RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 PSMD1Q99460 953 aa15.71■□□□□ 0.11
SPG7-209ENST00000564047 ZC3H12CQ9C0D7 883 aaKnown RBP15.71■□□□□ 0.11
SPG7-209ENST00000564047 SDSP20132 328 aa15.7■□□□□ 0.1
SPG7-209ENST00000564047 WASHC4Q2M389 1173 aa15.7■□□□□ 0.1
SPG7-209ENST00000564047 GPR101Q96P66 508 aaPredicted RBP15.7■□□□□ 0.1
SPG7-209ENST00000564047 CACNA1SQ13698 1873 aa15.69■□□□□ 0.1
SPG7-209ENST00000564047 TRIM6-TRIM34B2RNG4 842 aa15.69■□□□□ 0.1
SPG7-209ENST00000564047 MCAMP43121 646 aa15.69■□□□□ 0.1
SPG7-209ENST00000564047 FKBP4Q02790 459 aaKnown RBP eCLIP15.69■□□□□ 0.1
SPG7-209ENST00000564047 SCARF1Q14162 830 aa15.69■□□□□ 0.1
SPG7-209ENST00000564047 CNTROBQ8N137 903 aa15.69■□□□□ 0.1
SPG7-209ENST00000564047 EVI5LQ96CN4 794 aa15.69■□□□□ 0.1
SPG7-209ENST00000564047 COA1Q9GZY4 146 aa15.69■□□□□ 0.1
SPG7-209ENST00000564047 VPS33BQ9H267 617 aa15.69■□□□□ 0.1
SPG7-209ENST00000564047 HMG20BQ9P0W2 317 aa15.69■□□□□ 0.1
SPG7-209ENST00000564047 CCDC88AQ3V6T2 1871 aa15.68■□□□□ 0.1
SPG7-209ENST00000564047 GLTPD2A6NH11 291 aa15.68■□□□□ 0.1
SPG7-209ENST00000564047 RIMBP2O15034 1052 aa15.68■□□□□ 0.1
SPG7-209ENST00000564047 IL1R1P14778 569 aa15.68■□□□□ 0.1
SPG7-209ENST00000564047 RASGRF1Q13972 1273 aa15.68■□□□□ 0.1
SPG7-209ENST00000564047 SPATA5Q8NB90 893 aa15.68■□□□□ 0.1
SPG7-209ENST00000564047 TDRD7Q8NHU6 1098 aaKnown RBP15.68■□□□□ 0.1
SPG7-209ENST00000564047 DNAJC2Q99543 621 aaKnown RBP15.68■□□□□ 0.1
SPG7-209ENST00000564047 CD209Q9NNX6 404 aa15.68■□□□□ 0.1
SPG7-209ENST00000564047 DENND2AQ9ULE3 1009 aa15.68■□□□□ 0.1
SPG7-209ENST00000564047 PDS5AQ29RF7 1337 aaKnown RBP15.68■□□□□ 0.1
SPG7-209ENST00000564047 MAP4K4O95819 1239 aaPredicted RBP15.67■□□□□ 0.1
SPG7-209ENST00000564047 ZAP70P43403 619 aa15.67■□□□□ 0.1
SPG7-209ENST00000564047 KIAA2012Q0VF49 1180 aa15.67■□□□□ 0.1
SPG7-209ENST00000564047 RILPL2Q969X0 211 aa15.67■□□□□ 0.1
SPG7-209ENST00000564047 PAG1Q9NWQ8 432 aa15.67■□□□□ 0.1
SPG7-209ENST00000564047 LTBP3Q9NS15 1303 aa15.67■□□□□ 0.1
SPG7-209ENST00000564047 FRAT2O75474 233 aaPredicted RBP15.66■□□□□ 0.1
SPG7-209ENST00000564047 TTF1Q15361 905 aaPredicted RBP15.66■□□□□ 0.1
SPG7-209ENST00000564047 TICAM2Q86XR7 235 aa15.66■□□□□ 0.1
SPG7-209ENST00000564047 TAOK3Q9H2K8 898 aa15.66■□□□□ 0.1
SPG7-209ENST00000564047 SNRKQ9NRH2 765 aa15.66■□□□□ 0.1
SPG7-209ENST00000564047 NFKBIEO00221 500 aa15.65■□□□□ 0.1
SPG7-209ENST00000564047 GOLIM4O00461 696 aa15.65■□□□□ 0.1
SPG7-209ENST00000564047 PPIP5K2O43314 1243 aa15.65■□□□□ 0.1
SPG7-209ENST00000564047 CYP2E1P05181 493 aaPredicted RBP15.65■□□□□ 0.1
SPG7-209ENST00000564047 LMNB1P20700 586 aa15.65■□□□□ 0.1
SPG7-209ENST00000564047 RASSF7Q02833 373 aa15.65■□□□□ 0.1
SPG7-209ENST00000564047 AOC3Q16853 763 aa15.65■□□□□ 0.1
SPG7-209ENST00000564047 PI16Q6UXB8 463 aa15.65■□□□□ 0.1
SPG7-209ENST00000564047 PODNQ7Z5L7 613 aa15.65■□□□□ 0.1
SPG7-209ENST00000564047 KBTBD3Q8NAB2 608 aa15.65■□□□□ 0.1
SPG7-209ENST00000564047 EDC3Q96F86 508 aaKnown RBP15.65■□□□□ 0.1
SPG7-209ENST00000564047 IQSEC3Q9UPP2 1182 aaPredicted RBP15.65■□□□□ 0.1
SPG7-209ENST00000564047 NDUFB9Q9Y6M9 179 aa15.65■□□□□ 0.1
SPG7-209ENST00000564047 G3V3G9 751 aa15.64■□□□□ 0.09
SPG7-209ENST00000564047 CDC45O75419 566 aa15.64■□□□□ 0.09
SPG7-209ENST00000564047 DCAF8Q5TAQ9 597 aa15.64■□□□□ 0.09
SPG7-209ENST00000564047 TIAM2Q8IVF5 1701 aa15.64■□□□□ 0.09
SPG7-209ENST00000564047 ANTXR1Q9H6X2 564 aa15.64■□□□□ 0.09
SPG7-209ENST00000564047 COL1A1P02452 1464 aaPredicted RBP15.64■□□□□ 0.09
SPG7-209ENST00000564047 RFX7Q2KHR2 1363 aa15.63■□□□□ 0.09
SPG7-209ENST00000564047 IARSP41252 1262 aaKnown RBP15.63■□□□□ 0.09
SPG7-209ENST00000564047 DOK7Q18PE1 504 aa15.63■□□□□ 0.09
SPG7-209ENST00000564047 WDR66Q8TBY9 1149 aa15.63■□□□□ 0.09
SPG7-209ENST00000564047 FSD1Q9BTV5 496 aa15.63■□□□□ 0.09
SPG7-209ENST00000564047 ZNF277Q9NRM2 450 aaPredicted RBP15.63■□□□□ 0.09
SPG7-209ENST00000564047 FAM205AQ6ZU69 1335 aa15.63■□□□□ 0.09
SPG7-209ENST00000564047 SALL1Q9NSC2 1324 aa15.63■□□□□ 0.09
SPG7-209ENST00000564047 HIP1O00291 1037 aa15.62■□□□□ 0.09
SPG7-209ENST00000564047 ECE2O60344 883 aa15.62■□□□□ 0.09
SPG7-209ENST00000564047 IGSF3O75054 1194 aa15.62■□□□□ 0.09
SPG7-209ENST00000564047 LRRFIP1Q32MZ4 808 aaKnown RBP15.62■□□□□ 0.09
SPG7-209ENST00000564047 LARGE2Q8N3Y3 721 aa15.62■□□□□ 0.09
SPG7-209ENST00000564047 PIH1D3Q9NQM4 214 aaKnown RBP15.62■□□□□ 0.09
SPG7-209ENST00000564047 PRDM10Q9NQV6 1147 aa15.62■□□□□ 0.09
SPG7-209ENST00000564047 CREBZFQ9NS37 354 aa15.62■□□□□ 0.09
SPG7-209ENST00000564047 CHAF1AQ13111 956 aaPredicted RBP15.61■□□□□ 0.09
SPG7-209ENST00000564047 C8orf34Q49A92 452 aa15.61■□□□□ 0.09
SPG7-209ENST00000564047 ZSCAN25Q6NSZ9 544 aa15.61■□□□□ 0.09
SPG7-209ENST00000564047 DPY19L2Q6NUT2 758 aa15.61■□□□□ 0.09
SPG7-209ENST00000564047 CASC1Q6TDU7 716 aa15.61■□□□□ 0.09
SPG7-209ENST00000564047 ZGPATQ8N5A5 531 aaKnown RBP15.61■□□□□ 0.09
SPG7-209ENST00000564047 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.61■□□□□ 0.093e-7■■□□□ 12.9
SPG7-209ENST00000564047 DBNDD1Q9H9R9 158 aa15.61■□□□□ 0.09
SPG7-209ENST00000564047 MKRN1Q9UHC7 482 aaKnown RBP15.61■□□□□ 0.09
SPG7-209ENST00000564047 AKAP11Q9UKA4 1901 aa15.6■□□□□ 0.09
SPG7-209ENST00000564047 ZFYP08048 801 aaPredicted RBP15.6■□□□□ 0.09
SPG7-209ENST00000564047 CHMLP26374 656 aa15.6■□□□□ 0.09
SPG7-209ENST00000564047 MAP3K12Q12852 859 aa15.6■□□□□ 0.09
SPG7-209ENST00000564047 TBC1D9Q6ZT07 1266 aa15.6■□□□□ 0.09
SPG7-209ENST00000564047 TBC1D22AQ8WUA7 517 aa15.6■□□□□ 0.09
SPG7-209ENST00000564047 AIDAQ96BJ3 306 aa15.6■□□□□ 0.09
SPG7-209ENST00000564047 FER1L6Q2WGJ9 1857 aa15.6■□□□□ 0.09
SPG7-209ENST00000564047 FOXN1O15353 648 aa15.59■□□□□ 0.09
SPG7-209ENST00000564047 GTF2IP78347 998 aa15.59■□□□□ 0.09
SPG7-209ENST00000564047 STRIP1Q5VSL9 837 aa15.59■□□□□ 0.09
SPG7-209ENST00000564047 SPTY2D1Q68D10 685 aaPredicted RBP15.59■□□□□ 0.09
SPG7-209ENST00000564047 TTLL5Q6EMB2 1281 aa15.59■□□□□ 0.09
SPG7-209ENST00000564047 TMED8Q6PL24 325 aaPredicted RBP15.59■□□□□ 0.09
SPG7-209ENST00000564047 NIM1KQ8IY84 436 aa15.59■□□□□ 0.09
SPG7-209ENST00000564047 DIAPH3Q9NSV4 1193 aa15.59■□□□□ 0.09
SPG7-209ENST00000564047 LRP2BPQ9P2M1 347 aa15.59■□□□□ 0.09
SPG7-209ENST00000564047 ABCF2Q9UG63 623 aa15.59■□□□□ 0.09
SPG7-209ENST00000564047 DICER1Q9UPY3 1922 aaKnown RBP15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 133.1 ms