RNA–Protein interactions for RNA: ENST00000562710.1

LINC00565-201, long intergenic non-protein coding RNA 565, humanhuman

BASIC

Gene LINC00565, Length 2,331 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00565-201ENST00000562710 FOXP2O15409 715 aa25.4■■□□□ 1.66
LINC00565-201ENST00000562710 ERCC4Q92889 916 aaPredicted RBP25.4■■□□□ 1.66
LINC00565-201ENST00000562710 NAT10Q9H0A0 1025 aaKnown RBP25.4■■□□□ 1.66
LINC00565-201ENST00000562710 NCBP1Q09161 790 aaKnown RBP25.39■■□□□ 1.66
LINC00565-201ENST00000562710 IMMTQ16891 758 aaKnown RBP25.39■■□□□ 1.66
LINC00565-201ENST00000562710 CCDC158Q5M9N0 1113 aa25.39■■□□□ 1.66
LINC00565-201ENST00000562710 LINC00301Q8NCQ3 95 aa25.39■■□□□ 1.66
LINC00565-201ENST00000562710 TNS3Q68CZ2 1445 aa25.39■■□□□ 1.65
LINC00565-201ENST00000562710 CBX1P83916 185 aa25.38■■□□□ 1.65
LINC00565-201ENST00000562710 AOPEPQ8N6M6 819 aa25.38■■□□□ 1.65
LINC00565-201ENST00000562710 SDF4Q9BRK5 362 aa25.38■■□□□ 1.65
LINC00565-201ENST00000562710 PRDM4Q9UKN5 801 aa25.38■■□□□ 1.65
LINC00565-201ENST00000562710 A0A1B0GVL5 298 aa25.38■■□□□ 1.65
LINC00565-201ENST00000562710 ZFYP08048 801 aaPredicted RBP25.38■■□□□ 1.65
LINC00565-201ENST00000562710 HAND2P61296 217 aa25.38■■□□□ 1.65
LINC00565-201ENST00000562710 CCDC112Q8NEF3 446 aa25.38■■□□□ 1.65
LINC00565-201ENST00000562710 PRDM10Q9NQV6 1147 aa25.38■■□□□ 1.65
LINC00565-201ENST00000562710 SKILP12757 684 aa25.37■■□□□ 1.65
LINC00565-201ENST00000562710 WASHC4Q2M389 1173 aa25.37■■□□□ 1.65
LINC00565-201ENST00000562710 TTC39AQ5SRH9 613 aa25.37■■□□□ 1.65
LINC00565-201ENST00000562710 OTUD7BQ6GQQ9 843 aa25.37■■□□□ 1.65
LINC00565-201ENST00000562710 C8orf76Q96K31 380 aa25.37■■□□□ 1.65
LINC00565-201ENST00000562710 DHX16O60231 1041 aaKnown RBP25.37■■□□□ 1.65
LINC00565-201ENST00000562710 NDUFA8P51970 172 aa25.37■■□□□ 1.65
LINC00565-201ENST00000562710 CCDC57Q2TAC2 916 aa25.37■■□□□ 1.65
LINC00565-201ENST00000562710 GORABQ5T7V8 394 aa25.37■■□□□ 1.65
LINC00565-201ENST00000562710 CEP135Q66GS9 1140 aa25.37■■□□□ 1.65
LINC00565-201ENST00000562710 CLIC4Q9Y696 253 aa25.37■■□□□ 1.65
LINC00565-201ENST00000562710 PCDH11XQ9BZA7 1347 aa25.37■■□□□ 1.65
LINC00565-201ENST00000562710 PCDH11YQ9BZA8 1340 aa25.37■■□□□ 1.65
LINC00565-201ENST00000562710 CPDO75976 1380 aa25.36■■□□□ 1.65
LINC00565-201ENST00000562710 KCPQ6ZWJ8 1503 aa25.36■■□□□ 1.65
LINC00565-201ENST00000562710 CCDC69A6NI79 296 aa25.36■■□□□ 1.65
LINC00565-201ENST00000562710 PRC1O43663 620 aa25.36■■□□□ 1.65
LINC00565-201ENST00000562710 FGAP02671 866 aa25.36■■□□□ 1.65
LINC00565-201ENST00000562710 ADORA1P30542 326 aa25.36■■□□□ 1.65
LINC00565-201ENST00000562710 STK38Q15208 465 aa25.36■■□□□ 1.65
LINC00565-201ENST00000562710 FILIP1Q7Z7B0 1213 aa25.36■■□□□ 1.65
LINC00565-201ENST00000562710 KCNG4Q8TDN1 519 aa25.36■■□□□ 1.65
LINC00565-201ENST00000562710 XAGE2Q96GT9 111 aa25.36■■□□□ 1.65
LINC00565-201ENST00000562710 ERVV-2B6SEH9 535 aa25.36■■□□□ 1.65
LINC00565-201ENST00000562710 SF3A1Q15459 793 aaKnown RBP25.36■■□□□ 1.65
LINC00565-201ENST00000562710 MB21D2Q8IYB1 491 aaPredicted RBP25.36■■□□□ 1.65
LINC00565-201ENST00000562710 FBXO18Q8NFZ0 1043 aa25.36■■□□□ 1.65
LINC00565-201ENST00000562710 POLR3EQ9NVU0 708 aa25.36■■□□□ 1.65
LINC00565-201ENST00000562710 AKAP2Q9Y2D5 859 aa25.36■■□□□ 1.65
LINC00565-201ENST00000562710 KLF18A0A0U1RQI7 1052 aa25.35■■□□□ 1.65
LINC00565-201ENST00000562710 USP27XA6NNY8 438 aa25.35■■□□□ 1.65
LINC00565-201ENST00000562710 YEATS4O95619 227 aa25.35■■□□□ 1.65
LINC00565-201ENST00000562710 CCZ1BP86790 482 aa25.35■■□□□ 1.65
LINC00565-201ENST00000562710 CCZ1P86791 482 aaPredicted RBP25.35■■□□□ 1.65
LINC00565-201ENST00000562710 KIAA1468Q9P260 1216 aa25.35■■□□□ 1.65
LINC00565-201ENST00000562710 HPS5Q9UPZ3 1129 aa25.35■■□□□ 1.65
LINC00565-201ENST00000562710 POLR3DP05423 398 aaPredicted RBP25.35■■□□□ 1.65
LINC00565-201ENST00000562710 ZCRB1Q8TBF4 217 aaKnown RBP25.35■■□□□ 1.65
LINC00565-201ENST00000562710 FBXW7Q969H0 707 aa25.35■■□□□ 1.65
LINC00565-201ENST00000562710 FBXO3Q9UK99 471 aa25.35■■□□□ 1.65
LINC00565-201ENST00000562710 GOLGA8BA8MQT2 603 aa25.34■■□□□ 1.65
LINC00565-201ENST00000562710 ORC3Q9UBD5 711 aaPredicted RBP25.34■■□□□ 1.65
LINC00565-201ENST00000562710 U2AF2P26368 475 aaKnown RBP eCLIP25.34■■□□□ 1.65
LINC00565-201ENST00000562710 NYAP1Q6ZVC0 841 aa25.34■■□□□ 1.65
LINC00565-201ENST00000562710 BRAPQ7Z569 592 aa25.34■■□□□ 1.65
LINC00565-201ENST00000562710 ISCA1Q9BUE6 129 aa25.34■■□□□ 1.65
LINC00565-201ENST00000562710 SPTLC2O15270 562 aa25.33■■□□□ 1.65
LINC00565-201ENST00000562710 ZSCAN20P17040 1043 aaPredicted RBP25.33■■□□□ 1.65
LINC00565-201ENST00000562710 SCARF1Q14162 830 aa25.33■■□□□ 1.65
LINC00565-201ENST00000562710 MYSM1Q5VVJ2 828 aa25.33■■□□□ 1.65
LINC00565-201ENST00000562710 APPBP2Q92624 585 aa25.33■■□□□ 1.65
LINC00565-201ENST00000562710 DDX60Q8IY21 1712 aaKnown RBP25.33■■□□□ 1.65
LINC00565-201ENST00000562710 ANTXR2P58335 489 aa25.32■■□□□ 1.64
LINC00565-201ENST00000562710 PTPN14Q15678 1187 aa25.32■■□□□ 1.64
LINC00565-201ENST00000562710 NCOA7Q8NI08 942 aa25.32■■□□□ 1.64
LINC00565-201ENST00000562710 ZNF592Q92610 1267 aa25.32■■□□□ 1.64
LINC00565-201ENST00000562710 PUS7LQ9H0K6 701 aaKnown RBP25.32■■□□□ 1.64
LINC00565-201ENST00000562710 BPIFA3Q9BQP9 254 aa25.32■■□□□ 1.64
LINC00565-201ENST00000562710 NEDD4P46934 1319 aa25.32■■□□□ 1.64
LINC00565-201ENST00000562710 SPATA31A3Q5VYP0 1347 aa25.32■■□□□ 1.64
LINC00565-201ENST00000562710 DCCP43146 1447 aa25.32■■□□□ 1.64
LINC00565-201ENST00000562710 PAPPAQ13219 1627 aa25.32■■□□□ 1.64
LINC00565-201ENST00000562710 CPLX1O14810 134 aa25.31■■□□□ 1.64
LINC00565-201ENST00000562710 ZAP70P43403 619 aa25.31■■□□□ 1.64
LINC00565-201ENST00000562710 GSDMDP57764 484 aa25.31■■□□□ 1.64
LINC00565-201ENST00000562710 ZRSR1Q15695 479 aaKnown RBP25.31■■□□□ 1.64
LINC00565-201ENST00000562710 DPCR1Q3MIW9 517 aa25.31■■□□□ 1.64
LINC00565-201ENST00000562710 NBPF11Q86T75 865 aa25.31■■□□□ 1.64
LINC00565-201ENST00000562710 SPDYE4A6NLX3 237 aa25.31■■□□□ 1.64
LINC00565-201ENST00000562710 RALYLQ86SE5 291 aaKnown RBP25.31■■□□□ 1.64
LINC00565-201ENST00000562710 MYH7P12883 1935 aa25.31■■□□□ 1.64
LINC00565-201ENST00000562710 TCIRG1Q13488 830 aa25.3■■□□□ 1.64
LINC00565-201ENST00000562710 HSP90AB3PQ58FF7 597 aa25.3■■□□□ 1.64
LINC00565-201ENST00000562710 OSBPL5Q9H0X9 879 aaPredicted RBP25.3■■□□□ 1.64
LINC00565-201ENST00000562710 GJB4Q9NTQ9 266 aa25.3■■□□□ 1.64
LINC00565-201ENST00000562710 ZNF213O14771 459 aa25.3■■□□□ 1.64
LINC00565-201ENST00000562710 DMTNQ08495 405 aa25.3■■□□□ 1.64
LINC00565-201ENST00000562710 SYNE3Q6ZMZ3 975 aa25.3■■□□□ 1.64
LINC00565-201ENST00000562710 RAB11FIP4Q86YS3 637 aa25.3■■□□□ 1.64
LINC00565-201ENST00000562710 KCND1Q9NSA2 647 aa25.3■■□□□ 1.64
LINC00565-201ENST00000562710 IMPACTQ9P2X3 320 aa25.3■■□□□ 1.64
LINC00565-201ENST00000562710 CCAR2Q8N163 923 aaKnown RBP25.29■■□□□ 1.64
LINC00565-201ENST00000562710 FEZ1Q99689 392 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms