RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 SNAP23O00161 211 aa18.88■□□□□ 0.61
SPG7-210ENST00000564409 DLGAP5Q15398 846 aa18.88■□□□□ 0.61
SPG7-210ENST00000564409 TRMT2AQ8IZ69 625 aaKnown RBP18.88■□□□□ 0.61
SPG7-210ENST00000564409 PLIN1O60240 522 aa18.87■□□□□ 0.61
SPG7-210ENST00000564409 KIF23Q02241 960 aaPredicted RBP18.87■□□□□ 0.61
SPG7-210ENST00000564409 BICC1Q9H694 974 aaKnown RBP18.87■□□□□ 0.61
SPG7-210ENST00000564409 RIPOR2Q9Y4F9 1068 aa18.87■□□□□ 0.61
SPG7-210ENST00000564409 FAM205AQ6ZU69 1335 aa18.86■□□□□ 0.61
SPG7-210ENST00000564409 MYO1BO43795 1136 aa18.86■□□□□ 0.61
SPG7-210ENST00000564409 CERS5Q8N5B7 392 aa18.86■□□□□ 0.61
SPG7-210ENST00000564409 ZIC5Q96T25 663 aa18.86■□□□□ 0.61
SPG7-210ENST00000564409 PPP2R3BQ9Y5P8 575 aa18.86■□□□□ 0.61
SPG7-210ENST00000564409 HIBADHP31937 336 aaKnown RBP18.85■□□□□ 0.61
SPG7-210ENST00000564409 ARMC9Q7Z3E5 817 aa18.85■□□□□ 0.61
SPG7-210ENST00000564409 RASAL3Q86YV0 1011 aa18.85■□□□□ 0.61
SPG7-210ENST00000564409 TDRD7Q8NHU6 1098 aaKnown RBP18.85■□□□□ 0.61
SPG7-210ENST00000564409 ABHD8Q96I13 439 aa18.85■□□□□ 0.61
SPG7-210ENST00000564409 USP44Q9H0E7 712 aa18.85■□□□□ 0.61
SPG7-210ENST00000564409 TSKSQ9UJT2 592 aa18.85■□□□□ 0.61
SPG7-210ENST00000564409 TTLL12Q14166 644 aaPredicted RBP18.84■□□□□ 0.61
SPG7-210ENST00000564409 ANKRD44Q8N8A2 993 aa18.84■□□□□ 0.61
SPG7-210ENST00000564409 CSRNP1Q96S65 589 aa18.84■□□□□ 0.61
SPG7-210ENST00000564409 SMC4Q9NTJ3 1288 aa18.84■□□□□ 0.61
SPG7-210ENST00000564409 HDAC5Q9UQL6 1122 aa18.84■□□□□ 0.61
SPG7-210ENST00000564409 FAM84BQ96KN1 310 aaPredicted RBP18.83■□□□□ 0.6
SPG7-210ENST00000564409 PUS3Q9BZE2 481 aaKnown RBP18.83■□□□□ 0.6
SPG7-210ENST00000564409 SPDYE2BA6NHP3 402 aa18.82■□□□□ 0.6
SPG7-210ENST00000564409 UNCXA6NJT0 531 aa18.82■□□□□ 0.6
SPG7-210ENST00000564409 UBE2Q2LH0YL09 131 aa18.82■□□□□ 0.6
SPG7-210ENST00000564409 SPDYE6P0CI01 402 aa18.82■□□□□ 0.6
SPG7-210ENST00000564409 CFAP100Q494V2 611 aa18.82■□□□□ 0.6
SPG7-210ENST00000564409 CDCA7LQ96GN5 454 aa18.82■□□□□ 0.6
SPG7-210ENST00000564409 DEFB129Q9H1M3 183 aa18.82■□□□□ 0.6
SPG7-210ENST00000564409 RNF186Q9NXI6 227 aa18.82■□□□□ 0.6
SPG7-210ENST00000564409 ARAP2Q8WZ64 1704 aa18.82■□□□□ 0.6
SPG7-210ENST00000564409 PDE8BO95263 885 aa18.81■□□□□ 0.6
SPG7-210ENST00000564409 CAVIN4Q5BKX8 364 aa18.81■□□□□ 0.6
SPG7-210ENST00000564409 METTL24Q5JXM2 366 aa18.81■□□□□ 0.6
SPG7-210ENST00000564409 MFSD14BQ5SR56 506 aa18.81■□□□□ 0.6
SPG7-210ENST00000564409 PRAMEF18Q5VWM3 479 aa18.81■□□□□ 0.6
SPG7-210ENST00000564409 VPS37DQ86XT2 251 aa18.81■□□□□ 0.6
SPG7-210ENST00000564409 SERPINA10Q9UK55 444 aa18.81■□□□□ 0.6
SPG7-210ENST00000564409 SCAF8Q9UPN6 1271 aaKnown RBP18.81■□□□□ 0.6
SPG7-210ENST00000564409 KIF16BQ96L93 1317 aa18.8■□□□□ 0.6
SPG7-210ENST00000564409 F8W031 263 aaPredicted RBP18.8■□□□□ 0.6
SPG7-210ENST00000564409 TRPA1O75762 1119 aa18.8■□□□□ 0.6
SPG7-210ENST00000564409 GYG1P46976 350 aa18.8■□□□□ 0.6
SPG7-210ENST00000564409 SUPT20HL1Q3ZLR7 823 aa18.8■□□□□ 0.6
SPG7-210ENST00000564409 FBXO33Q7Z6M2 555 aa18.8■□□□□ 0.6
SPG7-210ENST00000564409 TBC1D22AQ8WUA7 517 aa18.8■□□□□ 0.6
SPG7-210ENST00000564409 PPP1R12BO60237 982 aaPredicted RBP18.79■□□□□ 0.6
SPG7-210ENST00000564409 TNFAIP1Q13829 316 aa18.79■□□□□ 0.6
SPG7-210ENST00000564409 MAP3K11Q16584 847 aa18.79■□□□□ 0.6
SPG7-210ENST00000564409 LDLRAD1Q5T700 205 aa18.79■□□□□ 0.6
SPG7-210ENST00000564409 MOB2Q70IA6 237 aa18.79■□□□□ 0.6
SPG7-210ENST00000564409 VGLL2Q8N8G2 317 aa18.79■□□□□ 0.6
SPG7-210ENST00000564409 PRMT6Q96LA8 375 aaPredicted RBP18.79■□□□□ 0.6
SPG7-210ENST00000564409 API5Q9BZZ5 524 aaKnown RBP18.79■□□□□ 0.6
SPG7-210ENST00000564409 FBXO3Q9UK99 471 aa18.79■□□□□ 0.6
SPG7-210ENST00000564409 TM4SF4P48230 202 aa18.78■□□□□ 0.6
SPG7-210ENST00000564409 RBM5P52756 815 aaKnown RBP eCLIP18.78■□□□□ 0.65e-7■■■■□ 20
SPG7-210ENST00000564409 HDLBPQ00341 1268 aaKnown RBP18.78■□□□□ 0.6
SPG7-210ENST00000564409 LRRC24Q50LG9 513 aa18.78■□□□□ 0.6
SPG7-210ENST00000564409 TTF2Q9UNY4 1162 aaKnown RBP18.78■□□□□ 0.6
SPG7-210ENST00000564409 IFIT1P09914 478 aaKnown RBP18.77■□□□□ 0.6
SPG7-210ENST00000564409 UBTFL1P0CB47 393 aaPredicted RBP18.77■□□□□ 0.6
SPG7-210ENST00000564409 PTPN12Q05209 780 aaKnown RBP18.77■□□□□ 0.6
SPG7-210ENST00000564409 SREBF2Q12772 1141 aa18.77■□□□□ 0.6
SPG7-210ENST00000564409 PUM3Q15397 648 aaKnown RBP18.77■□□□□ 0.6
SPG7-210ENST00000564409 MRIQ9BWK5 157 aa18.77■□□□□ 0.6
SPG7-210ENST00000564409 MCOLN1Q9GZU1 580 aa18.77■□□□□ 0.6
SPG7-210ENST00000564409 EYA2O00167 538 aa18.76■□□□□ 0.59
SPG7-210ENST00000564409 FRAT2O75474 233 aaPredicted RBP18.76■□□□□ 0.59
SPG7-210ENST00000564409 NOM1Q5C9Z4 860 aaKnown RBP18.76■□□□□ 0.59
SPG7-210ENST00000564409 ARHGAP45Q92619 1136 aa18.76■□□□□ 0.59
SPG7-210ENST00000564409 ANGEL1Q9UNK9 670 aaKnown RBP18.76■□□□□ 0.59
SPG7-210ENST00000564409 JAG2Q9Y219 1238 aa18.76■□□□□ 0.59
SPG7-210ENST00000564409 SUGT1Q9Y2Z0 365 aa18.76■□□□□ 0.59
SPG7-210ENST00000564409 CLRN2A0PK11 232 aa18.75■□□□□ 0.59
SPG7-210ENST00000564409 INHBEP58166 350 aa18.75■□□□□ 0.59
SPG7-210ENST00000564409 DGKZQ13574 1117 aa18.75■□□□□ 0.59
SPG7-210ENST00000564409 SPDYE2Q495Y8 402 aa18.75■□□□□ 0.59
SPG7-210ENST00000564409 VEZTQ9HBM0 779 aa18.75■□□□□ 0.59
SPG7-210ENST00000564409 NOB1Q9ULX3 412 aaKnown RBP18.75■□□□□ 0.59
SPG7-210ENST00000564409 MAST3O60307 1309 aa18.74■□□□□ 0.59
SPG7-210ENST00000564409 MYH13Q9UKX3 1938 aa18.74■□□□□ 0.59
SPG7-210ENST00000564409 LAMB1P07942 1786 aa18.74■□□□□ 0.59
SPG7-210ENST00000564409 CIAO1O76071 339 aa18.74■□□□□ 0.59
SPG7-210ENST00000564409 ZBTB48P10074 688 aaPredicted RBP18.74■□□□□ 0.59
SPG7-210ENST00000564409 FGFR2P21802 821 aa18.74■□□□□ 0.59
SPG7-210ENST00000564409 IREB2P48200 963 aaKnown RBP18.74■□□□□ 0.59
SPG7-210ENST00000564409 RFX5P48382 616 aaPredicted RBP18.74■□□□□ 0.59
SPG7-210ENST00000564409 DZIP1LQ8IYY4 767 aaKnown RBP18.74■□□□□ 0.59
SPG7-210ENST00000564409 KLHDC4Q8TBB5 520 aa18.74■□□□□ 0.59
SPG7-210ENST00000564409 LPIN2Q92539 896 aa18.74■□□□□ 0.59
SPG7-210ENST00000564409 SLC10A4Q96EP9 437 aa18.74■□□□□ 0.59
SPG7-210ENST00000564409 PCDHAC2Q9Y5I4 1007 aa18.74■□□□□ 0.59
SPG7-210ENST00000564409 CCDC85CA6NKD9 419 aa18.73■□□□□ 0.59
SPG7-210ENST00000564409 ALDH1A1P00352 501 aa18.73■□□□□ 0.59
SPG7-210ENST00000564409 SLC5A1P13866 664 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms