RNA–Protein interactions for RNA: ENST00000561071.5

MARK3-223, Transcript of microtubule affinity regulating kinase 3, human

TSL 3

Gene MARK3, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-223	ENST00000561071	SAMD5	Q5TGI4	173 aa		10.31	□□□□□ -0.76
MARK3-223	ENST00000561071	IER5	Q5VY09	327 aa		10.31	□□□□□ -0.76
MARK3-223	ENST00000561071	FIGNL1	Q6PIW4	674 aa		10.31	□□□□□ -0.76
MARK3-223	ENST00000561071	GLYCTK	Q8IVS8	523 aa		10.31	□□□□□ -0.76
MARK3-223	ENST00000561071	GPR161	Q8N6U8	529 aa	Known RBP	10.31	□□□□□ -0.76
MARK3-223	ENST00000561071	ABHD17A	Q96GS6	310 aa		10.31	□□□□□ -0.76
MARK3-223	ENST00000561071	CEP63	Q96MT8	703 aa		10.31	□□□□□ -0.76
MARK3-223	ENST00000561071	C14orf93	Q9H972	538 aa	Known RBP	10.31	□□□□□ -0.76
MARK3-223	ENST00000561071	HCN2	Q9UL51	889 aa		10.31	□□□□□ -0.76
MARK3-223	ENST00000561071	PCDHGC4	Q9Y5F7	938 aa		10.31	□□□□□ -0.76
MARK3-223	ENST00000561071	PIK3C2G	O75747	1445 aa		10.31	□□□□□ -0.76
MARK3-223	ENST00000561071	ERBB4	Q15303	1308 aa		10.31	□□□□□ -0.76
MARK3-223	ENST00000561071	IFT172	Q9UG01	1749 aa		10.3	□□□□□ -0.76
MARK3-223	ENST00000561071	KHNYN	O15037	678 aa	Known RBP	10.3	□□□□□ -0.76
MARK3-223	ENST00000561071	ATCAY	Q86WG3	371 aa		10.3	□□□□□ -0.76
MARK3-223	ENST00000561071	NDFIP2	Q9NV92	336 aa		10.3	□□□□□ -0.76
MARK3-223	ENST00000561071	YTHDC2	Q9H6S0	1430 aa	Known RBP	10.3	□□□□□ -0.76
MARK3-223	ENST00000561071	NPR3	P17342	541 aa		10.29	□□□□□ -0.76
MARK3-223	ENST00000561071	EIF1AX	P47813	144 aa	Known RBP	10.29	□□□□□ -0.76
MARK3-223	ENST00000561071	TNP2	Q05952	138 aa		10.29	□□□□□ -0.76
MARK3-223	ENST00000561071	NFX1	Q12986	1120 aa	Known RBP	10.29	□□□□□ -0.76
MARK3-223	ENST00000561071	ABTB2	Q8N961	1025 aa		10.29	□□□□□ -0.76
MARK3-223	ENST00000561071	ZNF775	Q96BV0	537 aa	Predicted RBP	10.29	□□□□□ -0.76
MARK3-223	ENST00000561071	BRD7	Q9NPI1	651 aa		10.29	□□□□□ -0.76
MARK3-223	ENST00000561071	USP20	Q9Y2K6	914 aa		10.29	□□□□□ -0.76
MARK3-223	ENST00000561071	TECPR2	O15040	1411 aa		10.29	□□□□□ -0.76
MARK3-223	ENST00000561071	OPLAH	O14841	1288 aa		10.28	□□□□□ -0.76
MARK3-223	ENST00000561071	FAM13A	O94988	1023 aa		10.28	□□□□□ -0.76
MARK3-223	ENST00000561071	FAM157B	P0CG42	384 aa		10.28	□□□□□ -0.76
MARK3-223	ENST00000561071	MAPT	P10636	758 aa	Known RBP	10.28	□□□□□ -0.76
MARK3-223	ENST00000561071	INPP5B	P32019	993 aa		10.28	□□□□□ -0.76
MARK3-223	ENST00000561071	ZAP70	P43403	619 aa		10.28	□□□□□ -0.76
MARK3-223	ENST00000561071	NOM1	Q5C9Z4	860 aa	Known RBP	10.28	□□□□□ -0.76
MARK3-223	ENST00000561071	PRAM1	Q96QH2	718 aa		10.28	□□□□□ -0.76
MARK3-223	ENST00000561071	GZF1	Q9H116	711 aa	Predicted RBP	10.28	□□□□□ -0.76
MARK3-223	ENST00000561071	STRN4	Q9NRL3	753 aa		10.28	□□□□□ -0.76
MARK3-223	ENST00000561071	CDC42BPG	Q6DT37	1551 aa		10.27	□□□□□ -0.76
MARK3-223	ENST00000561071	LAMC1	P11047	1609 aa		10.27	□□□□□ -0.77
MARK3-223	ENST00000561071	ZBTB7C	A1YPR0	619 aa		10.27	□□□□□ -0.77
MARK3-223	ENST00000561071	EFS	O43281	561 aa		10.27	□□□□□ -0.77
MARK3-223	ENST00000561071	GRN	P28799	593 aa	Known RBP	10.27	□□□□□ -0.77
MARK3-223	ENST00000561071	SFSWAP	Q12872	951 aa	Known RBP	10.27	□□□□□ -0.77
MARK3-223	ENST00000561071	LCE2C	Q5TA81	110 aa		10.27	□□□□□ -0.77
MARK3-223	ENST00000561071	SLC16A10	Q8TF71	515 aa		10.27	□□□□□ -0.77
MARK3-223	ENST00000561071	BIN2	Q9UBW5	565 aa	Predicted RBP	10.27	□□□□□ -0.77
MARK3-223	ENST00000561071	NPHP3	Q7Z494	1330 aa		10.27	□□□□□ -0.77
MARK3-223	ENST00000561071	DHX57	Q6P158	1386 aa	Known RBP	10.26	□□□□□ -0.77
MARK3-223	ENST00000561071	PXDN	Q92626	1479 aa		10.26	□□□□□ -0.77
MARK3-223	ENST00000561071	NRXN1	Q9ULB1	1477 aa		10.26	□□□□□ -0.77
MARK3-223	ENST00000561071	VSIG8	P0DPA2	414 aa		10.26	□□□□□ -0.77
MARK3-223	ENST00000561071	RBM6	P78332	1123 aa	Known RBP	10.26	□□□□□ -0.77
MARK3-223	ENST00000561071	ARHGAP4	P98171	946 aa		10.26	□□□□□ -0.77
MARK3-223	ENST00000561071	GRIN2C	Q14957	1233 aa		10.26	□□□□□ -0.77
MARK3-223	ENST00000561071	FOXR1	Q6PIV2	292 aa		10.26	□□□□□ -0.77
MARK3-223	ENST00000561071	DCAF11	Q8TEB1	546 aa		10.26	□□□□□ -0.77
MARK3-223	ENST00000561071	TRERF1	Q96PN7	1200 aa		10.26	□□□□□ -0.77
MARK3-223	ENST00000561071	USP21	Q9UK80	565 aa		10.26	□□□□□ -0.77
MARK3-223	ENST00000561071	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	10.26	□□□□□ -0.77
MARK3-223	ENST00000561071	CD33	P20138	364 aa		10.25	□□□□□ -0.77
MARK3-223	ENST00000561071	ARSD	P51689	593 aa		10.25	□□□□□ -0.77
MARK3-223	ENST00000561071	GAS6	Q14393	721 aa		10.25	□□□□□ -0.77
MARK3-223	ENST00000561071	KRT28	Q7Z3Y7	464 aa		10.25	□□□□□ -0.77
MARK3-223	ENST00000561071	RGL4	Q8IZJ4	473 aa		10.25	□□□□□ -0.77
MARK3-223	ENST00000561071	GPR152	Q8TDT2	470 aa		10.25	□□□□□ -0.77
MARK3-223	ENST00000561071	HIRIP3	Q9BW71	556 aa	Predicted RBP	10.25	□□□□□ -0.77
MARK3-223	ENST00000561071	CFHR5	Q9BXR6	569 aa		10.25	□□□□□ -0.77
MARK3-223	ENST00000561071	POGK	Q9P215	609 aa		10.25	□□□□□ -0.77
MARK3-223	ENST00000561071	TRAK1	Q9UPV9	953 aa		10.25	□□□□□ -0.77
MARK3-223	ENST00000561071	FGFR3	P22607	806 aa		10.24	□□□□□ -0.77
MARK3-223	ENST00000561071	AAMP	Q13685	434 aa		10.24	□□□□□ -0.77
MARK3-223	ENST00000561071	IRF7	Q92985	503 aa		10.24	□□□□□ -0.77
MARK3-223	ENST00000561071	PHF24	Q9UPV7	400 aa		10.24	□□□□□ -0.77
MARK3-223	ENST00000561071	RGS12	O14924	1447 aa		10.24	□□□□□ -0.77
MARK3-223	ENST00000561071	MYOM2	P54296	1465 aa		10.23	□□□□□ -0.77
MARK3-223	ENST00000561071	CTBS	Q01459	385 aa		10.23	□□□□□ -0.77
MARK3-223	ENST00000561071	RNFT1	Q5M7Z0	435 aa		10.23	□□□□□ -0.77
MARK3-223	ENST00000561071	PMFBP1	Q8TBY8	1022 aa		10.23	□□□□□ -0.77
MARK3-223	ENST00000561071	EDEM1	Q92611	657 aa		10.23	□□□□□ -0.77
MARK3-223	ENST00000561071	CCDC87	Q9NVE4	849 aa		10.23	□□□□□ -0.77
MARK3-223	ENST00000561071	RTCB	Q9Y3I0	505 aa	Known RBP	10.23	□□□□□ -0.77
MARK3-223	ENST00000561071	KNDC1	Q76NI1	1749 aa		10.23	□□□□□ -0.77
MARK3-223	ENST00000561071	SPATA31A3	Q5VYP0	1347 aa		10.23	□□□□□ -0.77
MARK3-223	ENST00000561071	FMN2	Q9NZ56	1722 aa		10.22	□□□□□ -0.77
MARK3-223	ENST00000561071	FZD6	O60353	706 aa		10.22	□□□□□ -0.77
MARK3-223	ENST00000561071	DNM1	Q05193	864 aa	Known RBP	10.22	□□□□□ -0.77
MARK3-223	ENST00000561071	ALKBH2	Q6NS38	261 aa		10.22	□□□□□ -0.77
MARK3-223	ENST00000561071	SND1	Q7KZF4	910 aa	Known RBP eCLIP	10.22	□□□□□ -0.77
MARK3-223	ENST00000561071	CMTR1	Q8N1G2	835 aa	Known RBP	10.22	□□□□□ -0.77
MARK3-223	ENST00000561071	COL25A1	Q9BXS0	654 aa	Predicted RBP	10.22	□□□□□ -0.77
MARK3-223	ENST00000561071	MARK1	Q9P0L2	795 aa		10.22	□□□□□ -0.77
MARK3-223	ENST00000561071	TRPC5	Q9UL62	973 aa	Predicted RBP	10.22	□□□□□ -0.77
MARK3-223	ENST00000561071	KCNH4	Q9UQ05	1017 aa		10.22	□□□□□ -0.77
MARK3-223	ENST00000561071	CDK12	Q9NYV4	1490 aa	Predicted RBP	10.22	□□□□□ -0.77
MARK3-223	ENST00000561071	RGPD8	O14715	1765 aa	Predicted RBP	10.21	□□□□□ -0.77
MARK3-223	ENST00000561071	WFS1	O76024	890 aa		10.21	□□□□□ -0.77
MARK3-223	ENST00000561071	KCNQ4	P56696	695 aa		10.21	□□□□□ -0.77
MARK3-223	ENST00000561071	POLI	Q9UNA4	740 aa		10.21	□□□□□ -0.77
MARK3-223	ENST00000561071	COL22A1	Q8NFW1	1626 aa	Predicted RBP	10.21	□□□□□ -0.78
MARK3-223	ENST00000561071	ADGRB1	O14514	1584 aa		10.2	□□□□□ -0.78
MARK3-223	ENST00000561071	EPB42	P16452	691 aa		10.2	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms