0.31
SLC12A4-219ENST00000576616 MINDY4BA8MYZ0 360 aa13.14□□□□□ -0.31
SLC12A4-219ENST00000576616 IL6STP40189 918 aaPredicted RBP13.14□□□□□ -0.31
SLC12A4-219ENST00000576616 SIK1P57059 783 aa13.14□□□□□ -0.31
SLC12A4-219ENST00000576616 PUM3Q15397 648 aaKnown RBP13.14□□□□□ -0.31
SLC12A4-219ENST00000576616 FSIP1Q8NA03 581 aa13.14□□□□□ -0.31
SLC12A4-219ENST00000576616 ARMT1Q9H993 441 aa13.14□□□□□ -0.31
SLC12A4-219ENST00000576616 PALLDQ8WX93 1383 aa13.13□□□□□ -0.31
SLC12A4-219ENST00000576616 A0A087WWV3 80 aa13.13□□□□□ -0.31
SLC12A4-219ENST00000576616 MBD4O95243 580 aa13.13□□□□□ -0.31
SLC12A4-219ENST00000576616 BCAMP50895 628 aa13.13□□□□□ -0.31
SLC12A4-219ENST00000576616 LLPHQ9BRT6 129 aaKnown RBP13.13□□□□□ -0.31
SLC12A4-219ENST00000576616 DENND2AQ9ULE3 1009 aa13.13□□□□□ -0.31
SLC12A4-219ENST00000576616 ZNF165P49910 485 aa13.13□□□□□ -0.31
SLC12A4-219ENST00000576616 ZKSCAN3Q9BRR0 538 aa13.13□□□□□ -0.31
SLC12A4-219ENST00000576616 GOLGA6L6A8MZA4 724 aa13.12□□□□□ -0.31
SLC12A4-219ENST00000576616 UQCRFS1P1P0C7P4 283 aa13.12□□□□□ -0.31
SLC12A4-219ENST00000576616 PDE6AP16499 860 aa13.12□□□□□ -0.31
SLC12A4-219ENST00000576616 RESTQ13127 1097 aa13.12□□□□□ -0.31
SLC12A4-219ENST00000576616 TRIM29Q14134 588 aa13.12□□□□□ -0.31
SLC12A4-219ENST00000576616 CCDC152Q4G0S7 254 aa13.12□□□□□ -0.31
SLC12A4-219ENST00000576616 NUP133Q8WUM0 1156 aa13.12□□□□□ -0.31
SLC12A4-219ENST00000576616 LPIN2Q92539 896 aa13.12□□□□□ -0.31
SLC12A4-219ENST00000576616 PGBD1Q96JS3 809 aa13.12□□□□□ -0.31
SLC12A4-219ENST00000576616 ALDH8A1Q9H2A2 487 aaPredicted RBP13.12□□□□□ -0.31
SLC12A4-219ENST00000576616 FAM13BQ9NYF5 915 aa13.12□□□□□ -0.31
SLC12A4-219ENST00000576616 FBXO3Q9UK99 471 aa13.12□□□□□ -0.31
SLC12A4-219ENST00000576616 IFIT3O14879 490 aaKnown RBP13.12□□□□□ -0.31
SLC12A4-219ENST00000576616 KCNQ2O43526 872 aa13.12□□□□□ -0.31
SLC12A4-219ENST00000576616 ADD1P35611 737 aaKnown RBP13.12□□□□□ -0.31
SLC12A4-219ENST00000576616 EXOSC10Q01780 885 aaKnown RBP13.12□□□□□ -0.31
SLC12A4-219ENST00000576616 CTDSPL2Q05D32 466 aa13.12□□□□□ -0.31
SLC12A4-219ENST00000576616 STRCP1A6NGW2 1772 aa13.12□□□□□ -0.31
SLC12A4-219ENST00000576616 AFDNP55196 1824 aaKnown RBP13.12□□□□□ -0.31
SLC12A4-219ENST00000576616 METAP2P50579 478 aaKnown RBP eCLIP13.12□□□□□ -0.311e-6■■■■□ 24.2
SLC12A4-219ENST00000576616 FAM98CQ17RN3 349 aaKnown RBP13.12□□□□□ -0.31
SLC12A4-219ENST00000576616 HS1BP3Q53T59 392 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms