RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 BRCA2P51587 3418 aa11.18□□□□□ -0.62
SMG1-216ENST00000569122 A0A0C4DFX4 3053 aa11.17□□□□□ -0.62
SMG1-216ENST00000569122 CCL15-CCL14A0A0B4J2E2 113 aa11.17□□□□□ -0.62
SMG1-216ENST00000569122 SPDYE2BA6NHP3 402 aa11.17□□□□□ -0.62
SMG1-216ENST00000569122 TLR2O60603 784 aa11.17□□□□□ -0.62
SMG1-216ENST00000569122 SPDYE6P0CI01 402 aa11.17□□□□□ -0.62
SMG1-216ENST00000569122 GJA5P36382 358 aa11.17□□□□□ -0.62
SMG1-216ENST00000569122 NEXNQ0ZGT2 675 aa11.17□□□□□ -0.62
SMG1-216ENST00000569122 CCL15Q16663 113 aa11.17□□□□□ -0.62
SMG1-216ENST00000569122 KRT24Q2M2I5 525 aa11.17□□□□□ -0.62
SMG1-216ENST00000569122 CFAP100Q494V2 611 aa11.17□□□□□ -0.62
SMG1-216ENST00000569122 NBPF12Q5TAG4 269 aaPredicted RBP11.17□□□□□ -0.62
SMG1-216ENST00000569122 TTLL11Q8NHH1 800 aa11.17□□□□□ -0.62
SMG1-216ENST00000569122 METTL22Q9BUU2 404 aaPredicted RBP11.17□□□□□ -0.62
SMG1-216ENST00000569122 FZD1Q9UP38 647 aa11.17□□□□□ -0.62
SMG1-216ENST00000569122 CSADQ9Y600 493 aa11.17□□□□□ -0.62
SMG1-216ENST00000569122 SCN9AQ15858 1988 aa11.17□□□□□ -0.62
SMG1-216ENST00000569122 TRIOBPQ9H2D6 2365 aa11.16□□□□□ -0.62
SMG1-216ENST00000569122 SZT2Q5T011 3432 aa11.16□□□□□ -0.62
SMG1-216ENST00000569122 WTIPA6NIX2 430 aaPredicted RBP11.16□□□□□ -0.62
SMG1-216ENST00000569122 MYCP01106 439 aaPredicted RBP11.16□□□□□ -0.62
SMG1-216ENST00000569122 CETPP11597 493 aa11.16□□□□□ -0.62
SMG1-216ENST00000569122 UBXN2AP68543 259 aa11.16□□□□□ -0.62
SMG1-216ENST00000569122 MAP3K9P80192 1104 aa11.16□□□□□ -0.62
SMG1-216ENST00000569122 LACTBP83111 547 aaPredicted RBP11.16□□□□□ -0.62
SMG1-216ENST00000569122 RASA3Q14644 834 aa11.16□□□□□ -0.62
SMG1-216ENST00000569122 NEUROD2Q15784 382 aa11.16□□□□□ -0.62
SMG1-216ENST00000569122 GPR153Q6NV75 609 aa11.16□□□□□ -0.62
SMG1-216ENST00000569122 SH3TC2Q8TF17 1288 aa11.16□□□□□ -0.62
SMG1-216ENST00000569122 BRI3BPQ8WY22 251 aa11.16□□□□□ -0.62
SMG1-216ENST00000569122 ELP3Q9H9T3 547 aa11.16□□□□□ -0.62
SMG1-216ENST00000569122 CD209Q9NNX6 404 aa11.16□□□□□ -0.62
SMG1-216ENST00000569122 CLRN2A0PK11 232 aa11.15□□□□□ -0.62
SMG1-216ENST00000569122 GJB1P08034 283 aa11.15□□□□□ -0.62
SMG1-216ENST00000569122 GJA8P48165 433 aa11.15□□□□□ -0.62
SMG1-216ENST00000569122 TNNI2P48788 182 aa11.15□□□□□ -0.62
SMG1-216ENST00000569122 RBM5P52756 815 aaKnown RBP eCLIP11.15□□□□□ -0.62
SMG1-216ENST00000569122 TXNRD3Q86VQ6 643 aa11.15□□□□□ -0.62
SMG1-216ENST00000569122 RAET1EQ8TD07 263 aa11.15□□□□□ -0.62
SMG1-216ENST00000569122 HOOK2Q96ED9 719 aa11.15□□□□□ -0.62
SMG1-216ENST00000569122 TRIM47Q96LD4 638 aa11.15□□□□□ -0.62
SMG1-216ENST00000569122 PRO3102Q9H379 93 aa11.15□□□□□ -0.62
SMG1-216ENST00000569122 GREM2Q9H772 168 aa11.15□□□□□ -0.62
SMG1-216ENST00000569122 RBBP6Q7Z6E9 1792 aaKnown RBP11.14□□□□□ -0.63
SMG1-216ENST00000569122 CALD1Q05682 793 aaKnown RBP11.14□□□□□ -0.63
SMG1-216ENST00000569122 C15orf52Q6ZUT6 534 aaKnown RBP11.14□□□□□ -0.63
SMG1-216ENST00000569122 ZNF804AQ7Z570 1209 aa11.14□□□□□ -0.63
SMG1-216ENST00000569122 PRMT6Q96LA8 375 aaPredicted RBP11.14□□□□□ -0.63
SMG1-216ENST00000569122 TAF1P21675 1872 aa11.14□□□□□ -0.63
SMG1-216ENST00000569122 ZBTB7BO15156 539 aaPredicted RBP11.13□□□□□ -0.63
SMG1-216ENST00000569122 GRK4P32298 578 aa11.13□□□□□ -0.63
SMG1-216ENST00000569122 CAP1Q01518 475 aa11.13□□□□□ -0.63
SMG1-216ENST00000569122 SNAPC2Q13487 334 aa11.13□□□□□ -0.63
SMG1-216ENST00000569122 CCDC30Q5VVM6 783 aa11.13□□□□□ -0.63
SMG1-216ENST00000569122 JARID2Q92833 1246 aaPredicted RBP11.13□□□□□ -0.63
SMG1-216ENST00000569122 PHAXQ9H814 394 aaKnown RBP11.13□□□□□ -0.63
SMG1-216ENST00000569122 BIN2Q9UBW5 565 aaPredicted RBP11.13□□□□□ -0.63
SMG1-216ENST00000569122 SRRDQ9UH36 339 aa11.13□□□□□ -0.63
SMG1-216ENST00000569122 SERPINA10Q9UK55 444 aa11.13□□□□□ -0.63
SMG1-216ENST00000569122 SPDYE5A6NIY4 337 aa11.12□□□□□ -0.63
SMG1-216ENST00000569122 F8W031 263 aaPredicted RBP11.12□□□□□ -0.63
SMG1-216ENST00000569122 EVI5O60447 810 aa11.12□□□□□ -0.63
SMG1-216ENST00000569122 FMNL1O95466 1100 aaPredicted RBP11.12□□□□□ -0.63
SMG1-216ENST00000569122 IL1R1P14778 569 aa11.12□□□□□ -0.63
SMG1-216ENST00000569122 ITGA6P23229 1130 aa11.12□□□□□ -0.63
SMG1-216ENST00000569122 VGLL4Q14135 290 aa11.12□□□□□ -0.63
SMG1-216ENST00000569122 KSR2Q6VAB6 950 aa11.12□□□□□ -0.63
SMG1-216ENST00000569122 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.12□□□□□ -0.63
SMG1-216ENST00000569122 UBE2Q1Q7Z7E8 422 aa11.12□□□□□ -0.63
SMG1-216ENST00000569122 ERO1BQ86YB8 467 aa11.12□□□□□ -0.63
SMG1-216ENST00000569122 FAM43AQ8N2R8 423 aa11.12□□□□□ -0.63
SMG1-216ENST00000569122 RUNDC1Q96C34 613 aa11.12□□□□□ -0.63
SMG1-216ENST00000569122 RNF208Q9H0X6 261 aa11.12□□□□□ -0.63
SMG1-216ENST00000569122 RIPOR2Q9Y4F9 1068 aa11.12□□□□□ -0.63
SMG1-216ENST00000569122 RANBP2P49792 3224 aaKnown RBP11.12□□□□□ -0.63
SMG1-216ENST00000569122 CEP290O15078 2479 aa11.12□□□□□ -0.63
SMG1-216ENST00000569122 SSC5DA1L4H1 1573 aa11.11□□□□□ -0.63
SMG1-216ENST00000569122 COL4A1P02462 1669 aa11.11□□□□□ -0.63
SMG1-216ENST00000569122 FARP2O94887 1054 aaPredicted RBP11.11□□□□□ -0.63
SMG1-216ENST00000569122 CCL5P13501 91 aa11.11□□□□□ -0.63
SMG1-216ENST00000569122 PSMC4P43686 418 aa11.11□□□□□ -0.63
SMG1-216ENST00000569122 CHRNDQ07001 517 aa11.11□□□□□ -0.63
SMG1-216ENST00000569122 MTFR1Q15390 333 aa11.11□□□□□ -0.63
SMG1-216ENST00000569122 SPDYE2Q495Y8 402 aa11.11□□□□□ -0.63
SMG1-216ENST00000569122 CERS5Q8N5B7 392 aa11.11□□□□□ -0.63
SMG1-216ENST00000569122 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.11□□□□□ -0.63
SMG1-216ENST00000569122 SHISA4Q96DD7 197 aa11.11□□□□□ -0.63
SMG1-216ENST00000569122 PLA2G12BQ9BX93 195 aa11.11□□□□□ -0.63
SMG1-216ENST00000569122 ZNF70Q9UC06 446 aaPredicted RBP11.11□□□□□ -0.63
SMG1-216ENST00000569122 TRIM35Q9UPQ4 493 aa11.11□□□□□ -0.63
SMG1-216ENST00000569122 MAP3K2Q9Y2U5 619 aa11.11□□□□□ -0.63
SMG1-216ENST00000569122 ANKRD18BA2A2Z9 1011 aa11.1□□□□□ -0.63
SMG1-216ENST00000569122 BTBD19C9JJ37 291 aa11.1□□□□□ -0.63
SMG1-216ENST00000569122 H7C1W4 665 aa11.1□□□□□ -0.63
SMG1-216ENST00000569122 GNAI1P63096 354 aa11.1□□□□□ -0.63
SMG1-216ENST00000569122 RALBP1Q15311 655 aa11.1□□□□□ -0.63
SMG1-216ENST00000569122 C17orf99Q6UX52 265 aa11.1□□□□□ -0.63
SMG1-216ENST00000569122 SLAIN1Q8ND83 568 aa11.1□□□□□ -0.63
SMG1-216ENST00000569122 ARHGAP39Q9C0H5 1083 aa11.1□□□□□ -0.63
SMG1-216ENST00000569122 MBIPQ9NS73 344 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms