RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 ZBED3Q96IU2 234 aaPredicted RBP26.5■■□□□ 1.83
HERC2-204ENST00000563945 CNNM1Q9NRU3 951 aa26.5■■□□□ 1.83
HERC2-204ENST00000563945 C9orf78Q9NZ63 289 aaPredicted RBP26.5■■□□□ 1.83
HERC2-204ENST00000563945 GPR25O00155 361 aa26.49■■□□□ 1.83
HERC2-204ENST00000563945 BEND3Q5T5X7 828 aa26.49■■□□□ 1.83
HERC2-204ENST00000563945 LDHAL6AQ6ZMR3 332 aa26.49■■□□□ 1.83
HERC2-204ENST00000563945 HPS5Q9UPZ3 1129 aa26.49■■□□□ 1.83
HERC2-204ENST00000563945 SLC34A2O95436 690 aa26.48■■□□□ 1.83
HERC2-204ENST00000563945 ALDH1A1P00352 501 aa26.48■■□□□ 1.83
HERC2-204ENST00000563945 RBM5P52756 815 aaKnown RBP eCLIP26.48■■□□□ 1.83
HERC2-204ENST00000563945 SUPT20HL1Q3ZLR7 823 aa26.48■■□□□ 1.83
HERC2-204ENST00000563945 LDLRAD1Q5T700 205 aa26.48■■□□□ 1.83
HERC2-204ENST00000563945 MTMR14Q8NCE2 650 aa26.48■■□□□ 1.83
HERC2-204ENST00000563945 PPP2R3BQ9Y5P8 575 aa26.48■■□□□ 1.83
HERC2-204ENST00000563945 IL1R1P14778 569 aa26.47■■□□□ 1.83
HERC2-204ENST00000563945 INHBEP58166 350 aa26.47■■□□□ 1.83
HERC2-204ENST00000563945 CFAP100Q494V2 611 aa26.47■■□□□ 1.83
HERC2-204ENST00000563945 NOM1Q5C9Z4 860 aaKnown RBP26.47■■□□□ 1.83
HERC2-204ENST00000563945 SPRYD7Q5W111 196 aa26.47■■□□□ 1.83
HERC2-204ENST00000563945 GRM8O00222 908 aa26.46■■□□□ 1.83
HERC2-204ENST00000563945 FKTNO75072 461 aa26.46■■□□□ 1.83
HERC2-204ENST00000563945 FKBP1AP62942 108 aaKnown RBP26.46■■□□□ 1.83
HERC2-204ENST00000563945 CERS5Q8N5B7 392 aa26.46■■□□□ 1.83
HERC2-204ENST00000563945 VEZTQ9HBM0 779 aa26.46■■□□□ 1.83
HERC2-204ENST00000563945 COL1A1P02452 1464 aaPredicted RBP26.46■■□□□ 1.83
HERC2-204ENST00000563945 MANSC4A6NHS7 340 aaPredicted RBP26.45■■□□□ 1.82
HERC2-204ENST00000563945 SLC4A10Q6U841 1118 aa26.45■■□□□ 1.82
HERC2-204ENST00000563945 CLRN2A0PK11 232 aa26.44■■□□□ 1.82
HERC2-204ENST00000563945 ZNF594Q96JF6 807 aaPredicted RBP26.44■■□□□ 1.82
HERC2-204ENST00000563945 JAG2Q9Y219 1238 aa26.44■■□□□ 1.82
HERC2-204ENST00000563945 FZD1Q9UP38 647 aa26.43■■□□□ 1.82
HERC2-204ENST00000563945 ZNF646O15015 1829 aaPredicted RBP26.43■■□□□ 1.82
HERC2-204ENST00000563945 PDE4DIPQ5VU43 2346 aa26.43■■□□□ 1.82
HERC2-204ENST00000563945 IRS2Q9Y4H2 1338 aa26.42■■□□□ 1.82
HERC2-204ENST00000563945 SPDYE2BA6NHP3 402 aa26.42■■□□□ 1.82
HERC2-204ENST00000563945 ALDH1L1O75891 902 aa26.42■■□□□ 1.82
HERC2-204ENST00000563945 SPDYE6P0CI01 402 aa26.42■■□□□ 1.82
HERC2-204ENST00000563945 IREB2P48200 963 aaKnown RBP26.42■■□□□ 1.82
HERC2-204ENST00000563945 FBXO46Q6PJ61 603 aaPredicted RBP26.42■■□□□ 1.82
HERC2-204ENST00000563945 PRMT6Q96LA8 375 aaPredicted RBP26.42■■□□□ 1.82
HERC2-204ENST00000563945 SRCIN1Q9C0H9 1055 aa26.42■■□□□ 1.82
HERC2-204ENST00000563945 UNCXA6NJT0 531 aa26.41■■□□□ 1.82
HERC2-204ENST00000563945 ZBTB48P10074 688 aaPredicted RBP26.41■■□□□ 1.82
HERC2-204ENST00000563945 MAP3K11Q16584 847 aa26.41■■□□□ 1.82
HERC2-204ENST00000563945 EPHA10Q5JZY3 1008 aa26.41■■□□□ 1.82
HERC2-204ENST00000563945 CFHR5Q9BXR6 569 aa26.41■■□□□ 1.82
HERC2-204ENST00000563945 OTUD7BQ6GQQ9 843 aa26.4■■□□□ 1.82
HERC2-204ENST00000563945 PCDHAC2Q9Y5I4 1007 aa26.4■■□□□ 1.82
HERC2-204ENST00000563945 TNFAIP1Q13829 316 aa26.39■■□□□ 1.82
HERC2-204ENST00000563945 UBE4AQ14139 1066 aa26.39■■□□□ 1.82
HERC2-204ENST00000563945 IFNL1Q8IU54 200 aa26.39■■□□□ 1.82
HERC2-204ENST00000563945 HIBADHP31937 336 aaKnown RBP26.38■■□□□ 1.81
HERC2-204ENST00000563945 NBPF12Q5TAG4 269 aaPredicted RBP26.38■■□□□ 1.81
HERC2-204ENST00000563945 WNK4Q96J92 1243 aa26.38■■□□□ 1.81
HERC2-204ENST00000563945 CLMNQ96JQ2 1002 aa26.38■■□□□ 1.81
HERC2-204ENST00000563945 RASA3Q14644 834 aa26.37■■□□□ 1.81
HERC2-204ENST00000563945 MFSD14BQ5SR56 506 aa26.37■■□□□ 1.81
HERC2-204ENST00000563945 VPS37DQ86XT2 251 aa26.37■■□□□ 1.81
HERC2-204ENST00000563945 FAM9BQ8IZU0 186 aa26.37■■□□□ 1.81
HERC2-204ENST00000563945 R3HDMLQ9H3Y0 253 aa26.37■■□□□ 1.81
HERC2-204ENST00000563945 SPINK5Q9NQ38 1064 aaPredicted RBP26.37■■□□□ 1.81
HERC2-204ENST00000563945 TTF2Q9UNY4 1162 aaKnown RBP26.37■■□□□ 1.81
HERC2-204ENST00000563945 FAM205AQ6ZU69 1335 aa26.37■■□□□ 1.81
HERC2-204ENST00000563945 ANKRD13AQ8IZ07 590 aa26.36■■□□□ 1.81
HERC2-204ENST00000563945 GYG1P46976 350 aa26.35■■□□□ 1.81
HERC2-204ENST00000563945 TDRD7Q8NHU6 1098 aaKnown RBP26.35■■□□□ 1.81
HERC2-204ENST00000563945 SERPINA10Q9UK55 444 aa26.35■■□□□ 1.81
HERC2-204ENST00000563945 FRAT2O75474 233 aaPredicted RBP26.34■■□□□ 1.81
HERC2-204ENST00000563945 USP2O75604 605 aaPredicted RBP26.34■■□□□ 1.81
HERC2-204ENST00000563945 SUCLG2Q96I99 432 aa26.34■■□□□ 1.81
HERC2-204ENST00000563945 ZNF70Q9UC06 446 aaPredicted RBP26.34■■□□□ 1.81
HERC2-204ENST00000563945 TNNI2P48788 182 aa26.33■■□□□ 1.81
HERC2-204ENST00000563945 FAM84BQ96KN1 310 aaPredicted RBP26.33■■□□□ 1.81
HERC2-204ENST00000563945 TDRD3Q9H7E2 651 aaKnown RBP26.33■■□□□ 1.81
HERC2-204ENST00000563945 TRIM17Q9Y577 477 aa26.33■■□□□ 1.81
HERC2-204ENST00000563945 MROH5Q6ZUA9 1318 aa26.33■■□□□ 1.81
HERC2-204ENST00000563945 PUS3Q9BZE2 481 aaKnown RBP26.32■■□□□ 1.8
HERC2-204ENST00000563945 ECM29Q5VYK3 1845 aa26.31■■□□□ 1.8
HERC2-204ENST00000563945 ZEB1P37275 1124 aaPredicted RBP26.31■■□□□ 1.8
HERC2-204ENST00000563945 SPDYE2Q495Y8 402 aa26.31■■□□□ 1.8
HERC2-204ENST00000563945 CAVIN4Q5BKX8 364 aa26.31■■□□□ 1.8
HERC2-204ENST00000563945 PRPF38BQ5VTL8 546 aaKnown RBP26.31■■□□□ 1.8
HERC2-204ENST00000563945 ERO1AQ96HE7 468 aa26.31■■□□□ 1.8
HERC2-204ENST00000563945 SSC5DA1L4H1 1573 aa26.3■■□□□ 1.8
HERC2-204ENST00000563945 ZNF316A6NFI3 1004 aaPredicted RBP26.3■■□□□ 1.8
HERC2-204ENST00000563945 IGF2BP3O00425 579 aaKnown RBP eCLIP26.3■■□□□ 1.8
HERC2-204ENST00000563945 DZIP1LQ8IYY4 767 aaKnown RBP26.3■■□□□ 1.8
HERC2-204ENST00000563945 CHAF1AQ13111 956 aaPredicted RBP26.29■■□□□ 1.8
HERC2-204ENST00000563945 METTL24Q5JXM2 366 aa26.29■■□□□ 1.8
HERC2-204ENST00000563945 ELP3Q9H9T3 547 aa26.29■■□□□ 1.8
HERC2-204ENST00000563945 RIPOR2Q9Y4F9 1068 aa26.29■■□□□ 1.8
HERC2-204ENST00000563945 AOX1Q06278 1338 aa26.29■■□□□ 1.8
HERC2-204ENST00000563945 A0A1B0GUL6 1792 aa26.28■■□□□ 1.8
HERC2-204ENST00000563945 TCP10L2B9ZVM9 353 aa26.28■■□□□ 1.8
HERC2-204ENST00000563945 NBPF7P0C2Y1 421 aaPredicted RBP26.28■■□□□ 1.8
HERC2-204ENST00000563945 CRKP46108 304 aa26.28■■□□□ 1.8
HERC2-204ENST00000563945 OTOP1Q7RTM1 612 aa26.28■■□□□ 1.8
HERC2-204ENST00000563945 TBC1D22AQ8WUA7 517 aa26.28■■□□□ 1.8
HERC2-204ENST00000563945 TNRC18O15417 2968 aaPredicted RBP26.28■■□□□ 1.8
HERC2-204ENST00000563945 INTS3Q68E01 1043 aaKnown RBP26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms