RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 TAOK2Q9UL54 1235 aa14.21□□□□□ -0.13
SCAMP2-204ENST00000563829 L1RE1Q9UN81 338 aa14.21□□□□□ -0.13
SCAMP2-204ENST00000563829 HIP1O00291 1037 aa14.21□□□□□ -0.14
SCAMP2-204ENST00000563829 CBFA2T2O43439 604 aa14.21□□□□□ -0.14
SCAMP2-204ENST00000563829 TFRCP02786 760 aaKnown RBP14.21□□□□□ -0.14
SCAMP2-204ENST00000563829 MAP2K2P36507 400 aa14.21□□□□□ -0.14
SCAMP2-204ENST00000563829 CASP8Q14790 479 aa14.21□□□□□ -0.14
SCAMP2-204ENST00000563829 DNAJC21Q5F1R6 531 aaKnown RBP14.21□□□□□ -0.14
SCAMP2-204ENST00000563829 NAA16Q6N069 864 aaPredicted RBP14.21□□□□□ -0.14
SCAMP2-204ENST00000563829 SRGAP1Q7Z6B7 1085 aa14.21□□□□□ -0.14
SCAMP2-204ENST00000563829 TMEM139Q8IV31 216 aa14.21□□□□□ -0.14
SCAMP2-204ENST00000563829 VSTM4Q8IW00 320 aa14.21□□□□□ -0.14
SCAMP2-204ENST00000563829 SUGP1Q8IWZ8 645 aaKnown RBP14.21□□□□□ -0.14
SCAMP2-204ENST00000563829 NSUN7Q8NE18 718 aaKnown RBP14.21□□□□□ -0.14
SCAMP2-204ENST00000563829 ANKRD20A12PQ8NF67 263 aa14.21□□□□□ -0.14
SCAMP2-204ENST00000563829 EDC3Q96F86 508 aaKnown RBP14.21□□□□□ -0.14
SCAMP2-204ENST00000563829 ALDH8A1Q9H2A2 487 aaPredicted RBP14.21□□□□□ -0.14
SCAMP2-204ENST00000563829 HSD3B7Q9H2F3 369 aa14.21□□□□□ -0.14
SCAMP2-204ENST00000563829 CLTCQ00610 1675 aaKnown RBP14.2□□□□□ -0.14
SCAMP2-204ENST00000563829 ZNF202O95125 648 aa14.2□□□□□ -0.14
SCAMP2-204ENST00000563829 OTUD7BQ6GQQ9 843 aa14.2□□□□□ -0.14
SCAMP2-204ENST00000563829 MAP3K19Q56UN5 1328 aa14.2□□□□□ -0.14
SCAMP2-204ENST00000563829 AXDND1Q5T1B0 1012 aaPredicted RBP14.2□□□□□ -0.14
SCAMP2-204ENST00000563829 ILDR1Q86SU0 546 aaPredicted RBP14.2□□□□□ -0.14
SCAMP2-204ENST00000563829 FCHSD1Q86WN1 690 aa14.2□□□□□ -0.14
SCAMP2-204ENST00000563829 CLIC4Q9Y696 253 aa14.2□□□□□ -0.14
SCAMP2-204ENST00000563829 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.2□□□□□ -0.14
SCAMP2-204ENST00000563829 GOLGA6L9A6NEM1 432 aa14.2□□□□□ -0.14
SCAMP2-204ENST00000563829 CUTAO60888 179 aa14.2□□□□□ -0.14
SCAMP2-204ENST00000563829 PLEKHO1Q53GL0 409 aaPredicted RBP14.2□□□□□ -0.14
SCAMP2-204ENST00000563829 HMG20BQ9P0W2 317 aa14.2□□□□□ -0.14
SCAMP2-204ENST00000563829 PI4KAP2A4QPH2 592 aa14.19□□□□□ -0.14
SCAMP2-204ENST00000563829 PPFIA4O75335 1185 aa14.19□□□□□ -0.14
SCAMP2-204ENST00000563829 PI4KAP1Q8N8J0 262 aa14.19□□□□□ -0.14
SCAMP2-204ENST00000563829 HNRNPLLQ8WVV9 542 aaKnown RBP14.19□□□□□ -0.14
SCAMP2-204ENST00000563829 TLR7Q9NYK1 1049 aaKnown RBP14.19□□□□□ -0.14
SCAMP2-204ENST00000563829 A0A087WUV0 522 aaPredicted RBP14.19□□□□□ -0.14
SCAMP2-204ENST00000563829 ERLIN2O94905 339 aa14.19□□□□□ -0.14
SCAMP2-204ENST00000563829 CTDNEP1O95476 244 aa14.19□□□□□ -0.14
SCAMP2-204ENST00000563829 ANXA1P04083 346 aa14.19□□□□□ -0.14
SCAMP2-204ENST00000563829 VSNL1P62760 191 aa14.19□□□□□ -0.14
SCAMP2-204ENST00000563829 MTF1Q14872 753 aa14.19□□□□□ -0.14
SCAMP2-204ENST00000563829 SMARCC2Q8TAQ2 1214 aa14.19□□□□□ -0.14
SCAMP2-204ENST00000563829 FAM71BQ8TC56 605 aa14.19□□□□□ -0.14
SCAMP2-204ENST00000563829 FANCLQ9NW38 375 aa14.19□□□□□ -0.14
SCAMP2-204ENST00000563829 CHD2O14647 1828 aaKnown RBP14.19□□□□□ -0.14
SCAMP2-204ENST00000563829 CPS1P31327 1500 aa14.19□□□□□ -0.14
SCAMP2-204ENST00000563829 MYL5Q02045 173 aa14.18□□□□□ -0.14
SCAMP2-204ENST00000563829 RABEP2Q9H5N1 569 aa14.18□□□□□ -0.14
SCAMP2-204ENST00000563829 MRPL44Q9H9J2 332 aaKnown RBP14.18□□□□□ -0.14
SCAMP2-204ENST00000563829 XRN1Q8IZH2 1706 aaKnown RBP14.18□□□□□ -0.14
SCAMP2-204ENST00000563829 TAF5LO75529 589 aa14.18□□□□□ -0.14
SCAMP2-204ENST00000563829 CHGBP05060 677 aa14.18□□□□□ -0.14
SCAMP2-204ENST00000563829 KRT32Q14532 448 aa14.18□□□□□ -0.14
SCAMP2-204ENST00000563829 SWT1Q5T5J6 900 aaKnown RBP14.18□□□□□ -0.14
SCAMP2-204ENST00000563829 CCDC129Q6ZRS4 1044 aa14.18□□□□□ -0.14
SCAMP2-204ENST00000563829 KAT2BQ92831 832 aa14.18□□□□□ -0.14
SCAMP2-204ENST00000563829 EAF2Q96CJ1 260 aaPredicted RBP14.18□□□□□ -0.14
SCAMP2-204ENST00000563829 NUDT16Q96DE0 195 aaKnown RBP14.18□□□□□ -0.14
SCAMP2-204ENST00000563829 FAM212AQ96EL1 285 aa14.18□□□□□ -0.14
SCAMP2-204ENST00000563829 SUFUQ9UMX1 484 aa14.18□□□□□ -0.14
SCAMP2-204ENST00000563829 IKBKBO14920 756 aa14.18□□□□□ -0.14
SCAMP2-204ENST00000563829 FBXW10Q5XX13 1052 aa14.18□□□□□ -0.14
SCAMP2-204ENST00000563829 NEDD4P46934 1319 aa14.17□□□□□ -0.14
SCAMP2-204ENST00000563829 KIDINS220Q9ULH0 1771 aa14.17□□□□□ -0.14
SCAMP2-204ENST00000563829 A0A0U1RQJ8 604 aa14.17□□□□□ -0.14
SCAMP2-204ENST00000563829 LRRIQ3A6PVS8 624 aaPredicted RBP14.17□□□□□ -0.14
SCAMP2-204ENST00000563829 RNF40O75150 1001 aa14.17□□□□□ -0.14
SCAMP2-204ENST00000563829 ATP6V1AP38606 617 aa14.17□□□□□ -0.14
SCAMP2-204ENST00000563829 LINC00301Q8NCQ3 95 aa14.17□□□□□ -0.14
SCAMP2-204ENST00000563829 ATRIPQ8WXE1 791 aa14.17□□□□□ -0.14
SCAMP2-204ENST00000563829 CEP89Q96ST8 783 aa14.17□□□□□ -0.14
SCAMP2-204ENST00000563829 GSCP56915 257 aaPredicted RBP14.17□□□□□ -0.14
SCAMP2-204ENST00000563829 KIF4BQ2VIQ3 1234 aa14.17□□□□□ -0.14
SCAMP2-204ENST00000563829 NDUFB9Q9Y6M9 179 aa14.17□□□□□ -0.14
SCAMP2-204ENST00000563829 WASLO00401 505 aaPredicted RBP14.16□□□□□ -0.14
SCAMP2-204ENST00000563829 STX10O60499 249 aa14.16□□□□□ -0.14
SCAMP2-204ENST00000563829 CPP00450 1065 aa14.16□□□□□ -0.14
SCAMP2-204ENST00000563829 USP5P45974 858 aa14.16□□□□□ -0.14
SCAMP2-204ENST00000563829 ATL3Q6DD88 541 aa14.16□□□□□ -0.14
SCAMP2-204ENST00000563829 CLIC6Q96NY7 704 aa14.16□□□□□ -0.14
SCAMP2-204ENST00000563829 A0A1W2PQ27 194 aa14.16□□□□□ -0.14
SCAMP2-204ENST00000563829 A0A1W2PQ64 194 aa14.16□□□□□ -0.14
SCAMP2-204ENST00000563829 A0A1W2PQD8 194 aa14.16□□□□□ -0.14
SCAMP2-204ENST00000563829 SPTLC2O15270 562 aa14.16□□□□□ -0.14
SCAMP2-204ENST00000563829 PFKFB2O60825 505 aa14.16□□□□□ -0.14
SCAMP2-204ENST00000563829 CHST3Q7LGC8 479 aa14.16□□□□□ -0.14
SCAMP2-204ENST00000563829 CEP112Q8N8E3 955 aa14.16□□□□□ -0.14
SCAMP2-204ENST00000563829 AFAP1L1Q8TED9 768 aa14.16□□□□□ -0.14
SCAMP2-204ENST00000563829 C9orf78Q9NZ63 289 aaPredicted RBP14.16□□□□□ -0.14
SCAMP2-204ENST00000563829 RTEL1Q9NZ71 1219 aa14.16□□□□□ -0.14
SCAMP2-204ENST00000563829 RAB21Q9UL25 225 aa14.16□□□□□ -0.14
SCAMP2-204ENST00000563829 CYP21A2P08686 494 aa14.16□□□□□ -0.14
SCAMP2-204ENST00000563829 PFKFB1P16118 471 aa14.16□□□□□ -0.14
SCAMP2-204ENST00000563829 MARCKSP29966 332 aaPredicted RBP14.16□□□□□ -0.14
SCAMP2-204ENST00000563829 TC2NQ8N9U0 490 aa14.16□□□□□ -0.14
SCAMP2-204ENST00000563829 LLPHQ9BRT6 129 aaKnown RBP14.16□□□□□ -0.14
SCAMP2-204ENST00000563829 INTS13Q9NVM9 706 aa14.16□□□□□ -0.14
SCAMP2-204ENST00000563829 DONSONQ9NYP3 566 aa14.16□□□□□ -0.14
SCAMP2-204ENST00000563829 CDC23Q9UJX2 597 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms