RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 PPP1R12BO60237 982 aaPredicted RBP12.8□□□□□ -0.36
CALCOCO2-227ENST00000575560 CASP7P55210 303 aa12.8□□□□□ -0.36
CALCOCO2-227ENST00000575560 GCKRQ14397 625 aa12.8□□□□□ -0.36
CALCOCO2-227ENST00000575560 HABP4Q5JVS0 413 aaKnown RBP12.8□□□□□ -0.36
CALCOCO2-227ENST00000575560 C15orf52Q6ZUT6 534 aaKnown RBP12.8□□□□□ -0.36
CALCOCO2-227ENST00000575560 WNK4Q96J92 1243 aa12.8□□□□□ -0.36
CALCOCO2-227ENST00000575560 CLMNQ96JQ2 1002 aa12.8□□□□□ -0.36
CALCOCO2-227ENST00000575560 MPHOSPH8Q99549 860 aa12.8□□□□□ -0.36
CALCOCO2-227ENST00000575560 PTPN22Q9Y2R2 807 aa12.8□□□□□ -0.36
CALCOCO2-227ENST00000575560 SSC5DA1L4H1 1573 aa12.79□□□□□ -0.36
CALCOCO2-227ENST00000575560 TESPA1A2RU30 521 aaPredicted RBP12.79□□□□□ -0.36
CALCOCO2-227ENST00000575560 CHRNDQ07001 517 aa12.79□□□□□ -0.36
CALCOCO2-227ENST00000575560 G2E3Q7L622 706 aa12.79□□□□□ -0.36
CALCOCO2-227ENST00000575560 PCDHAC2Q9Y5I4 1007 aa12.79□□□□□ -0.36
CALCOCO2-227ENST00000575560 SPDYE2BA6NHP3 402 aa12.78□□□□□ -0.36
CALCOCO2-227ENST00000575560 SNAP23O00161 211 aa12.78□□□□□ -0.36
CALCOCO2-227ENST00000575560 USP2O75604 605 aaPredicted RBP12.78□□□□□ -0.36
CALCOCO2-227ENST00000575560 SPDYE6P0CI01 402 aa12.78□□□□□ -0.36
CALCOCO2-227ENST00000575560 IL1R1P14778 569 aa12.78□□□□□ -0.36
CALCOCO2-227ENST00000575560 GJA5P36382 358 aa12.78□□□□□ -0.36
CALCOCO2-227ENST00000575560 FKBP1AP62942 108 aaKnown RBP12.78□□□□□ -0.36
CALCOCO2-227ENST00000575560 SUPT20HL1Q3ZLR7 823 aa12.78□□□□□ -0.36
CALCOCO2-227ENST00000575560 ARMC5Q96C12 935 aa12.78□□□□□ -0.36
CALCOCO2-227ENST00000575560 ERO1AQ96HE7 468 aa12.78□□□□□ -0.36
CALCOCO2-227ENST00000575560 PRMT6Q96LA8 375 aaPredicted RBP12.78□□□□□ -0.36
CALCOCO2-227ENST00000575560 PTPN18Q99952 460 aa12.78□□□□□ -0.36
CALCOCO2-227ENST00000575560 STK31Q9BXU1 1019 aa12.78□□□□□ -0.36
CALCOCO2-227ENST00000575560 MYH3P11055 1940 aa12.78□□□□□ -0.36
CALCOCO2-227ENST00000575560 SPEF2Q9C093 1822 aa12.77□□□□□ -0.37
CALCOCO2-227ENST00000575560 SLC4A2P04920 1241 aa12.77□□□□□ -0.37
CALCOCO2-227ENST00000575560 KCNJ4P48050 445 aa12.77□□□□□ -0.37
CALCOCO2-227ENST00000575560 CAP1Q01518 475 aa12.77□□□□□ -0.37
CALCOCO2-227ENST00000575560 CRHR2Q13324 411 aa12.77□□□□□ -0.37
CALCOCO2-227ENST00000575560 CFAP100Q494V2 611 aa12.77□□□□□ -0.37
CALCOCO2-227ENST00000575560 NBPF12Q5TAG4 269 aaPredicted RBP12.77□□□□□ -0.37
CALCOCO2-227ENST00000575560 OTUD7BQ6GQQ9 843 aa12.77□□□□□ -0.37
CALCOCO2-227ENST00000575560 CD99L2Q8TCZ2 262 aa12.77□□□□□ -0.37
CALCOCO2-227ENST00000575560 TSR2Q969E8 191 aaKnown RBP12.77□□□□□ -0.37
CALCOCO2-227ENST00000575560 PRKRIP1Q9H875 184 aaPredicted RBP12.77□□□□□ -0.37
CALCOCO2-227ENST00000575560 AOX1Q06278 1338 aa12.77□□□□□ -0.37
CALCOCO2-227ENST00000575560 CLRN2A0PK11 232 aa12.76□□□□□ -0.37
CALCOCO2-227ENST00000575560 MYO1BO43795 1136 aa12.76□□□□□ -0.37
CALCOCO2-227ENST00000575560 TAF5LO75529 589 aa12.76□□□□□ -0.37
CALCOCO2-227ENST00000575560 EN2P19622 333 aaPredicted RBP12.76□□□□□ -0.37
CALCOCO2-227ENST00000575560 SP3Q02447 781 aa12.76□□□□□ -0.37
CALCOCO2-227ENST00000575560 HELBQ8NG08 1087 aaPredicted RBP12.76□□□□□ -0.37
CALCOCO2-227ENST00000575560 EFCC1Q9HA90 598 aa12.76□□□□□ -0.37
CALCOCO2-227ENST00000575560 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.76□□□□□ -0.37
CALCOCO2-227ENST00000575560 ANKRD18BA2A2Z9 1011 aa12.75□□□□□ -0.37
CALCOCO2-227ENST00000575560 F8W031 263 aaPredicted RBP12.75□□□□□ -0.37
CALCOCO2-227ENST00000575560 LAMB1P07942 1786 aa12.75□□□□□ -0.37
CALCOCO2-227ENST00000575560 IREB2P48200 963 aaKnown RBP12.75□□□□□ -0.37
CALCOCO2-227ENST00000575560 RASA3Q14644 834 aa12.75□□□□□ -0.37
CALCOCO2-227ENST00000575560 KIAA0100Q14667 2235 aaKnown RBP12.75□□□□□ -0.37
CALCOCO2-227ENST00000575560 TWISTNBQ3B726 338 aaPredicted RBP12.75□□□□□ -0.37
CALCOCO2-227ENST00000575560 ANKRD13AQ8IZ07 590 aa12.75□□□□□ -0.37
CALCOCO2-227ENST00000575560 LINS1Q8NG48 757 aa12.75□□□□□ -0.37
CALCOCO2-227ENST00000575560 MS4A4AQ96JQ5 239 aa12.75□□□□□ -0.37
CALCOCO2-227ENST00000575560 FOXO4P98177 505 aa12.74□□□□□ -0.37
CALCOCO2-227ENST00000575560 FLIIQ13045 1269 aa12.74□□□□□ -0.37
CALCOCO2-227ENST00000575560 ZNF804AQ7Z570 1209 aa12.74□□□□□ -0.37
CALCOCO2-227ENST00000575560 DNAAF4Q8WXU2 420 aa12.74□□□□□ -0.37
CALCOCO2-227ENST00000575560 MYH16Q9H6N6 1097 aa12.74□□□□□ -0.37
CALCOCO2-227ENST00000575560 VEZTQ9HBM0 779 aa12.74□□□□□ -0.37
CALCOCO2-227ENST00000575560 IFIT5Q13325 482 aaKnown RBP12.73□□□□□ -0.37
CALCOCO2-227ENST00000575560 CCDC27Q2M243 656 aa12.73□□□□□ -0.37
CALCOCO2-227ENST00000575560 OPTNQ96CV9 577 aa12.73□□□□□ -0.37
CALCOCO2-227ENST00000575560 ZNF333Q96JL9 665 aa12.73□□□□□ -0.37
CALCOCO2-227ENST00000575560 RBBP6Q7Z6E9 1792 aaKnown RBP12.72□□□□□ -0.37
CALCOCO2-227ENST00000575560 FAM205AQ6ZU69 1335 aa12.72□□□□□ -0.37
CALCOCO2-227ENST00000575560 FXR1P51114 621 aaKnown RBP eCLIP12.72□□□□□ -0.37
CALCOCO2-227ENST00000575560 SPDYE2Q495Y8 402 aa12.72□□□□□ -0.37
CALCOCO2-227ENST00000575560 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.72□□□□□ -0.37
CALCOCO2-227ENST00000575560 WWC1Q8IX03 1113 aa12.72□□□□□ -0.37
CALCOCO2-227ENST00000575560 TEPSINQ96N21 525 aa12.72□□□□□ -0.37
CALCOCO2-227ENST00000575560 ELP3Q9H9T3 547 aa12.72□□□□□ -0.37
CALCOCO2-227ENST00000575560 JAG2Q9Y219 1238 aa12.72□□□□□ -0.37
CALCOCO2-227ENST00000575560 SZT2Q5T011 3432 aa12.72□□□□□ -0.37
CALCOCO2-227ENST00000575560 RBM5P52756 815 aaKnown RBP eCLIP12.71□□□□□ -0.37
CALCOCO2-227ENST00000575560 FKBP5Q13451 457 aaPredicted RBP12.71□□□□□ -0.37
CALCOCO2-227ENST00000575560 TNFAIP1Q13829 316 aa12.71□□□□□ -0.37
CALCOCO2-227ENST00000575560 TDRD7Q8NHU6 1098 aaKnown RBP12.71□□□□□ -0.37
CALCOCO2-227ENST00000575560 BRI3BPQ8WY22 251 aa12.71□□□□□ -0.37
CALCOCO2-227ENST00000575560 TMEM106CQ9BVX2 250 aa12.71□□□□□ -0.37
CALCOCO2-227ENST00000575560 ZNF70Q9UC06 446 aaPredicted RBP12.71□□□□□ -0.37
CALCOCO2-227ENST00000575560 SERPINA10Q9UK55 444 aa12.71□□□□□ -0.37
CALCOCO2-227ENST00000575560 ECM29Q5VYK3 1845 aa12.71□□□□□ -0.38
CALCOCO2-227ENST00000575560 ARHGEF6Q15052 776 aa12.7□□□□□ -0.38
CALCOCO2-227ENST00000575560 EPHA10Q5JZY3 1008 aa12.7□□□□□ -0.38
CALCOCO2-227ENST00000575560 LMBR1LQ6UX01 489 aa12.7□□□□□ -0.38
CALCOCO2-227ENST00000575560 NBPF11Q86T75 865 aa12.7□□□□□ -0.38
CALCOCO2-227ENST00000575560 CDAN1Q8IWY9 1227 aa12.7□□□□□ -0.38
CALCOCO2-227ENST00000575560 TDRD3Q9H7E2 651 aaKnown RBP12.7□□□□□ -0.38
CALCOCO2-227ENST00000575560 ZFYVE28Q9HCC9 887 aa12.7□□□□□ -0.38
CALCOCO2-227ENST00000575560 RANBP2P49792 3224 aaKnown RBP12.69□□□□□ -0.38
CALCOCO2-227ENST00000575560 IL16Q14005 1332 aa12.69□□□□□ -0.38
CALCOCO2-227ENST00000575560 PLIN1O60240 522 aa12.69□□□□□ -0.38
CALCOCO2-227ENST00000575560 GTF2A2P52657 109 aa12.69□□□□□ -0.38
CALCOCO2-227ENST00000575560 MAP3K9P80192 1104 aa12.69□□□□□ -0.38
CALCOCO2-227ENST00000575560 VGLL4Q14135 290 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms