RNA–Protein interactions for RNA: ENST00000563297.5

CLK3-211, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-211ENST00000563297 APOBEC3FQ8IUX4 373 aaKnown RBP19.92■□□□□ 0.78
CLK3-211ENST00000563297 MTMR14Q8NCE2 650 aa19.92■□□□□ 0.78
CLK3-211ENST00000563297 SUCLG2Q96I99 432 aa19.92■□□□□ 0.78
CLK3-211ENST00000563297 A0A1B0GUL6 1792 aa19.92■□□□□ 0.78
CLK3-211ENST00000563297 NBPF7P0C2Y1 421 aaPredicted RBP19.91■□□□□ 0.78
CLK3-211ENST00000563297 FKBP1AP62942 108 aaKnown RBP19.91■□□□□ 0.78
CLK3-211ENST00000563297 PCDHAC2Q9Y5I4 1007 aa19.91■□□□□ 0.78
CLK3-211ENST00000563297 RGS19P49795 217 aa19.9■□□□□ 0.78
CLK3-211ENST00000563297 MRPL50Q8N5N7 158 aaKnown RBP19.9■□□□□ 0.78
CLK3-211ENST00000563297 PUS3Q9BZE2 481 aaKnown RBP19.9■□□□□ 0.78
CLK3-211ENST00000563297 UTYO14607 1347 aa19.9■□□□□ 0.78
CLK3-211ENST00000563297 F8W031 263 aaPredicted RBP19.89■□□□□ 0.77
CLK3-211ENST00000563297 PTPN12Q05209 780 aaKnown RBP19.89■□□□□ 0.77
CLK3-211ENST00000563297 PRKG1Q13976 671 aa19.89■□□□□ 0.77
CLK3-211ENST00000563297 UBE4AQ14139 1066 aa19.89■□□□□ 0.77
CLK3-211ENST00000563297 ARMC9Q7Z3E5 817 aa19.89■□□□□ 0.77
CLK3-211ENST00000563297 DEFB129Q9H1M3 183 aa19.89■□□□□ 0.77
CLK3-211ENST00000563297 JAG2Q9Y219 1238 aa19.89■□□□□ 0.77
CLK3-211ENST00000563297 TM4SF4P48230 202 aa19.88■□□□□ 0.77
CLK3-211ENST00000563297 CFAP100Q494V2 611 aa19.88■□□□□ 0.77
CLK3-211ENST00000563297 LDLRAD1Q5T700 205 aa19.88■□□□□ 0.77
CLK3-211ENST00000563297 FAM84BQ96KN1 310 aaPredicted RBP19.88■□□□□ 0.77
CLK3-211ENST00000563297 PRMT6Q96LA8 375 aaPredicted RBP19.88■□□□□ 0.77
CLK3-211ENST00000563297 RIPOR2Q9Y4F9 1068 aa19.88■□□□□ 0.77
CLK3-211ENST00000563297 FAM205AQ6ZU69 1335 aa19.87■□□□□ 0.77
CLK3-211ENST00000563297 TDRD7Q8NHU6 1098 aaKnown RBP19.87■□□□□ 0.77
CLK3-211ENST00000563297 SPDYE2BA6NHP3 402 aa19.86■□□□□ 0.77
CLK3-211ENST00000563297 SPDYE6P0CI01 402 aa19.86■□□□□ 0.77
CLK3-211ENST00000563297 HIBADHP31937 336 aaKnown RBP19.86■□□□□ 0.77
CLK3-211ENST00000563297 GYG1P46976 350 aa19.86■□□□□ 0.77
CLK3-211ENST00000563297 RABL6Q3YEC7 729 aaPredicted RBP19.86■□□□□ 0.77
CLK3-211ENST00000563297 BICC1Q9H694 974 aaKnown RBP19.86■□□□□ 0.77
CLK3-211ENST00000563297 ANGEL1Q9UNK9 670 aaKnown RBP19.86■□□□□ 0.77
CLK3-211ENST00000563297 FZD1Q9UP38 647 aa19.86■□□□□ 0.77
CLK3-211ENST00000563297 E9PSI1 815 aa19.85■□□□□ 0.77
CLK3-211ENST00000563297 TBC1D8O95759 1140 aa19.85■□□□□ 0.77
CLK3-211ENST00000563297 MKRN3Q13064 507 aaKnown RBP19.85■□□□□ 0.77
CLK3-211ENST00000563297 SSH1Q8WYL5 1049 aa19.85■□□□□ 0.77
CLK3-211ENST00000563297 AOX1Q06278 1338 aa19.84■□□□□ 0.77
CLK3-211ENST00000563297 ECM29Q5VYK3 1845 aa19.84■□□□□ 0.77
CLK3-211ENST00000563297 CLRN2A0PK11 232 aa19.84■□□□□ 0.77
CLK3-211ENST00000563297 MYO1BO43795 1136 aa19.84■□□□□ 0.77
CLK3-211ENST00000563297 MLLT1Q03111 559 aaPredicted RBP19.84■□□□□ 0.77
CLK3-211ENST00000563297 SLFN5Q08AF3 891 aa19.84■□□□□ 0.77
CLK3-211ENST00000563297 ANKRD44Q8N8A2 993 aa19.84■□□□□ 0.77
CLK3-211ENST00000563297 PPP2R3BQ9Y5P8 575 aa19.84■□□□□ 0.77
CLK3-211ENST00000563297 COL1A1P02452 1464 aaPredicted RBP19.84■□□□□ 0.77
CLK3-211ENST00000563297 PTPRCP08575 1304 aa19.83■□□□□ 0.77
CLK3-211ENST00000563297 MROH5Q6ZUA9 1318 aa19.83■□□□□ 0.77
CLK3-211ENST00000563297 MAP3K11Q16584 847 aa19.83■□□□□ 0.77
CLK3-211ENST00000563297 LRRC24Q50LG9 513 aa19.83■□□□□ 0.77
CLK3-211ENST00000563297 MFSD14BQ5SR56 506 aa19.83■□□□□ 0.77
CLK3-211ENST00000563297 SPRYD7Q5W111 196 aa19.83■□□□□ 0.77
CLK3-211ENST00000563297 USP44Q9H0E7 712 aa19.83■□□□□ 0.77
CLK3-211ENST00000563297 RBM5P52756 815 aaKnown RBP eCLIP19.82■□□□□ 0.76
CLK3-211ENST00000563297 FBXO33Q7Z6M2 555 aa19.82■□□□□ 0.76
CLK3-211ENST00000563297 CTU1Q7Z7A3 348 aaKnown RBP19.82■□□□□ 0.76
CLK3-211ENST00000563297 SLC10A4Q96EP9 437 aa19.82■□□□□ 0.76
CLK3-211ENST00000563297 VEZTQ9HBM0 779 aa19.82■□□□□ 0.76
CLK3-211ENST00000563297 PPP1R12BO60237 982 aaPredicted RBP19.81■□□□□ 0.76
CLK3-211ENST00000563297 SREBF2Q12772 1141 aa19.81■□□□□ 0.76
CLK3-211ENST00000563297 SUPT20HL1Q3ZLR7 823 aa19.81■□□□□ 0.76
CLK3-211ENST00000563297 NBPF12Q5TAG4 269 aaPredicted RBP19.81■□□□□ 0.76
CLK3-211ENST00000563297 ZNF296Q8WUU4 475 aaPredicted RBP19.81■□□□□ 0.76
CLK3-211ENST00000563297 TTF2Q9UNY4 1162 aaKnown RBP19.81■□□□□ 0.76
CLK3-211ENST00000563297 SSC5DA1L4H1 1573 aa19.8■□□□□ 0.76
CLK3-211ENST00000563297 RASA3Q14644 834 aa19.8■□□□□ 0.76
CLK3-211ENST00000563297 CDCA7LQ96GN5 454 aa19.8■□□□□ 0.76
CLK3-211ENST00000563297 SERPINA10Q9UK55 444 aa19.8■□□□□ 0.76
CLK3-211ENST00000563297 USP2O75604 605 aaPredicted RBP19.79■□□□□ 0.76
CLK3-211ENST00000563297 PDE8BO95263 885 aa19.79■□□□□ 0.76
CLK3-211ENST00000563297 NOM1Q5C9Z4 860 aaKnown RBP19.79■□□□□ 0.76
CLK3-211ENST00000563297 METTL24Q5JXM2 366 aa19.79■□□□□ 0.76
CLK3-211ENST00000563297 VGLL2Q8N8G2 317 aa19.79■□□□□ 0.76
CLK3-211ENST00000563297 KLHDC4Q8TBB5 520 aa19.79■□□□□ 0.76
CLK3-211ENST00000563297 CLMNQ96JQ2 1002 aa19.79■□□□□ 0.76
CLK3-211ENST00000563297 TDRD3Q9H7E2 651 aaKnown RBP19.79■□□□□ 0.76
CLK3-211ENST00000563297 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.79■□□□□ 0.76
CLK3-211ENST00000563297 ZNF70Q9UC06 446 aaPredicted RBP19.79■□□□□ 0.76
CLK3-211ENST00000563297 IQSEC3Q9UPP2 1182 aaPredicted RBP19.79■□□□□ 0.76
CLK3-211ENST00000563297 UNCXA6NJT0 531 aa19.78■□□□□ 0.76
CLK3-211ENST00000563297 GPR25O00155 361 aa19.78■□□□□ 0.76
CLK3-211ENST00000563297 GRIK5Q16478 980 aa19.78■□□□□ 0.76
CLK3-211ENST00000563297 ALDH1L2Q3SY69 923 aa19.78■□□□□ 0.76
CLK3-211ENST00000563297 SPDYE2Q495Y8 402 aa19.78■□□□□ 0.76
CLK3-211ENST00000563297 VPS37DQ86XT2 251 aa19.78■□□□□ 0.76
CLK3-211ENST00000563297 DZIP1LQ8IYY4 767 aaKnown RBP19.78■□□□□ 0.76
CLK3-211ENST00000563297 CFHR5Q9BXR6 569 aa19.78■□□□□ 0.76
CLK3-211ENST00000563297 R3HDMLQ9H3Y0 253 aa19.78■□□□□ 0.76
CLK3-211ENST00000563297 MANSC4A6NHS7 340 aaPredicted RBP19.77■□□□□ 0.76
CLK3-211ENST00000563297 INHBEP58166 350 aa19.77■□□□□ 0.76
CLK3-211ENST00000563297 CAVIN4Q5BKX8 364 aa19.77■□□□□ 0.76
CLK3-211ENST00000563297 TRMT2AQ8IZ69 625 aaKnown RBP19.77■□□□□ 0.76
CLK3-211ENST00000563297 ZBTB48P10074 688 aaPredicted RBP19.76■□□□□ 0.75
CLK3-211ENST00000563297 CRKP46108 304 aa19.76■□□□□ 0.75
CLK3-211ENST00000563297 PKN2Q16513 984 aaKnown RBP19.76■□□□□ 0.75
CLK3-211ENST00000563297 WNK4Q96J92 1243 aa19.76■□□□□ 0.75
CLK3-211ENST00000563297 FRAT2O75474 233 aaPredicted RBP19.75■□□□□ 0.75
CLK3-211ENST00000563297 ALDH1A1P00352 501 aa19.75■□□□□ 0.75
CLK3-211ENST00000563297 IREB2P48200 963 aaKnown RBP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms