RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 NOM1Q5C9Z4 860 aaKnown RBP13.59□□□□□ -0.23
TPM1-227ENST00000560970 ARMC9Q7Z3E5 817 aa13.59□□□□□ -0.23
TPM1-227ENST00000560970 ZNF296Q8WUU4 475 aaPredicted RBP13.59□□□□□ -0.23
TPM1-227ENST00000560970 ZBED3Q96IU2 234 aaPredicted RBP13.59□□□□□ -0.23
TPM1-227ENST00000560970 F6X3S4 739 aa13.58□□□□□ -0.24
TPM1-227ENST00000560970 MKRN3Q13064 507 aaKnown RBP13.58□□□□□ -0.24
TPM1-227ENST00000560970 PKN2Q16513 984 aaKnown RBP13.58□□□□□ -0.24
TPM1-227ENST00000560970 C15orf52Q6ZUT6 534 aaKnown RBP13.58□□□□□ -0.24
TPM1-227ENST00000560970 ZNF804AQ7Z570 1209 aa13.58□□□□□ -0.24
TPM1-227ENST00000560970 MRPL50Q8N5N7 158 aaKnown RBP13.58□□□□□ -0.24
TPM1-227ENST00000560970 SSH1Q8WYL5 1049 aa13.58□□□□□ -0.24
TPM1-227ENST00000560970 CD209Q9NNX6 404 aa13.58□□□□□ -0.24
TPM1-227ENST00000560970 HPS5Q9UPZ3 1129 aa13.58□□□□□ -0.24
TPM1-227ENST00000560970 PPP2R3BQ9Y5P8 575 aa13.58□□□□□ -0.24
TPM1-227ENST00000560970 ZBED9Q6R2W3 1325 aa13.58□□□□□ -0.24
TPM1-227ENST00000560970 DOCK2Q92608 1830 aa13.57□□□□□ -0.24
TPM1-227ENST00000560970 TBC1D8O95759 1140 aa13.57□□□□□ -0.24
TPM1-227ENST00000560970 TM4SF4P48230 202 aa13.57□□□□□ -0.24
TPM1-227ENST00000560970 IFIT5Q13325 482 aaKnown RBP13.57□□□□□ -0.24
TPM1-227ENST00000560970 CFHR5Q9BXR6 569 aa13.57□□□□□ -0.24
TPM1-227ENST00000560970 ANGEL1Q9UNK9 670 aaKnown RBP13.57□□□□□ -0.24
TPM1-227ENST00000560970 CHMP3Q9Y3E7 222 aa13.57□□□□□ -0.24
TPM1-227ENST00000560970 CENPFP49454 3210 aa13.56□□□□□ -0.24
TPM1-227ENST00000560970 MYO1BO43795 1136 aa13.56□□□□□ -0.24
TPM1-227ENST00000560970 FKBP1AP62942 108 aaKnown RBP13.56□□□□□ -0.24
TPM1-227ENST00000560970 PTPN12Q05209 780 aaKnown RBP13.56□□□□□ -0.24
TPM1-227ENST00000560970 PRKG1Q13976 671 aa13.56□□□□□ -0.24
TPM1-227ENST00000560970 DLGAP5Q15398 846 aa13.56□□□□□ -0.24
TPM1-227ENST00000560970 CERS5Q8N5B7 392 aa13.56□□□□□ -0.24
TPM1-227ENST00000560970 MTMR14Q8NCE2 650 aa13.56□□□□□ -0.24
TPM1-227ENST00000560970 ZSWIM8A7E2V4 1837 aa13.55□□□□□ -0.24
TPM1-227ENST00000560970 GPR25O00155 361 aa13.55□□□□□ -0.24
TPM1-227ENST00000560970 TAF5LO75529 589 aa13.55□□□□□ -0.24
TPM1-227ENST00000560970 IL1R1P14778 569 aa13.55□□□□□ -0.24
TPM1-227ENST00000560970 FOXO4P98177 505 aa13.55□□□□□ -0.24
TPM1-227ENST00000560970 LDLRAD1Q5T700 205 aa13.55□□□□□ -0.24
TPM1-227ENST00000560970 SPRYD7Q5W111 196 aa13.55□□□□□ -0.24
TPM1-227ENST00000560970 DEFB129Q9H1M3 183 aa13.55□□□□□ -0.24
TPM1-227ENST00000560970 SPDYE2BA6NHP3 402 aa13.54□□□□□ -0.24
TPM1-227ENST00000560970 MANSC4A6NHS7 340 aaPredicted RBP13.54□□□□□ -0.24
TPM1-227ENST00000560970 GRM8O00222 908 aa13.54□□□□□ -0.24
TPM1-227ENST00000560970 ALDH1A1P00352 501 aa13.54□□□□□ -0.24
TPM1-227ENST00000560970 SPDYE6P0CI01 402 aa13.54□□□□□ -0.24
TPM1-227ENST00000560970 ZBTB48P10074 688 aaPredicted RBP13.54□□□□□ -0.24
TPM1-227ENST00000560970 MAP3K11Q16584 847 aa13.54□□□□□ -0.24
TPM1-227ENST00000560970 TAF7LQ5H9L4 462 aa13.54□□□□□ -0.24
TPM1-227ENST00000560970 BEND3Q5T5X7 828 aa13.54□□□□□ -0.24
TPM1-227ENST00000560970 FBXO46Q6PJ61 603 aaPredicted RBP13.54□□□□□ -0.24
TPM1-227ENST00000560970 CLRN2A0PK11 232 aa13.53□□□□□ -0.24
TPM1-227ENST00000560970 F8W031 263 aaPredicted RBP13.53□□□□□ -0.24
TPM1-227ENST00000560970 SNAP23O00161 211 aa13.53□□□□□ -0.24
TPM1-227ENST00000560970 FKTNO75072 461 aa13.53□□□□□ -0.24
TPM1-227ENST00000560970 CT47B1P0C2W7 299 aaPredicted RBP13.53□□□□□ -0.24
TPM1-227ENST00000560970 CCDC57Q2TAC2 916 aa13.53□□□□□ -0.24
TPM1-227ENST00000560970 ALDH1L2Q3SY69 923 aa13.53□□□□□ -0.24
TPM1-227ENST00000560970 CFAP100Q494V2 611 aa13.53□□□□□ -0.24
TPM1-227ENST00000560970 HELBQ8NG08 1087 aaPredicted RBP13.53□□□□□ -0.24
TPM1-227ENST00000560970 WNK4Q96J92 1243 aa13.53□□□□□ -0.24
TPM1-227ENST00000560970 SMC4Q9NTJ3 1288 aa13.53□□□□□ -0.24
TPM1-227ENST00000560970 FZD1Q9UP38 647 aa13.53□□□□□ -0.24
TPM1-227ENST00000560970 BRCA2P51587 3418 aa13.53□□□□□ -0.24
TPM1-227ENST00000560970 PPP1R12BO60237 982 aaPredicted RBP13.52□□□□□ -0.25
TPM1-227ENST00000560970 RARSP54136 660 aaKnown RBP13.52□□□□□ -0.25
TPM1-227ENST00000560970 PRPF38BQ5VTL8 546 aaKnown RBP13.52□□□□□ -0.25
TPM1-227ENST00000560970 LMBR1LQ6UX01 489 aa13.52□□□□□ -0.25
TPM1-227ENST00000560970 VEZTQ9HBM0 779 aa13.52□□□□□ -0.25
TPM1-227ENST00000560970 CNNM1Q9NRU3 951 aa13.52□□□□□ -0.25
TPM1-227ENST00000560970 JAG2Q9Y219 1238 aa13.52□□□□□ -0.25
TPM1-227ENST00000560970 PCDHAC2Q9Y5I4 1007 aa13.52□□□□□ -0.25
TPM1-227ENST00000560970 AK9Q5TCS8 1911 aa13.52□□□□□ -0.25
TPM1-227ENST00000560970 PTPRCP08575 1304 aa13.51□□□□□ -0.25
TPM1-227ENST00000560970 AOX1Q06278 1338 aa13.51□□□□□ -0.25
TPM1-227ENST00000560970 FAM205AQ6ZU69 1335 aa13.51□□□□□ -0.25
TPM1-227ENST00000560970 UNCXA6NJT0 531 aa13.51□□□□□ -0.25
TPM1-227ENST00000560970 TNFAIP1Q13829 316 aa13.51□□□□□ -0.25
TPM1-227ENST00000560970 EPHA10Q5JZY3 1008 aa13.51□□□□□ -0.25
TPM1-227ENST00000560970 LDHAL6AQ6ZMR3 332 aa13.51□□□□□ -0.25
TPM1-227ENST00000560970 PIAS4Q8N2W9 510 aaPredicted RBP13.51□□□□□ -0.25
TPM1-227ENST00000560970 ZNF594Q96JF6 807 aaPredicted RBP13.51□□□□□ -0.25
TPM1-227ENST00000560970 CLMNQ96JQ2 1002 aa13.51□□□□□ -0.25
TPM1-227ENST00000560970 MGAMO43451 1857 aa13.5□□□□□ -0.25
TPM1-227ENST00000560970 ALDH1L1O75891 902 aa13.5□□□□□ -0.25
TPM1-227ENST00000560970 IREB2P48200 963 aaKnown RBP13.5□□□□□ -0.25
TPM1-227ENST00000560970 INHBEP58166 350 aa13.5□□□□□ -0.25
TPM1-227ENST00000560970 SUPT20HL1Q3ZLR7 823 aa13.5□□□□□ -0.25
TPM1-227ENST00000560970 MFSD14BQ5SR56 506 aa13.5□□□□□ -0.25
TPM1-227ENST00000560970 IFNL1Q8IU54 200 aa13.5□□□□□ -0.25
TPM1-227ENST00000560970 C9orf78Q9NZ63 289 aaPredicted RBP13.5□□□□□ -0.25
TPM1-227ENST00000560970 PTPRFP10586 1907 aa13.49□□□□□ -0.25
TPM1-227ENST00000560970 IGF2BP3O00425 579 aaKnown RBP eCLIP13.49□□□□□ -0.25
TPM1-227ENST00000560970 RBM5P52756 815 aaKnown RBP eCLIP13.49□□□□□ -0.25
TPM1-227ENST00000560970 SPDYE2Q495Y8 402 aa13.49□□□□□ -0.25
TPM1-227ENST00000560970 SLC4A10Q6U841 1118 aa13.49□□□□□ -0.25
TPM1-227ENST00000560970 SLC10A4Q96EP9 437 aa13.49□□□□□ -0.25
TPM1-227ENST00000560970 PRMT6Q96LA8 375 aaPredicted RBP13.49□□□□□ -0.25
TPM1-227ENST00000560970 SRCIN1Q9C0H9 1055 aa13.49□□□□□ -0.25
TPM1-227ENST00000560970 R3HDMLQ9H3Y0 253 aa13.49□□□□□ -0.25
TPM1-227ENST00000560970 MKI67P46013 3256 aaKnown RBP13.49□□□□□ -0.25
TPM1-227ENST00000560970 MYH2Q9UKX2 1941 aa13.49□□□□□ -0.25
TPM1-227ENST00000560970 DOCK1Q14185 1865 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 1927.8 ms