RNA–Protein interactions for RNA: ENST00000563554.1

AC009163.3-201, humanhuman

TSL 3 BASIC

Gene AC009163.3, Length 852 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009163.3-201ENST00000563554 USP17L4A6NCW7 530 aa17.31■□□□□ 0.36
AC009163.3-201ENST00000563554 GTF2IP78347 998 aa17.31■□□□□ 0.36
AC009163.3-201ENST00000563554 GORABQ5T7V8 394 aa17.31■□□□□ 0.36
AC009163.3-201ENST00000563554 USP17L1Q7RTZ2 530 aa17.31■□□□□ 0.36
AC009163.3-201ENST00000563554 FBXO33Q7Z6M2 555 aa17.31■□□□□ 0.36
AC009163.3-201ENST00000563554 AACSQ86V21 672 aa17.31■□□□□ 0.36
AC009163.3-201ENST00000563554 CLASRPQ8N2M8 674 aaKnown RBP17.31■□□□□ 0.36
AC009163.3-201ENST00000563554 FOCADQ5VW36 1801 aa17.31■□□□□ 0.36
AC009163.3-201ENST00000563554 PHKA1P46020 1223 aa17.3■□□□□ 0.36
AC009163.3-201ENST00000563554 STRIP1Q5VSL9 837 aa17.3■□□□□ 0.36
AC009163.3-201ENST00000563554 CCDC102BQ68D86 513 aa17.3■□□□□ 0.36
AC009163.3-201ENST00000563554 ZNF784Q8NCA9 323 aaPredicted RBP17.3■□□□□ 0.36
AC009163.3-201ENST00000563554 TDRD7Q8NHU6 1098 aaKnown RBP17.3■□□□□ 0.36
AC009163.3-201ENST00000563554 L3MBTL3Q96JM7 780 aaPredicted RBP17.3■□□□□ 0.36
AC009163.3-201ENST00000563554 DBNDD2Q9BQY9 259 aa17.3■□□□□ 0.36
AC009163.3-201ENST00000563554 RWDD1Q9H446 243 aaPredicted RBP17.3■□□□□ 0.36
AC009163.3-201ENST00000563554 GNL3LQ9NVN8 582 aaKnown RBP17.3■□□□□ 0.36
AC009163.3-201ENST00000563554 JAG2Q9Y219 1238 aa17.3■□□□□ 0.36
AC009163.3-201ENST00000563554 MYO3BQ8WXR4 1341 aa17.29■□□□□ 0.36
AC009163.3-201ENST00000563554 SMARCA5O60264 1052 aaPredicted RBP17.29■□□□□ 0.36
AC009163.3-201ENST00000563554 LMOD1P29536 600 aaPredicted RBP17.29■□□□□ 0.36
AC009163.3-201ENST00000563554 GMPSP49915 693 aaPredicted RBP17.29■□□□□ 0.36
AC009163.3-201ENST00000563554 CHAF1AQ13111 956 aaPredicted RBP17.29■□□□□ 0.36
AC009163.3-201ENST00000563554 TTLL5Q6EMB2 1281 aa17.29■□□□□ 0.36
AC009163.3-201ENST00000563554 EAF2Q96CJ1 260 aaPredicted RBP17.29■□□□□ 0.36
AC009163.3-201ENST00000563554 CCDC8Q9H0W5 538 aaPredicted RBP17.29■□□□□ 0.36
AC009163.3-201ENST00000563554 NMRK2Q9NPI5 230 aa17.29■□□□□ 0.36
AC009163.3-201ENST00000563554 TLR7Q9NYK1 1049 aaKnown RBP17.29■□□□□ 0.36
AC009163.3-201ENST00000563554 DBNLQ9UJU6 430 aaKnown RBP17.29■□□□□ 0.36
AC009163.3-201ENST00000563554 ZBTB12Q9Y330 459 aaPredicted RBP17.29■□□□□ 0.36
AC009163.3-201ENST00000563554 VIL1P09327 827 aaKnown RBP17.28■□□□□ 0.36
AC009163.3-201ENST00000563554 TTC39AQ5SRH9 613 aa17.28■□□□□ 0.36
AC009163.3-201ENST00000563554 DACT2Q5SW24 774 aa17.28■□□□□ 0.36
AC009163.3-201ENST00000563554 RSBN1LQ6PCB5 846 aaPredicted RBP17.28■□□□□ 0.36
AC009163.3-201ENST00000563554 SMC5Q8IY18 1101 aa17.28■□□□□ 0.36
AC009163.3-201ENST00000563554 GCC1Q96CN9 775 aa17.28■□□□□ 0.36
AC009163.3-201ENST00000563554 FAM205AQ6ZU69 1335 aa17.27■□□□□ 0.36
AC009163.3-201ENST00000563554 IQCA1LA6NCM1 817 aa17.27■□□□□ 0.36
AC009163.3-201ENST00000563554 SEMA3EO15041 775 aa17.27■□□□□ 0.36
AC009163.3-201ENST00000563554 IFIT2P09913 472 aaKnown RBP17.27■□□□□ 0.36
AC009163.3-201ENST00000563554 RPS12P25398 132 aaKnown RBP17.27■□□□□ 0.36
AC009163.3-201ENST00000563554 SCNN1DP51172 638 aa17.27■□□□□ 0.36
AC009163.3-201ENST00000563554 CCDC158Q5M9N0 1113 aa17.27■□□□□ 0.36
AC009163.3-201ENST00000563554 MXD3Q9BW11 206 aa17.27■□□□□ 0.36
AC009163.3-201ENST00000563554 RRAGCQ9HB90 399 aa17.27■□□□□ 0.36
AC009163.3-201ENST00000563554 ZBTB47Q9UFB7 747 aaPredicted RBP17.27■□□□□ 0.36
AC009163.3-201ENST00000563554 HACL1Q9UJ83 578 aa17.27■□□□□ 0.36
AC009163.3-201ENST00000563554 SALL3Q9BXA9 1300 aa17.26■□□□□ 0.35
AC009163.3-201ENST00000563554 ARID4AP29374 1257 aaPredicted RBP17.26■□□□□ 0.35
AC009163.3-201ENST00000563554 AGBL3Q8NEM8 1001 aa17.26■□□□□ 0.35
AC009163.3-201ENST00000563554 GPRC5DQ9NZD1 345 aa17.26■□□□□ 0.35
AC009163.3-201ENST00000563554 UQCRFS1P1P0C7P4 283 aa17.25■□□□□ 0.35
AC009163.3-201ENST00000563554 RASGRF1Q13972 1273 aa17.25■□□□□ 0.35
AC009163.3-201ENST00000563554 MFSD14BQ5SR56 506 aa17.25■□□□□ 0.35
AC009163.3-201ENST00000563554 MICALL2Q8IY33 904 aa17.25■□□□□ 0.35
AC009163.3-201ENST00000563554 DENND2AQ9ULE3 1009 aa17.25■□□□□ 0.35
AC009163.3-201ENST00000563554 VEGFAP15692 232 aaPredicted RBP17.24■□□□□ 0.35
AC009163.3-201ENST00000563554 FKBP1AP62942 108 aaKnown RBP17.24■□□□□ 0.35
AC009163.3-201ENST00000563554 SKAP1Q86WV1 359 aa17.24■□□□□ 0.35
AC009163.3-201ENST00000563554 CERS5Q8N5B7 392 aa17.24■□□□□ 0.35
AC009163.3-201ENST00000563554 OTUD7AQ8TE49 926 aaPredicted RBP17.24■□□□□ 0.35
AC009163.3-201ENST00000563554 TBC1D22AQ8WUA7 517 aa17.24■□□□□ 0.35
AC009163.3-201ENST00000563554 PDS5AQ29RF7 1337 aaKnown RBP17.23■□□□□ 0.35
AC009163.3-201ENST00000563554 SHTN1A0MZ66 631 aa17.23■□□□□ 0.35
AC009163.3-201ENST00000563554 POTECB2RU33 542 aa17.23■□□□□ 0.35
AC009163.3-201ENST00000563554 EPHX2P34913 555 aa17.23■□□□□ 0.35
AC009163.3-201ENST00000563554 EPS15P42566 896 aa17.23■□□□□ 0.35
AC009163.3-201ENST00000563554 ANKRD45Q5TZF3 282 aa17.23■□□□□ 0.35
AC009163.3-201ENST00000563554 KIAA0825Q8IV33 1275 aa17.23■□□□□ 0.35
AC009163.3-201ENST00000563554 C16orf71Q8IYS4 520 aaPredicted RBP17.23■□□□□ 0.35
AC009163.3-201ENST00000563554 WDR66Q8TBY9 1149 aa17.23■□□□□ 0.35
AC009163.3-201ENST00000563554 DPF2Q92785 391 aa17.23■□□□□ 0.35
AC009163.3-201ENST00000563554 CNOT7Q9UIV1 285 aaKnown RBP17.23■□□□□ 0.35
AC009163.3-201ENST00000563554 MYH1P12882 1939 aa17.23■□□□□ 0.35
AC009163.3-201ENST00000563554 NAV1Q8NEY1 1877 aa17.22■□□□□ 0.35
AC009163.3-201ENST00000563554 MYH8P13535 1937 aa17.22■□□□□ 0.35
AC009163.3-201ENST00000563554 F8W031 263 aaPredicted RBP17.22■□□□□ 0.35
AC009163.3-201ENST00000563554 H7C1D1 291 aa17.22■□□□□ 0.35
AC009163.3-201ENST00000563554 USP17L8P0C7I0 530 aa17.22■□□□□ 0.35
AC009163.3-201ENST00000563554 MCAMP43121 646 aa17.22■□□□□ 0.35
AC009163.3-201ENST00000563554 SCARF1Q14162 830 aa17.22■□□□□ 0.35
AC009163.3-201ENST00000563554 B4GALNT3Q6L9W6 998 aa17.22■□□□□ 0.35
AC009163.3-201ENST00000563554 PI16Q6UXB8 463 aa17.22■□□□□ 0.35
AC009163.3-201ENST00000563554 SPATA5Q8NB90 893 aa17.22■□□□□ 0.35
AC009163.3-201ENST00000563554 GMLQ99445 158 aa17.22■□□□□ 0.35
AC009163.3-201ENST00000563554 TAF1DQ9H5J8 278 aaPredicted RBP17.22■□□□□ 0.35
AC009163.3-201ENST00000563554 ADARB2Q9NS39 739 aaKnown RBP17.22■□□□□ 0.35
AC009163.3-201ENST00000563554 HMG20BQ9P0W2 317 aa17.22■□□□□ 0.35
AC009163.3-201ENST00000563554 ZBTB22O15209 634 aa17.21■□□□□ 0.35
AC009163.3-201ENST00000563554 PDE4AP27815 886 aa17.21■□□□□ 0.35
AC009163.3-201ENST00000563554 EAPPQ56P03 285 aaPredicted RBP17.21■□□□□ 0.35
AC009163.3-201ENST00000563554 OGFOD1Q8N543 542 aa17.21■□□□□ 0.35
AC009163.3-201ENST00000563554 GPATCH3Q96I76 525 aa17.21■□□□□ 0.35
AC009163.3-201ENST00000563554 HDAC9Q9UKV0 1011 aa17.21■□□□□ 0.35
AC009163.3-201ENST00000563554 SALL1Q9NSC2 1324 aa17.21■□□□□ 0.34
AC009163.3-201ENST00000563554 KIF3CO14782 793 aa17.2■□□□□ 0.34
AC009163.3-201ENST00000563554 ZGPATQ8N5A5 531 aaKnown RBP17.2■□□□□ 0.34
AC009163.3-201ENST00000563554 ZNF512BQ96KM6 892 aaPredicted RBP17.2■□□□□ 0.34
AC009163.3-201ENST00000563554 SNRKQ9NRH2 765 aa17.2■□□□□ 0.34
AC009163.3-201ENST00000563554 TTF2Q9UNY4 1162 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms