RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 CCNYL3P0C7X3 344 aa8.22□□□□□ -1.09
UBFD1-204ENST00000565634 MS4A1P11836 297 aa8.22□□□□□ -1.09
UBFD1-204ENST00000565634 FXR1P51114 621 aaKnown RBP eCLIP8.22□□□□□ -1.09
UBFD1-204ENST00000565634 PRR5LQ6MZQ0 368 aa8.22□□□□□ -1.09
UBFD1-204ENST00000565634 SAPCD2Q86UD0 394 aa8.22□□□□□ -1.09
UBFD1-204ENST00000565634 PNMA8AQ86V59 439 aaPredicted RBP8.22□□□□□ -1.09
UBFD1-204ENST00000565634 EHBP1Q8NDI1 1231 aa8.22□□□□□ -1.09
UBFD1-204ENST00000565634 GLIS2Q9BZE0 524 aaPredicted RBP8.22□□□□□ -1.09
UBFD1-204ENST00000565634 SENP2Q9HC62 589 aa8.22□□□□□ -1.09
UBFD1-204ENST00000565634 TBC1D2BQ9UPU7 963 aa8.22□□□□□ -1.09
UBFD1-204ENST00000565634 SOS1Q07889 1333 aaPredicted RBP8.22□□□□□ -1.09
UBFD1-204ENST00000565634 SCN11AQ9UI33 1791 aa8.22□□□□□ -1.09
UBFD1-204ENST00000565634 RTL1A6NKG5 1358 aa8.22□□□□□ -1.09
UBFD1-204ENST00000565634 TRIOBPQ9H2D6 2365 aa8.21□□□□□ -1.09
UBFD1-204ENST00000565634 PDE6BP35913 854 aa8.21□□□□□ -1.1
UBFD1-204ENST00000565634 AMHR2Q16671 573 aa8.21□□□□□ -1.1
UBFD1-204ENST00000565634 ZNF530Q6P9A1 599 aaPredicted RBP8.21□□□□□ -1.1
UBFD1-204ENST00000565634 EVA1BQ9NVM1 165 aa8.21□□□□□ -1.1
UBFD1-204ENST00000565634 FLT4P35916 1363 aa8.21□□□□□ -1.1
UBFD1-204ENST00000565634 FAM177BA6PVY3 158 aa8.2□□□□□ -1.1
UBFD1-204ENST00000565634 TERTO14746 1132 aaKnown RBP8.2□□□□□ -1.1
UBFD1-204ENST00000565634 NPHP1O15259 732 aa8.2□□□□□ -1.1
UBFD1-204ENST00000565634 CYP19A1P11511 503 aaPredicted RBP8.2□□□□□ -1.1
UBFD1-204ENST00000565634 TTLL12Q14166 644 aaPredicted RBP8.2□□□□□ -1.1
UBFD1-204ENST00000565634 EIF4A2Q14240 407 aaKnown RBP8.2□□□□□ -1.1
UBFD1-204ENST00000565634 SLC17A8Q8NDX2 589 aa8.2□□□□□ -1.1
UBFD1-204ENST00000565634 PRR7Q8TB68 274 aa8.2□□□□□ -1.1
UBFD1-204ENST00000565634 CNKSR1Q969H4 720 aa8.2□□□□□ -1.1
UBFD1-204ENST00000565634 BRIP1Q9BX63 1249 aa8.2□□□□□ -1.1
UBFD1-204ENST00000565634 LTBP3Q9NS15 1303 aa8.2□□□□□ -1.1
UBFD1-204ENST00000565634 FZD9O00144 591 aa8.19□□□□□ -1.1
UBFD1-204ENST00000565634 TCERG1O14776 1098 aaKnown RBP8.19□□□□□ -1.1
UBFD1-204ENST00000565634 ANP32CO43423 234 aa8.19□□□□□ -1.1
UBFD1-204ENST00000565634 WIPF1O43516 503 aa8.19□□□□□ -1.1
UBFD1-204ENST00000565634 SRGNP10124 158 aa8.19□□□□□ -1.1
UBFD1-204ENST00000565634 IL13P35225 146 aa8.19□□□□□ -1.1
UBFD1-204ENST00000565634 KIF23Q02241 960 aaPredicted RBP8.19□□□□□ -1.1
UBFD1-204ENST00000565634 RALBP1Q15311 655 aa8.19□□□□□ -1.1
UBFD1-204ENST00000565634 PTPRNQ16849 979 aa8.19□□□□□ -1.1
UBFD1-204ENST00000565634 GIGYF2Q6Y7W6 1299 aaKnown RBP8.19□□□□□ -1.1
UBFD1-204ENST00000565634 PARP9Q8IXQ6 854 aa8.19□□□□□ -1.1
UBFD1-204ENST00000565634 NBPF15Q8N660 670 aa8.19□□□□□ -1.1
UBFD1-204ENST00000565634 C7orf43Q8WVR3 580 aa8.19□□□□□ -1.1
UBFD1-204ENST00000565634 BAP1Q92560 729 aa8.19□□□□□ -1.1
UBFD1-204ENST00000565634 UNC93B1Q9H1C4 597 aa8.19□□□□□ -1.1
UBFD1-204ENST00000565634 LGR6Q9HBX8 967 aa8.19□□□□□ -1.1
UBFD1-204ENST00000565634 RNF186Q9NXI6 227 aa8.19□□□□□ -1.1
UBFD1-204ENST00000565634 COL15A1P39059 1388 aa8.19□□□□□ -1.1
UBFD1-204ENST00000565634 COL4A5P29400 1685 aa8.18□□□□□ -1.1
UBFD1-204ENST00000565634 CEP290O15078 2479 aa8.18□□□□□ -1.1
UBFD1-204ENST00000565634 CA12O43570 354 aa8.18□□□□□ -1.1
UBFD1-204ENST00000565634 LMOD1P29536 600 aaPredicted RBP8.18□□□□□ -1.1
UBFD1-204ENST00000565634 IARSP41252 1262 aaKnown RBP8.18□□□□□ -1.1
UBFD1-204ENST00000565634 SCNN1DP51172 638 aa8.18□□□□□ -1.1
UBFD1-204ENST00000565634 FKBP4Q02790 459 aaKnown RBP eCLIP8.18□□□□□ -1.1
UBFD1-204ENST00000565634 KCNH2Q12809 1159 aa8.18□□□□□ -1.1
UBFD1-204ENST00000565634 LINC01559Q495D7 138 aa8.18□□□□□ -1.1
UBFD1-204ENST00000565634 TRIM46Q7Z4K8 759 aa8.18□□□□□ -1.1
UBFD1-204ENST00000565634 AEBP1Q8IUX7 1158 aa8.18□□□□□ -1.1
UBFD1-204ENST00000565634 KIFC2Q96AC6 838 aa8.18□□□□□ -1.1
UBFD1-204ENST00000565634 GCC1Q96CN9 775 aa8.18□□□□□ -1.1
UBFD1-204ENST00000565634 MASTLQ96GX5 879 aa8.18□□□□□ -1.1
UBFD1-204ENST00000565634 MKI67P46013 3256 aaKnown RBP8.18□□□□□ -1.1
UBFD1-204ENST00000565634 ARFGEF2Q9Y6D5 1785 aa8.17□□□□□ -1.1
UBFD1-204ENST00000565634 SHTN1A0MZ66 631 aa8.17□□□□□ -1.1
UBFD1-204ENST00000565634 PIP4K2AP48426 406 aaPredicted RBP8.17□□□□□ -1.1
UBFD1-204ENST00000565634 PLEKHO1Q53GL0 409 aaPredicted RBP8.17□□□□□ -1.1
UBFD1-204ENST00000565634 CCDC93Q567U6 631 aa8.17□□□□□ -1.1
UBFD1-204ENST00000565634 STYK1Q6J9G0 422 aa8.17□□□□□ -1.1
UBFD1-204ENST00000565634 GPC2Q8N158 579 aa8.17□□□□□ -1.1
UBFD1-204ENST00000565634 PCDHB15Q9Y5E8 787 aa8.17□□□□□ -1.1
UBFD1-204ENST00000565634 MYBBP1AQ9BQG0 1328 aaKnown RBP8.17□□□□□ -1.1
UBFD1-204ENST00000565634 CAPN5O15484 640 aaPredicted RBP8.16□□□□□ -1.1
UBFD1-204ENST00000565634 COL3A1P02461 1466 aaPredicted RBP8.16□□□□□ -1.1
UBFD1-204ENST00000565634 HMOX1P09601 288 aa8.16□□□□□ -1.1
UBFD1-204ENST00000565634 BMP1P13497 986 aa8.16□□□□□ -1.1
UBFD1-204ENST00000565634 EIF6P56537 245 aaKnown RBP8.16□□□□□ -1.1
UBFD1-204ENST00000565634 HUNKP57058 714 aa8.16□□□□□ -1.1
UBFD1-204ENST00000565634 MTMR2Q13614 643 aa8.16□□□□□ -1.1
UBFD1-204ENST00000565634 DESI1Q6ICB0 168 aa8.16□□□□□ -1.1
UBFD1-204ENST00000565634 CTU1Q7Z7A3 348 aaKnown RBP8.16□□□□□ -1.1
UBFD1-204ENST00000565634 USP48Q86UV5 1035 aa8.16□□□□□ -1.1
UBFD1-204ENST00000565634 PNISRQ8TF01 805 aaKnown RBP8.16□□□□□ -1.1
UBFD1-204ENST00000565634 TBC1D2Q9BYX2 928 aa8.16□□□□□ -1.1
UBFD1-204ENST00000565634 ADAMTS8Q9UP79 889 aa8.16□□□□□ -1.1
UBFD1-204ENST00000565634 WASF2Q9Y6W5 498 aa8.16□□□□□ -1.1
UBFD1-204ENST00000565634 SZT2Q5T011 3432 aa8.15□□□□□ -1.1
UBFD1-204ENST00000565634 APBB1O00213 710 aa8.15□□□□□ -1.1
UBFD1-204ENST00000565634 TBC1D8O95759 1140 aa8.15□□□□□ -1.1
UBFD1-204ENST00000565634 HIRAP54198 1017 aaPredicted RBP8.15□□□□□ -1.1
UBFD1-204ENST00000565634 CNBD1Q8NA66 436 aa8.15□□□□□ -1.1
UBFD1-204ENST00000565634 JDP2Q8WYK2 163 aa8.15□□□□□ -1.1
UBFD1-204ENST00000565634 PHACTR3Q96KR7 559 aa8.15□□□□□ -1.1
UBFD1-204ENST00000565634 SETDB2Q96T68 719 aa8.15□□□□□ -1.1
UBFD1-204ENST00000565634 NCAPD2Q15021 1401 aa8.14□□□□□ -1.11
UBFD1-204ENST00000565634 SPDYE5A6NIY4 337 aa8.14□□□□□ -1.11
UBFD1-204ENST00000565634 FAM155AB1AL88 458 aaPredicted RBP8.14□□□□□ -1.11
UBFD1-204ENST00000565634 U2SURPO15042 1029 aaKnown RBP8.14□□□□□ -1.11
UBFD1-204ENST00000565634 DIAPH1O60610 1272 aaKnown RBP8.14□□□□□ -1.11
UBFD1-204ENST00000565634 A1BGP04217 495 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms