RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 KAZALD1Q96I82 304 aa12.12□□□□□ -0.47
NPLOC4-216ENST00000574344 PUS3Q9BZE2 481 aaKnown RBP12.12□□□□□ -0.47
NPLOC4-216ENST00000574344 MROH5Q6ZUA9 1318 aa12.11□□□□□ -0.47
NPLOC4-216ENST00000574344 IRS2Q9Y4H2 1338 aa12.11□□□□□ -0.47
NPLOC4-216ENST00000574344 CT47B1P0C2W7 299 aaPredicted RBP12.11□□□□□ -0.47
NPLOC4-216ENST00000574344 IL1R1P14778 569 aa12.11□□□□□ -0.47
NPLOC4-216ENST00000574344 UBE4AQ14139 1066 aa12.11□□□□□ -0.47
NPLOC4-216ENST00000574344 DLGAP5Q15398 846 aa12.11□□□□□ -0.47
NPLOC4-216ENST00000574344 METTL24Q5JXM2 366 aa12.11□□□□□ -0.47
NPLOC4-216ENST00000574344 PRAMEF18Q5VWM3 479 aa12.11□□□□□ -0.47
NPLOC4-216ENST00000574344 VPS37DQ86XT2 251 aa12.11□□□□□ -0.47
NPLOC4-216ENST00000574344 APOBEC3FQ8IUX4 373 aaKnown RBP12.11□□□□□ -0.47
NPLOC4-216ENST00000574344 CCDC102AQ96A19 550 aa12.11□□□□□ -0.47
NPLOC4-216ENST00000574344 ZBED9Q6R2W3 1325 aa12.11□□□□□ -0.47
NPLOC4-216ENST00000574344 CA12O43570 354 aa12.1□□□□□ -0.47
NPLOC4-216ENST00000574344 FRAT2O75474 233 aaPredicted RBP12.1□□□□□ -0.47
NPLOC4-216ENST00000574344 GYG1P46976 350 aa12.1□□□□□ -0.47
NPLOC4-216ENST00000574344 RBM5P52756 815 aaKnown RBP eCLIP12.1□□□□□ -0.47
NPLOC4-216ENST00000574344 RABL6Q3YEC7 729 aaPredicted RBP12.1□□□□□ -0.47
NPLOC4-216ENST00000574344 ANKRD44Q8N8A2 993 aa12.1□□□□□ -0.47
NPLOC4-216ENST00000574344 NOB1Q9ULX3 412 aaKnown RBP12.1□□□□□ -0.47
NPLOC4-216ENST00000574344 COL1A1P02452 1464 aaPredicted RBP12.09□□□□□ -0.47
NPLOC4-216ENST00000574344 MYO1BO43795 1136 aa12.09□□□□□ -0.47
NPLOC4-216ENST00000574344 SLC10A3P09131 477 aa12.09□□□□□ -0.47
NPLOC4-216ENST00000574344 UBTFL1P0CB47 393 aaPredicted RBP12.09□□□□□ -0.47
NPLOC4-216ENST00000574344 HIBADHP31937 336 aaKnown RBP12.09□□□□□ -0.47
NPLOC4-216ENST00000574344 FKBP1BP68106 108 aa12.09□□□□□ -0.47
NPLOC4-216ENST00000574344 LRRC24Q50LG9 513 aa12.09□□□□□ -0.47
NPLOC4-216ENST00000574344 TRMT2AQ8IZ69 625 aaKnown RBP12.09□□□□□ -0.47
NPLOC4-216ENST00000574344 CERS5Q8N5B7 392 aa12.09□□□□□ -0.47
NPLOC4-216ENST00000574344 KLHDC4Q8TBB5 520 aa12.09□□□□□ -0.47
NPLOC4-216ENST00000574344 ZIC5Q96T25 663 aa12.09□□□□□ -0.47
NPLOC4-216ENST00000574344 API5Q9BZZ5 524 aaKnown RBP12.09□□□□□ -0.47
NPLOC4-216ENST00000574344 USP44Q9H0E7 712 aa12.09□□□□□ -0.47
NPLOC4-216ENST00000574344 KIF16BQ96L93 1317 aa12.09□□□□□ -0.47
NPLOC4-216ENST00000574344 AK9Q5TCS8 1911 aa12.08□□□□□ -0.48
NPLOC4-216ENST00000574344 FKBP1AP62942 108 aaKnown RBP12.08□□□□□ -0.48
NPLOC4-216ENST00000574344 KIF23Q02241 960 aaPredicted RBP12.08□□□□□ -0.48
NPLOC4-216ENST00000574344 CHAF1AQ13111 956 aaPredicted RBP12.08□□□□□ -0.48
NPLOC4-216ENST00000574344 PRKG1Q13976 671 aa12.08□□□□□ -0.48
NPLOC4-216ENST00000574344 CFAP100Q494V2 611 aa12.08□□□□□ -0.48
NPLOC4-216ENST00000574344 CAVIN4Q5BKX8 364 aa12.08□□□□□ -0.48
NPLOC4-216ENST00000574344 MFSD14BQ5SR56 506 aa12.08□□□□□ -0.48
NPLOC4-216ENST00000574344 MOB2Q70IA6 237 aa12.08□□□□□ -0.48
NPLOC4-216ENST00000574344 VEZTQ9HBM0 779 aa12.08□□□□□ -0.48
NPLOC4-216ENST00000574344 IQSEC3Q9UPP2 1182 aaPredicted RBP12.08□□□□□ -0.48
NPLOC4-216ENST00000574344 RIPOR2Q9Y4F9 1068 aa12.08□□□□□ -0.48
NPLOC4-216ENST00000574344 OTOFQ9HC10 1997 aa12.07□□□□□ -0.48
NPLOC4-216ENST00000574344 CLRN2A0PK11 232 aa12.07□□□□□ -0.48
NPLOC4-216ENST00000574344 FAM155AB1AL88 458 aaPredicted RBP12.07□□□□□ -0.48
NPLOC4-216ENST00000574344 UBE2Q2LH0YL09 131 aa12.07□□□□□ -0.48
NPLOC4-216ENST00000574344 RASAL3Q86YV0 1011 aa12.07□□□□□ -0.48
NPLOC4-216ENST00000574344 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.07□□□□□ -0.48
NPLOC4-216ENST00000574344 TTF2Q9UNY4 1162 aaKnown RBP12.07□□□□□ -0.48
NPLOC4-216ENST00000574344 FAM205AQ6ZU69 1335 aa12.07□□□□□ -0.48
NPLOC4-216ENST00000574344 PDE8BO95263 885 aa12.06□□□□□ -0.48
NPLOC4-216ENST00000574344 IFIT1P09914 478 aaKnown RBP12.06□□□□□ -0.48
NPLOC4-216ENST00000574344 RARSP54136 660 aaKnown RBP12.06□□□□□ -0.48
NPLOC4-216ENST00000574344 PUM3Q15397 648 aaKnown RBP12.06□□□□□ -0.48
NPLOC4-216ENST00000574344 ARMC9Q7Z3E5 817 aa12.06□□□□□ -0.48
NPLOC4-216ENST00000574344 TDRD7Q8NHU6 1098 aaKnown RBP12.06□□□□□ -0.48
NPLOC4-216ENST00000574344 ZBED3Q96IU2 234 aaPredicted RBP12.06□□□□□ -0.48
NPLOC4-216ENST00000574344 FAM84BQ96KN1 310 aaPredicted RBP12.06□□□□□ -0.48
NPLOC4-216ENST00000574344 SIL1Q9H173 461 aa12.06□□□□□ -0.48
NPLOC4-216ENST00000574344 HDAC5Q9UQL6 1122 aa12.06□□□□□ -0.48
NPLOC4-216ENST00000574344 PCDHAC2Q9Y5I4 1007 aa12.06□□□□□ -0.48
NPLOC4-216ENST00000574344 SPDYE2BA6NHP3 402 aa12.05□□□□□ -0.48
NPLOC4-216ENST00000574344 SPDYE6P0CI01 402 aa12.05□□□□□ -0.48
NPLOC4-216ENST00000574344 SLC5A1P13866 664 aa12.05□□□□□ -0.48
NPLOC4-216ENST00000574344 VGLL2Q8N8G2 317 aa12.05□□□□□ -0.48
NPLOC4-216ENST00000574344 MTMR14Q8NCE2 650 aa12.05□□□□□ -0.48
NPLOC4-216ENST00000574344 DEFB129Q9H1M3 183 aa12.05□□□□□ -0.48
NPLOC4-216ENST00000574344 ANGEL1Q9UNK9 670 aaKnown RBP12.05□□□□□ -0.48
NPLOC4-216ENST00000574344 LRRFIP2Q9Y608 721 aaKnown RBP12.05□□□□□ -0.48
NPLOC4-216ENST00000574344 EYA2O00167 538 aa12.04□□□□□ -0.48
NPLOC4-216ENST00000574344 TRPA1O75762 1119 aa12.04□□□□□ -0.48
NPLOC4-216ENST00000574344 MKRN3Q13064 507 aaKnown RBP12.04□□□□□ -0.48
NPLOC4-216ENST00000574344 TNFAIP1Q13829 316 aa12.04□□□□□ -0.48
NPLOC4-216ENST00000574344 TBC1D22AQ8WUA7 517 aa12.04□□□□□ -0.48
NPLOC4-216ENST00000574344 FRAT1Q92837 279 aaPredicted RBP12.04□□□□□ -0.48
NPLOC4-216ENST00000574344 PRMT6Q96LA8 375 aaPredicted RBP12.04□□□□□ -0.48
NPLOC4-216ENST00000574344 SAGE1Q9NXZ1 904 aa12.04□□□□□ -0.48
NPLOC4-216ENST00000574344 PPP2R3BQ9Y5P8 575 aa12.04□□□□□ -0.48
NPLOC4-216ENST00000574344 LAMB1P07942 1786 aa12.04□□□□□ -0.48
NPLOC4-216ENST00000574344 MYH2Q9UKX2 1941 aa12.03□□□□□ -0.48
NPLOC4-216ENST00000574344 PPP1R12BO60237 982 aaPredicted RBP12.03□□□□□ -0.48
NPLOC4-216ENST00000574344 RFX5P48382 616 aaPredicted RBP12.03□□□□□ -0.48
NPLOC4-216ENST00000574344 BCAMP50895 628 aa12.03□□□□□ -0.48
NPLOC4-216ENST00000574344 PTPN12Q05209 780 aaKnown RBP12.03□□□□□ -0.48
NPLOC4-216ENST00000574344 FBXO33Q7Z6M2 555 aa12.03□□□□□ -0.48
NPLOC4-216ENST00000574344 REM2Q8IYK8 340 aaPredicted RBP12.03□□□□□ -0.48
NPLOC4-216ENST00000574344 ABHD8Q96I13 439 aa12.03□□□□□ -0.48
NPLOC4-216ENST00000574344 CSRNP1Q96S65 589 aa12.03□□□□□ -0.48
NPLOC4-216ENST00000574344 MEIS3Q99687 375 aa12.03□□□□□ -0.48
NPLOC4-216ENST00000574344 SERPINA10Q9UK55 444 aa12.03□□□□□ -0.48
NPLOC4-216ENST00000574344 FZD1Q9UP38 647 aa12.03□□□□□ -0.48
NPLOC4-216ENST00000574344 SSC5DA1L4H1 1573 aa12.02□□□□□ -0.49
NPLOC4-216ENST00000574344 IPO8O15397 1037 aaKnown RBP12.02□□□□□ -0.49
NPLOC4-216ENST00000574344 GNAI3P08754 354 aa12.02□□□□□ -0.49
NPLOC4-216ENST00000574344 CRKP46108 304 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms