RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 FAM205AQ6ZU69 1335 aa21.12■□□□□ 0.97
CCNF-203ENST00000564236 TRMT2AQ8IZ69 625 aaKnown RBP21.12■□□□□ 0.97
CCNF-203ENST00000564236 RNF186Q9NXI6 227 aa21.12■□□□□ 0.97
CCNF-203ENST00000564236 SCAF8Q9UPN6 1271 aaKnown RBP21.12■□□□□ 0.97
CCNF-203ENST00000564236 NF2P35240 595 aa21.11■□□□□ 0.97
CCNF-203ENST00000564236 ALDH1L2Q3SY69 923 aa21.11■□□□□ 0.97
CCNF-203ENST00000564236 TDRD7Q8NHU6 1098 aaKnown RBP21.11■□□□□ 0.97
CCNF-203ENST00000564236 SSH1Q8WYL5 1049 aa21.11■□□□□ 0.97
CCNF-203ENST00000564236 MROH5Q6ZUA9 1318 aa21.1■□□□□ 0.97
CCNF-203ENST00000564236 DLGAP5Q15398 846 aa21.1■□□□□ 0.97
CCNF-203ENST00000564236 PRAMEF18Q5VWM3 479 aa21.1■□□□□ 0.97
CCNF-203ENST00000564236 MOB2Q70IA6 237 aa21.1■□□□□ 0.97
CCNF-203ENST00000564236 ANKRD44Q8N8A2 993 aa21.1■□□□□ 0.97
CCNF-203ENST00000564236 BICC1Q9H694 974 aaKnown RBP21.1■□□□□ 0.97
CCNF-203ENST00000564236 PPP2R3BQ9Y5P8 575 aa21.1■□□□□ 0.97
CCNF-203ENST00000564236 SPDYE2BA6NHP3 402 aa21.09■□□□□ 0.97
CCNF-203ENST00000564236 SPDYE6P0CI01 402 aa21.09■□□□□ 0.97
CCNF-203ENST00000564236 PUS3Q9BZE2 481 aaKnown RBP21.09■□□□□ 0.97
CCNF-203ENST00000564236 UBE2Q2LH0YL09 131 aa21.08■□□□□ 0.97
CCNF-203ENST00000564236 MAP3K11Q16584 847 aa21.08■□□□□ 0.97
CCNF-203ENST00000564236 LDLRAD1Q5T700 205 aa21.08■□□□□ 0.97
CCNF-203ENST00000564236 FAM84BQ96KN1 310 aaPredicted RBP21.08■□□□□ 0.97
CCNF-203ENST00000564236 MCOLN1Q9GZU1 580 aa21.08■□□□□ 0.97
CCNF-203ENST00000564236 USP44Q9H0E7 712 aa21.08■□□□□ 0.97
CCNF-203ENST00000564236 DEFB129Q9H1M3 183 aa21.08■□□□□ 0.97
CCNF-203ENST00000564236 TRPA1O75762 1119 aa21.07■□□□□ 0.96
CCNF-203ENST00000564236 CT47B1P0C2W7 299 aaPredicted RBP21.07■□□□□ 0.96
CCNF-203ENST00000564236 VGLL2Q8N8G2 317 aa21.07■□□□□ 0.96
CCNF-203ENST00000564236 UNCXA6NJT0 531 aa21.06■□□□□ 0.96
CCNF-203ENST00000564236 PLIN1O60240 522 aa21.06■□□□□ 0.96
CCNF-203ENST00000564236 HIBADHP31937 336 aaKnown RBP21.06■□□□□ 0.96
CCNF-203ENST00000564236 TM4SF4P48230 202 aa21.06■□□□□ 0.96
CCNF-203ENST00000564236 CFAP100Q494V2 611 aa21.06■□□□□ 0.96
CCNF-203ENST00000564236 ARMC9Q7Z3E5 817 aa21.06■□□□□ 0.96
CCNF-203ENST00000564236 FBXO33Q7Z6M2 555 aa21.06■□□□□ 0.96
CCNF-203ENST00000564236 KIF16BQ96L93 1317 aa21.05■□□□□ 0.96
CCNF-203ENST00000564236 MYO1BO43795 1136 aa21.05■□□□□ 0.96
CCNF-203ENST00000564236 RGS19P49795 217 aa21.05■□□□□ 0.96
CCNF-203ENST00000564236 NOM1Q5C9Z4 860 aaKnown RBP21.05■□□□□ 0.96
CCNF-203ENST00000564236 PRMT6Q96LA8 375 aaPredicted RBP21.05■□□□□ 0.96
CCNF-203ENST00000564236 PCDHAC2Q9Y5I4 1007 aa21.05■□□□□ 0.96
CCNF-203ENST00000564236 SSC5DA1L4H1 1573 aa21.05■□□□□ 0.96
CCNF-203ENST00000564236 CCER2I3L3R5 266 aa21.04■□□□□ 0.96
CCNF-203ENST00000564236 GYG1P46976 350 aa21.04■□□□□ 0.96
CCNF-203ENST00000564236 PTPN12Q05209 780 aaKnown RBP21.04■□□□□ 0.96
CCNF-203ENST00000564236 MFSD14BQ5SR56 506 aa21.04■□□□□ 0.96
CCNF-203ENST00000564236 CDCA7LQ96GN5 454 aa21.04■□□□□ 0.96
CCNF-203ENST00000564236 CFHR5Q9BXR6 569 aa21.04■□□□□ 0.96
CCNF-203ENST00000564236 SERPINA10Q9UK55 444 aa21.04■□□□□ 0.96
CCNF-203ENST00000564236 PDE8BO95263 885 aa21.03■□□□□ 0.96
CCNF-203ENST00000564236 DGKZQ13574 1117 aa21.03■□□□□ 0.96
CCNF-203ENST00000564236 TTLL12Q14166 644 aaPredicted RBP21.03■□□□□ 0.96
CCNF-203ENST00000564236 LRRC24Q50LG9 513 aa21.03■□□□□ 0.96
CCNF-203ENST00000564236 ECM29Q5VYK3 1845 aa21.02■□□□□ 0.96
CCNF-203ENST00000564236 F8W031 263 aaPredicted RBP21.02■□□□□ 0.96
CCNF-203ENST00000564236 AOX1Q06278 1338 aa21.02■□□□□ 0.95
CCNF-203ENST00000564236 ARAP2Q8WZ64 1704 aa21.01■□□□□ 0.95
CCNF-203ENST00000564236 CASP8AP2Q9UKL3 1982 aa21.01■□□□□ 0.95
CCNF-203ENST00000564236 FGFR2P21802 821 aa21.01■□□□□ 0.95
CCNF-203ENST00000564236 RFX5P48382 616 aaPredicted RBP21.01■□□□□ 0.95
CCNF-203ENST00000564236 SUPT20HL1Q3ZLR7 823 aa21.01■□□□□ 0.95
CCNF-203ENST00000564236 SPDYE2Q495Y8 402 aa21.01■□□□□ 0.95
CCNF-203ENST00000564236 JAG2Q9Y219 1238 aa21.01■□□□□ 0.95
CCNF-203ENST00000564236 HDLBPQ00341 1268 aaKnown RBP21■□□□□ 0.95
CCNF-203ENST00000564236 SREBF2Q12772 1141 aa21■□□□□ 0.95
CCNF-203ENST00000564236 METTL24Q5JXM2 366 aa21■□□□□ 0.95
CCNF-203ENST00000564236 SPRYD7Q5W111 196 aa21■□□□□ 0.95
CCNF-203ENST00000564236 SMC4Q9NTJ3 1288 aa21■□□□□ 0.95
CCNF-203ENST00000564236 ANGEL1Q9UNK9 670 aaKnown RBP21■□□□□ 0.95
CCNF-203ENST00000564236 AKAP11Q9UKA4 1901 aa21■□□□□ 0.95
CCNF-203ENST00000564236 CLRN2A0PK11 232 aa20.99■□□□□ 0.95
CCNF-203ENST00000564236 CCDC85CA6NKD9 419 aa20.99■□□□□ 0.95
CCNF-203ENST00000564236 PPP1R12BO60237 982 aaPredicted RBP20.99■□□□□ 0.95
CCNF-203ENST00000564236 TNFAIP1Q13829 316 aa20.99■□□□□ 0.95
CCNF-203ENST00000564236 CAVIN4Q5BKX8 364 aa20.99■□□□□ 0.95
CCNF-203ENST00000564236 TBC1D22AQ8WUA7 517 aa20.99■□□□□ 0.95
CCNF-203ENST00000564236 MRIQ9BWK5 157 aa20.99■□□□□ 0.95
CCNF-203ENST00000564236 FBXO3Q9UK99 471 aa20.99■□□□□ 0.95
CCNF-203ENST00000564236 TTF2Q9UNY4 1162 aaKnown RBP20.99■□□□□ 0.95
CCNF-203ENST00000564236 ZBTB48P10074 688 aaPredicted RBP20.98■□□□□ 0.95
CCNF-203ENST00000564236 RASA3Q14644 834 aa20.98■□□□□ 0.95
CCNF-203ENST00000564236 SUGT1Q9Y2Z0 365 aa20.98■□□□□ 0.95
CCNF-203ENST00000564236 EYA2O00167 538 aa20.97■□□□□ 0.95
CCNF-203ENST00000564236 INHBEP58166 350 aa20.97■□□□□ 0.95
CCNF-203ENST00000564236 PUM3Q15397 648 aaKnown RBP20.97■□□□□ 0.95
CCNF-203ENST00000564236 NBPF12Q5TAG4 269 aaPredicted RBP20.97■□□□□ 0.95
CCNF-203ENST00000564236 CTU1Q7Z7A3 348 aaKnown RBP20.97■□□□□ 0.95
CCNF-203ENST00000564236 VPS37DQ86XT2 251 aa20.97■□□□□ 0.95
CCNF-203ENST00000564236 DZIP1LQ8IYY4 767 aaKnown RBP20.97■□□□□ 0.95
CCNF-203ENST00000564236 KLHDC4Q8TBB5 520 aa20.97■□□□□ 0.95
CCNF-203ENST00000564236 ZNF70Q9UC06 446 aaPredicted RBP20.97■□□□□ 0.95
CCNF-203ENST00000564236 LAMB1P07942 1786 aa20.96■□□□□ 0.95
CCNF-203ENST00000564236 ZBTB22O15209 634 aa20.96■□□□□ 0.95
CCNF-203ENST00000564236 CRKP46108 304 aa20.96■□□□□ 0.95
CCNF-203ENST00000564236 RBM5P52756 815 aaKnown RBP eCLIP20.96■□□□□ 0.95
CCNF-203ENST00000564236 PRKG1Q13976 671 aa20.96■□□□□ 0.95
CCNF-203ENST00000564236 TEPSINQ96N21 525 aa20.96■□□□□ 0.95
CCNF-203ENST00000564236 VEZTQ9HBM0 779 aa20.96■□□□□ 0.95
CCNF-203ENST00000564236 MANSC4A6NHS7 340 aaPredicted RBP20.95■□□□□ 0.94
CCNF-203ENST00000564236 SLC10A4Q96EP9 437 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms