RNA–Protein interactions for RNA: ENST00000565296.5

CCNDBP1-206, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-206ENST00000565296 SCNN1DP51172 638 aa17.04■□□□□ 0.32
CCNDBP1-206ENST00000565296 CERS5Q8N5B7 392 aa17.04■□□□□ 0.32
CCNDBP1-206ENST00000565296 L3MBTL3Q96JM7 780 aaPredicted RBP17.04■□□□□ 0.32
CCNDBP1-206ENST00000565296 GMLQ99445 158 aa17.04■□□□□ 0.32
CCNDBP1-206ENST00000565296 ZBTB22O15209 634 aa17.03■□□□□ 0.32
CCNDBP1-206ENST00000565296 GMPSP49915 693 aaPredicted RBP17.03■□□□□ 0.32
CCNDBP1-206ENST00000565296 RASGRF1Q13972 1273 aa17.03■□□□□ 0.32
CCNDBP1-206ENST00000565296 SCARF1Q14162 830 aa17.03■□□□□ 0.32
CCNDBP1-206ENST00000565296 RSBN1LQ6PCB5 846 aaPredicted RBP17.03■□□□□ 0.32
CCNDBP1-206ENST00000565296 KDM2BQ8NHM5 1336 aa17.03■□□□□ 0.32
CCNDBP1-206ENST00000565296 GORABQ5T7V8 394 aa17.03■□□□□ 0.32
CCNDBP1-206ENST00000565296 ZNF784Q8NCA9 323 aaPredicted RBP17.03■□□□□ 0.32
CCNDBP1-206ENST00000565296 FBXW7Q969H0 707 aa17.03■□□□□ 0.32
CCNDBP1-206ENST00000565296 ZNF646O15015 1829 aaPredicted RBP17.02■□□□□ 0.32
CCNDBP1-206ENST00000565296 SHTN1A0MZ66 631 aa17.02■□□□□ 0.31
CCNDBP1-206ENST00000565296 IFIT2P09913 472 aaKnown RBP17.02■□□□□ 0.31
CCNDBP1-206ENST00000565296 ARID4AP29374 1257 aaPredicted RBP17.02■□□□□ 0.31
CCNDBP1-206ENST00000565296 ANKRD45Q5TZF3 282 aa17.02■□□□□ 0.31
CCNDBP1-206ENST00000565296 C16orf71Q8IYS4 520 aaPredicted RBP17.02■□□□□ 0.31
CCNDBP1-206ENST00000565296 NMRK2Q9NPI5 230 aa17.02■□□□□ 0.31
CCNDBP1-206ENST00000565296 GNL3LQ9NVN8 582 aaKnown RBP17.02■□□□□ 0.31
CCNDBP1-206ENST00000565296 FRAT2O75474 233 aaPredicted RBP17.01■□□□□ 0.31
CCNDBP1-206ENST00000565296 CHAF1AQ13111 956 aaPredicted RBP17.01■□□□□ 0.31
CCNDBP1-206ENST00000565296 PI16Q6UXB8 463 aa17.01■□□□□ 0.31
CCNDBP1-206ENST00000565296 SEMA3EO15041 775 aa17■□□□□ 0.31
CCNDBP1-206ENST00000565296 MCAMP43121 646 aa17■□□□□ 0.31
CCNDBP1-206ENST00000565296 GRIK5Q16478 980 aa17■□□□□ 0.31
CCNDBP1-206ENST00000565296 OTUD7AQ8TE49 926 aaPredicted RBP17■□□□□ 0.31
CCNDBP1-206ENST00000565296 ZNF512BQ96KM6 892 aaPredicted RBP17■□□□□ 0.31
CCNDBP1-206ENST00000565296 GPRC5DQ9NZD1 345 aa17■□□□□ 0.31
CCNDBP1-206ENST00000565296 HMG20BQ9P0W2 317 aa17■□□□□ 0.31
CCNDBP1-206ENST00000565296 RPS12P25398 132 aaKnown RBP17■□□□□ 0.31
CCNDBP1-206ENST00000565296 EPS15P42566 896 aa17■□□□□ 0.31
CCNDBP1-206ENST00000565296 CCDC158Q5M9N0 1113 aa17■□□□□ 0.31
CCNDBP1-206ENST00000565296 MFSD14BQ5SR56 506 aa17■□□□□ 0.31
CCNDBP1-206ENST00000565296 AGBL3Q8NEM8 1001 aa17■□□□□ 0.31
CCNDBP1-206ENST00000565296 DPF2Q92785 391 aa17■□□□□ 0.31
CCNDBP1-206ENST00000565296 RRAGCQ9HB90 399 aa17■□□□□ 0.31
CCNDBP1-206ENST00000565296 DENND2AQ9ULE3 1009 aa17■□□□□ 0.31
CCNDBP1-206ENST00000565296 WDR90Q96KV7 1748 aa16.99■□□□□ 0.31
CCNDBP1-206ENST00000565296 FKBP1AP62942 108 aaKnown RBP16.99■□□□□ 0.31
CCNDBP1-206ENST00000565296 NUCB1Q02818 461 aa16.99■□□□□ 0.31
CCNDBP1-206ENST00000565296 TTC39AQ5SRH9 613 aa16.99■□□□□ 0.31
CCNDBP1-206ENST00000565296 PSME4Q14997 1843 aa16.99■□□□□ 0.31
CCNDBP1-206ENST00000565296 UQCRFS1P1P0C7P4 283 aa16.98■□□□□ 0.31
CCNDBP1-206ENST00000565296 ANP32AP39687 249 aaKnown RBP16.98■□□□□ 0.31
CCNDBP1-206ENST00000565296 MICALL2Q8IY33 904 aa16.98■□□□□ 0.31
CCNDBP1-206ENST00000565296 SPATA5Q8NB90 893 aa16.98■□□□□ 0.31
CCNDBP1-206ENST00000565296 GPBP1L1Q9HC44 474 aaPredicted RBP16.98■□□□□ 0.31
CCNDBP1-206ENST00000565296 CNOT7Q9UIV1 285 aaKnown RBP16.98■□□□□ 0.31
CCNDBP1-206ENST00000565296 PDS5AQ29RF7 1337 aaKnown RBP16.98■□□□□ 0.31
CCNDBP1-206ENST00000565296 EGFRP00533 1210 aa16.98■□□□□ 0.31
CCNDBP1-206ENST00000565296 KIAA0825Q8IV33 1275 aa16.98■□□□□ 0.31
CCNDBP1-206ENST00000565296 LNPKQ9C0E8 428 aa16.98■□□□□ 0.31
CCNDBP1-206ENST00000565296 SNRKQ9NRH2 765 aa16.98■□□□□ 0.31
CCNDBP1-206ENST00000565296 MYO3BQ8WXR4 1341 aa16.97■□□□□ 0.31
CCNDBP1-206ENST00000565296 SALL3Q9BXA9 1300 aa16.97■□□□□ 0.31
CCNDBP1-206ENST00000565296 USP17L8P0C7I0 530 aa16.97■□□□□ 0.31
CCNDBP1-206ENST00000565296 VEGFAP15692 232 aaPredicted RBP16.97■□□□□ 0.31
CCNDBP1-206ENST00000565296 ZNF280AP59817 542 aaPredicted RBP16.97■□□□□ 0.31
CCNDBP1-206ENST00000565296 TSHZ3Q63HK5 1081 aa16.97■□□□□ 0.31
CCNDBP1-206ENST00000565296 CHD1LQ86WJ1 897 aa16.97■□□□□ 0.31
CCNDBP1-206ENST00000565296 WDR66Q8TBY9 1149 aa16.97■□□□□ 0.31
CCNDBP1-206ENST00000565296 TBC1D22AQ8WUA7 517 aa16.97■□□□□ 0.31
CCNDBP1-206ENST00000565296 TAF1DQ9H5J8 278 aaPredicted RBP16.97■□□□□ 0.31
CCNDBP1-206ENST00000565296 HACL1Q9UJ83 578 aa16.97■□□□□ 0.31
CCNDBP1-206ENST00000565296 NDUFB9Q9Y6M9 179 aa16.97■□□□□ 0.31
CCNDBP1-206ENST00000565296 SALL1Q9NSC2 1324 aa16.96■□□□□ 0.31
CCNDBP1-206ENST00000565296 IQCA1LA6NCM1 817 aa16.96■□□□□ 0.3
CCNDBP1-206ENST00000565296 F8W031 263 aaPredicted RBP16.96■□□□□ 0.3
CCNDBP1-206ENST00000565296 KIF3CO14782 793 aa16.96■□□□□ 0.3
CCNDBP1-206ENST00000565296 EPHX2P34913 555 aa16.96■□□□□ 0.3
CCNDBP1-206ENST00000565296 TBC1D9Q6ZT07 1266 aa16.96■□□□□ 0.3
CCNDBP1-206ENST00000565296 CYP2E1P05181 493 aaPredicted RBP16.95■□□□□ 0.3
CCNDBP1-206ENST00000565296 ATP5JP18859 108 aa16.95■□□□□ 0.3
CCNDBP1-206ENST00000565296 LMOD1P29536 600 aaPredicted RBP16.95■□□□□ 0.3
CCNDBP1-206ENST00000565296 PRDX5P30044 214 aa16.95■□□□□ 0.3
CCNDBP1-206ENST00000565296 ZAP70P43403 619 aa16.95■□□□□ 0.3
CCNDBP1-206ENST00000565296 SAMD7Q7Z3H4 446 aa16.95■□□□□ 0.3
CCNDBP1-206ENST00000565296 ECHDC1Q9NTX5 307 aa16.95■□□□□ 0.3
CCNDBP1-206ENST00000565296 HIRAP54198 1017 aaPredicted RBP16.94■□□□□ 0.3
CCNDBP1-206ENST00000565296 TRPM4Q8TD43 1214 aa16.94■□□□□ 0.3
CCNDBP1-206ENST00000565296 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.94■□□□□ 0.3
CCNDBP1-206ENST00000565296 H7C1D1 291 aa16.93■□□□□ 0.3
CCNDBP1-206ENST00000565296 POTEIP0CG38 1075 aa16.93■□□□□ 0.3
CCNDBP1-206ENST00000565296 POTEJP0CG39 1038 aa16.93■□□□□ 0.3
CCNDBP1-206ENST00000565296 BOLA2Q9H3K6 86 aa16.93■□□□□ 0.3
CCNDBP1-206ENST00000565296 ANTXR1Q9H6X2 564 aa16.93■□□□□ 0.3
CCNDBP1-206ENST00000565296 ADARB2Q9NS39 739 aaKnown RBP16.93■□□□□ 0.3
CCNDBP1-206ENST00000565296 TTF2Q9UNY4 1162 aaKnown RBP16.93■□□□□ 0.3
CCNDBP1-206ENST00000565296 MX1P20591 662 aa16.93■□□□□ 0.3
CCNDBP1-206ENST00000565296 TBC1D10BQ4KMP7 808 aaPredicted RBP16.93■□□□□ 0.3
CCNDBP1-206ENST00000565296 OGFOD1Q8N543 542 aa16.93■□□□□ 0.3
CCNDBP1-206ENST00000565296 PI4K2BQ8TCG2 481 aa16.93■□□□□ 0.3
CCNDBP1-206ENST00000565296 ZNF384Q8TF68 577 aa16.93■□□□□ 0.3
CCNDBP1-206ENST00000565296 MYOZ2Q9NPC6 264 aa16.93■□□□□ 0.3
CCNDBP1-206ENST00000565296 PIH1D3Q9NQM4 214 aaKnown RBP16.93■□□□□ 0.3
CCNDBP1-206ENST00000565296 ZBTB47Q9UFB7 747 aaPredicted RBP16.93■□□□□ 0.3
CCNDBP1-206ENST00000565296 ABCF2Q9UG63 623 aa16.93■□□□□ 0.3
CCNDBP1-206ENST00000565296 SUGT1Q9Y2Z0 365 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms