RNA–Protein interactions for RNA: ENST00000560615.5

TPM1-224, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-224ENST00000560615 UBE4AQ14139 1066 aa23.36■■□□□ 1.33
TPM1-224ENST00000560615 ZNF594Q96JF6 807 aaPredicted RBP23.36■■□□□ 1.33
TPM1-224ENST00000560615 SNAP23O00161 211 aa23.35■■□□□ 1.33
TPM1-224ENST00000560615 PPP1R12BO60237 982 aaPredicted RBP23.35■■□□□ 1.33
TPM1-224ENST00000560615 RBM5P52756 815 aaKnown RBP eCLIP23.35■■□□□ 1.33
TPM1-224ENST00000560615 SUPT20HL1Q3ZLR7 823 aa23.35■■□□□ 1.33
TPM1-224ENST00000560615 EPHA10Q5JZY3 1008 aa23.35■■□□□ 1.33
TPM1-224ENST00000560615 DEFB129Q9H1M3 183 aa23.35■■□□□ 1.33
TPM1-224ENST00000560615 IRS2Q9Y4H2 1338 aa23.34■■□□□ 1.33
TPM1-224ENST00000560615 F8W031 263 aaPredicted RBP23.34■■□□□ 1.33
TPM1-224ENST00000560615 TM4SF4P48230 202 aa23.34■■□□□ 1.33
TPM1-224ENST00000560615 CTU1Q7Z7A3 348 aaKnown RBP23.34■■□□□ 1.33
TPM1-224ENST00000560615 ANGEL1Q9UNK9 670 aaKnown RBP23.34■■□□□ 1.33
TPM1-224ENST00000560615 MROH5Q6ZUA9 1318 aa23.33■■□□□ 1.33
TPM1-224ENST00000560615 HIBADHP31937 336 aaKnown RBP23.33■■□□□ 1.33
TPM1-224ENST00000560615 PRKG1Q13976 671 aa23.33■■□□□ 1.33
TPM1-224ENST00000560615 CFAP100Q494V2 611 aa23.33■■□□□ 1.33
TPM1-224ENST00000560615 CERS5Q8N5B7 392 aa23.33■■□□□ 1.33
TPM1-224ENST00000560615 PTPRCP08575 1304 aa23.33■■□□□ 1.32
TPM1-224ENST00000560615 UNCXA6NJT0 531 aa23.32■■□□□ 1.32
TPM1-224ENST00000560615 E9PSI1 815 aa23.32■■□□□ 1.32
TPM1-224ENST00000560615 PTPN12Q05209 780 aaKnown RBP23.32■■□□□ 1.32
TPM1-224ENST00000560615 TNFAIP1Q13829 316 aa23.32■■□□□ 1.32
TPM1-224ENST00000560615 PKN2Q16513 984 aaKnown RBP23.32■■□□□ 1.32
TPM1-224ENST00000560615 VPS37DQ86XT2 251 aa23.32■■□□□ 1.32
TPM1-224ENST00000560615 SLC10A4Q96EP9 437 aa23.32■■□□□ 1.32
TPM1-224ENST00000560615 CASP8AP2Q9UKL3 1982 aa23.32■■□□□ 1.32
TPM1-224ENST00000560615 SPDYE2BA6NHP3 402 aa23.31■■□□□ 1.32
TPM1-224ENST00000560615 ALDH1A1P00352 501 aa23.31■■□□□ 1.32
TPM1-224ENST00000560615 SPDYE6P0CI01 402 aa23.31■■□□□ 1.32
TPM1-224ENST00000560615 INHBEP58166 350 aa23.31■■□□□ 1.32
TPM1-224ENST00000560615 LDLRAD1Q5T700 205 aa23.31■■□□□ 1.32
TPM1-224ENST00000560615 SUCLG2Q96I99 432 aa23.31■■□□□ 1.32
TPM1-224ENST00000560615 VEZTQ9HBM0 779 aa23.31■■□□□ 1.32
TPM1-224ENST00000560615 FAM205AQ6ZU69 1335 aa23.31■■□□□ 1.32
TPM1-224ENST00000560615 TDRD7Q8NHU6 1098 aaKnown RBP23.3■■□□□ 1.32
TPM1-224ENST00000560615 UTYO14607 1347 aa23.3■■□□□ 1.32
TPM1-224ENST00000560615 NBPF7P0C2Y1 421 aaPredicted RBP23.29■■□□□ 1.32
TPM1-224ENST00000560615 MKRN3Q13064 507 aaKnown RBP23.29■■□□□ 1.32
TPM1-224ENST00000560615 MAP3K11Q16584 847 aa23.29■■□□□ 1.32
TPM1-224ENST00000560615 CAVIN4Q5BKX8 364 aa23.29■■□□□ 1.32
TPM1-224ENST00000560615 NOM1Q5C9Z4 860 aaKnown RBP23.29■■□□□ 1.32
TPM1-224ENST00000560615 MFSD14BQ5SR56 506 aa23.29■■□□□ 1.32
TPM1-224ENST00000560615 ZNF521Q96K83 1311 aa23.29■■□□□ 1.32
TPM1-224ENST00000560615 AKAP11Q9UKA4 1901 aa23.28■■□□□ 1.32
TPM1-224ENST00000560615 MANSC4A6NHS7 340 aaPredicted RBP23.28■■□□□ 1.32
TPM1-224ENST00000560615 FRAT2O75474 233 aaPredicted RBP23.28■■□□□ 1.32
TPM1-224ENST00000560615 TBC1D8O95759 1140 aa23.28■■□□□ 1.32
TPM1-224ENST00000560615 IREB2P48200 963 aaKnown RBP23.28■■□□□ 1.32
TPM1-224ENST00000560615 SPRYD7Q5W111 196 aa23.28■■□□□ 1.32
TPM1-224ENST00000560615 MRPL50Q8N5N7 158 aaKnown RBP23.28■■□□□ 1.32
TPM1-224ENST00000560615 PRMT6Q96LA8 375 aaPredicted RBP23.28■■□□□ 1.32
TPM1-224ENST00000560615 SERPINA10Q9UK55 444 aa23.28■■□□□ 1.32
TPM1-224ENST00000560615 JAG2Q9Y219 1238 aa23.28■■□□□ 1.32
TPM1-224ENST00000560615 CLRN2A0PK11 232 aa23.27■■□□□ 1.32
TPM1-224ENST00000560615 ZBTB48P10074 688 aaPredicted RBP23.27■■□□□ 1.32
TPM1-224ENST00000560615 GYG1P46976 350 aa23.27■■□□□ 1.32
TPM1-224ENST00000560615 FAM84BQ96KN1 310 aaPredicted RBP23.27■■□□□ 1.32
TPM1-224ENST00000560615 BICC1Q9H694 974 aaKnown RBP23.27■■□□□ 1.32
TPM1-224ENST00000560615 TTF2Q9UNY4 1162 aaKnown RBP23.27■■□□□ 1.32
TPM1-224ENST00000560615 RABL6Q3YEC7 729 aaPredicted RBP23.26■■□□□ 1.31
TPM1-224ENST00000560615 METTL24Q5JXM2 366 aa23.26■■□□□ 1.31
TPM1-224ENST00000560615 TBC1D22AQ8WUA7 517 aa23.26■■□□□ 1.31
TPM1-224ENST00000560615 ZNF296Q8WUU4 475 aaPredicted RBP23.26■■□□□ 1.31
TPM1-224ENST00000560615 RIPOR2Q9Y4F9 1068 aa23.26■■□□□ 1.31
TPM1-224ENST00000560615 GPR25O00155 361 aa23.25■■□□□ 1.31
TPM1-224ENST00000560615 TNNI2P48788 182 aa23.25■■□□□ 1.31
TPM1-224ENST00000560615 OTUD7BQ6GQQ9 843 aa23.25■■□□□ 1.31
TPM1-224ENST00000560615 CFHR5Q9BXR6 569 aa23.25■■□□□ 1.31
TPM1-224ENST00000560615 PUS3Q9BZE2 481 aaKnown RBP23.25■■□□□ 1.31
TPM1-224ENST00000560615 RASA3Q14644 834 aa23.24■■□□□ 1.31
TPM1-224ENST00000560615 KAZALD1Q96I82 304 aa23.24■■□□□ 1.31
TPM1-224ENST00000560615 ZNF646O15015 1829 aaPredicted RBP23.24■■□□□ 1.31
TPM1-224ENST00000560615 FKTNO75072 461 aa23.23■■□□□ 1.31
TPM1-224ENST00000560615 PDE8BO95263 885 aa23.23■■□□□ 1.31
TPM1-224ENST00000560615 ALDH1L2Q3SY69 923 aa23.23■■□□□ 1.31
TPM1-224ENST00000560615 ANKRD13AQ8IZ07 590 aa23.23■■□□□ 1.31
TPM1-224ENST00000560615 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.23■■□□□ 1.31
TPM1-224ENST00000560615 SPDYE2Q495Y8 402 aa23.22■■□□□ 1.31
TPM1-224ENST00000560615 ZNF70Q9UC06 446 aaPredicted RBP23.22■■□□□ 1.31
TPM1-224ENST00000560615 HDAC5Q9UQL6 1122 aa23.22■■□□□ 1.31
TPM1-224ENST00000560615 PCDHAC2Q9Y5I4 1007 aa23.22■■□□□ 1.31
TPM1-224ENST00000560615 IFIT1P09914 478 aaKnown RBP23.21■■□□□ 1.31
TPM1-224ENST00000560615 HDLBPQ00341 1268 aaKnown RBP23.21■■□□□ 1.31
TPM1-224ENST00000560615 NBPF12Q5TAG4 269 aaPredicted RBP23.21■■□□□ 1.31
TPM1-224ENST00000560615 FBXO33Q7Z6M2 555 aa23.21■■□□□ 1.31
TPM1-224ENST00000560615 DZIP1LQ8IYY4 767 aaKnown RBP23.21■■□□□ 1.31
TPM1-224ENST00000560615 SSH1Q8WYL5 1049 aa23.21■■□□□ 1.31
TPM1-224ENST00000560615 WNK4Q96J92 1243 aa23.21■■□□□ 1.31
TPM1-224ENST00000560615 CRKP46108 304 aa23.2■■□□□ 1.3
TPM1-224ENST00000560615 SLFN5Q08AF3 891 aa23.2■■□□□ 1.3
TPM1-224ENST00000560615 IFNL1Q8IU54 200 aa23.2■■□□□ 1.3
TPM1-224ENST00000560615 TDRD3Q9H7E2 651 aaKnown RBP23.2■■□□□ 1.3
TPM1-224ENST00000560615 MAST3O60307 1309 aa23.19■■□□□ 1.3
TPM1-224ENST00000560615 CHAF1AQ13111 956 aaPredicted RBP23.19■■□□□ 1.3
TPM1-224ENST00000560615 LRRC24Q50LG9 513 aa23.19■■□□□ 1.3
TPM1-224ENST00000560615 ANKRD44Q8N8A2 993 aa23.19■■□□□ 1.3
TPM1-224ENST00000560615 USP44Q9H0E7 712 aa23.19■■□□□ 1.3
TPM1-224ENST00000560615 SMC4Q9NTJ3 1288 aa23.19■■□□□ 1.3
TPM1-224ENST00000560615 TMOD2Q9NZR1 351 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms