RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 PODNQ7Z5L7 613 aa20.11■□□□□ 0.81
TPM1-219ENST00000559397 UPF2Q9HAU5 1272 aaKnown RBP20.11■□□□□ 0.81
TPM1-219ENST00000559397 GNL3LQ9NVN8 582 aaKnown RBP20.11■□□□□ 0.81
TPM1-219ENST00000559397 IQSEC3Q9UPP2 1182 aaPredicted RBP20.11■□□□□ 0.81
TPM1-219ENST00000559397 MCAMP43121 646 aa20.1■□□□□ 0.81
TPM1-219ENST00000559397 RASGRF1Q13972 1273 aa20.1■□□□□ 0.81
TPM1-219ENST00000559397 TBC1D32Q96NH3 1257 aa20.1■□□□□ 0.81
TPM1-219ENST00000559397 COL1A1P02452 1464 aaPredicted RBP20.1■□□□□ 0.81
TPM1-219ENST00000559397 MYH13Q9UKX3 1938 aa20.1■□□□□ 0.81
TPM1-219ENST00000559397 SCN9AQ15858 1988 aa20.1■□□□□ 0.81
TPM1-219ENST00000559397 YDJCA8MPS7 323 aa20.1■□□□□ 0.81
TPM1-219ENST00000559397 SEMA3EO15041 775 aa20.1■□□□□ 0.81
TPM1-219ENST00000559397 G3V3G9 751 aa20.09■□□□□ 0.81
TPM1-219ENST00000559397 DCAF8Q5TAQ9 597 aa20.09■□□□□ 0.81
TPM1-219ENST00000559397 NIM1KQ8IY84 436 aa20.09■□□□□ 0.81
TPM1-219ENST00000559397 IPO9Q96P70 1041 aaKnown RBP20.09■□□□□ 0.81
TPM1-219ENST00000559397 BOLA2Q9H3K6 86 aa20.09■□□□□ 0.81
TPM1-219ENST00000559397 HMG20BQ9P0W2 317 aa20.09■□□□□ 0.81
TPM1-219ENST00000559397 ZNF646O15015 1829 aaPredicted RBP20.08■□□□□ 0.81
TPM1-219ENST00000559397 ERC2O15083 957 aa20.08■□□□□ 0.81
TPM1-219ENST00000559397 GLRX3O76003 335 aaKnown RBP20.08■□□□□ 0.81
TPM1-219ENST00000559397 PI16Q6UXB8 463 aa20.08■□□□□ 0.81
TPM1-219ENST00000559397 KCNQ5Q9NR82 932 aa20.08■□□□□ 0.81
TPM1-219ENST00000559397 DENND2AQ9ULE3 1009 aa20.08■□□□□ 0.81
TPM1-219ENST00000559397 ZNRF3Q9ULT6 936 aa20.08■□□□□ 0.81
TPM1-219ENST00000559397 PSME4Q14997 1843 aa20.08■□□□□ 0.8
TPM1-219ENST00000559397 EIF5BO60841 1220 aaKnown RBP20.07■□□□□ 0.8
TPM1-219ENST00000559397 SPATA5Q8NB90 893 aa20.07■□□□□ 0.8
TPM1-219ENST00000559397 JDP2Q8WYK2 163 aa20.07■□□□□ 0.8
TPM1-219ENST00000559397 HAUS7Q99871 368 aa20.07■□□□□ 0.8
TPM1-219ENST00000559397 PDS5AQ29RF7 1337 aaKnown RBP20.07■□□□□ 0.8
TPM1-219ENST00000559397 FAM205AQ6ZU69 1335 aa20.07■□□□□ 0.8
TPM1-219ENST00000559397 MFAP1P55081 439 aaKnown RBP20.07■□□□□ 0.8
TPM1-219ENST00000559397 SNRKQ9NRH2 765 aa20.07■□□□□ 0.8
TPM1-219ENST00000559397 NDUFB9Q9Y6M9 179 aa20.07■□□□□ 0.8
TPM1-219ENST00000559397 FZD9O00144 591 aa20.06■□□□□ 0.8
TPM1-219ENST00000559397 FRAT2O75474 233 aaPredicted RBP20.06■□□□□ 0.8
TPM1-219ENST00000559397 ZAP70P43403 619 aa20.06■□□□□ 0.8
TPM1-219ENST00000559397 GTF2IP78347 998 aa20.05■□□□□ 0.8
TPM1-219ENST00000559397 C9orf131Q5VYM1 1079 aa20.05■□□□□ 0.8
TPM1-219ENST00000559397 RNF181Q9P0P0 153 aa20.05■□□□□ 0.8
TPM1-219ENST00000559397 JAG2Q9Y219 1238 aa20.05■□□□□ 0.8
TPM1-219ENST00000559397 CYP2E1P05181 493 aaPredicted RBP20.04■□□□□ 0.8
TPM1-219ENST00000559397 CHAF1AQ13111 956 aaPredicted RBP20.04■□□□□ 0.8
TPM1-219ENST00000559397 TTLL5Q6EMB2 1281 aa20.04■□□□□ 0.8
TPM1-219ENST00000559397 TIAM2Q8IVF5 1701 aa20.04■□□□□ 0.8
TPM1-219ENST00000559397 STRIP1Q5VSL9 837 aa20.03■□□□□ 0.8
TPM1-219ENST00000559397 DDRGK1Q96HY6 314 aa20.03■□□□□ 0.8
TPM1-219ENST00000559397 DNAJC2Q99543 621 aaKnown RBP20.03■□□□□ 0.8
TPM1-219ENST00000559397 C22orf23Q9BZE7 217 aa20.03■□□□□ 0.8
TPM1-219ENST00000559397 USP17L3A6NCW0 530 aa20.03■□□□□ 0.8
TPM1-219ENST00000559397 USP17L4A6NCW7 530 aa20.03■□□□□ 0.8
TPM1-219ENST00000559397 CXCL9Q07325 125 aa20.03■□□□□ 0.8
TPM1-219ENST00000559397 DACT2Q5SW24 774 aa20.03■□□□□ 0.8
TPM1-219ENST00000559397 CASC1Q6TDU7 716 aa20.03■□□□□ 0.8
TPM1-219ENST00000559397 USP17L1Q7RTZ2 530 aa20.03■□□□□ 0.8
TPM1-219ENST00000559397 EDC3Q96F86 508 aaKnown RBP20.03■□□□□ 0.8
TPM1-219ENST00000559397 ANTXR1Q9H6X2 564 aa20.03■□□□□ 0.8
TPM1-219ENST00000559397 SALL1Q9NSC2 1324 aa20.03■□□□□ 0.8
TPM1-219ENST00000559397 DCAF8L1A6NGE4 600 aa20.02■□□□□ 0.8
TPM1-219ENST00000559397 RAD17O75943 681 aa20.02■□□□□ 0.8
TPM1-219ENST00000559397 MAP4K4O95819 1239 aaPredicted RBP20.02■□□□□ 0.8
TPM1-219ENST00000559397 WDR66Q8TBY9 1149 aa20.02■□□□□ 0.8
TPM1-219ENST00000559397 PAG1Q9NWQ8 432 aa20.02■□□□□ 0.8
TPM1-219ENST00000559397 MYO5AQ9Y4I1 1855 aaKnown RBP20.02■□□□□ 0.79
TPM1-219ENST00000559397 GOLIM4O00461 696 aa20.01■□□□□ 0.79
TPM1-219ENST00000559397 RBM25P49756 843 aaKnown RBP20.01■□□□□ 0.79
TPM1-219ENST00000559397 FBXW7Q969H0 707 aa20.01■□□□□ 0.79
TPM1-219ENST00000559397 TRIM6-TRIM34B2RNG4 842 aa20■□□□□ 0.79
TPM1-219ENST00000559397 PSMD14O00487 310 aa20■□□□□ 0.79
TPM1-219ENST00000559397 VIL1P09327 827 aaKnown RBP20■□□□□ 0.79
TPM1-219ENST00000559397 FKBP1AP62942 108 aaKnown RBP20■□□□□ 0.79
TPM1-219ENST00000559397 CERS5Q8N5B7 392 aa20■□□□□ 0.79
TPM1-219ENST00000559397 TBC1D22AQ8WUA7 517 aa20■□□□□ 0.79
TPM1-219ENST00000559397 MXD3Q9BW11 206 aa20■□□□□ 0.79
TPM1-219ENST00000559397 PIH1D3Q9NQM4 214 aaKnown RBP20■□□□□ 0.79
TPM1-219ENST00000559397 DOCK2Q92608 1830 aa20■□□□□ 0.79
TPM1-219ENST00000559397 CHMLP26374 656 aa20■□□□□ 0.79
TPM1-219ENST00000559397 EIF6P56537 245 aaKnown RBP20■□□□□ 0.79
TPM1-219ENST00000559397 MFSD14BQ5SR56 506 aa20■□□□□ 0.79
TPM1-219ENST00000559397 CIAPIN1Q6FI81 312 aa20■□□□□ 0.79
TPM1-219ENST00000559397 RILPL2Q969X0 211 aa20■□□□□ 0.79
TPM1-219ENST00000559397 ZNF541Q9H0D2 1346 aa20■□□□□ 0.79
TPM1-219ENST00000559397 GRIK5Q16478 980 aa19.99■□□□□ 0.79
TPM1-219ENST00000559397 ZC3H4Q9UPT8 1303 aaKnown RBP19.98■□□□□ 0.79
TPM1-219ENST00000559397 TTF1Q15361 905 aaPredicted RBP19.98■□□□□ 0.79
TPM1-219ENST00000559397 RSBN1LQ6PCB5 846 aaPredicted RBP19.98■□□□□ 0.79
TPM1-219ENST00000559397 CNTROBQ8N137 903 aa19.98■□□□□ 0.79
TPM1-219ENST00000559397 ZGPATQ8N5A5 531 aaKnown RBP19.98■□□□□ 0.79
TPM1-219ENST00000559397 EVI5LQ96CN4 794 aa19.98■□□□□ 0.79
TPM1-219ENST00000559397 ABCF2Q9UG63 623 aa19.98■□□□□ 0.79
TPM1-219ENST00000559397 AK9Q5TCS8 1911 aa19.98■□□□□ 0.79
TPM1-219ENST00000559397 TNIP1Q15025 636 aa19.97■□□□□ 0.79
TPM1-219ENST00000559397 KBTBD3Q8NAB2 608 aa19.97■□□□□ 0.79
TPM1-219ENST00000559397 PRDX5P30044 214 aa19.97■□□□□ 0.79
TPM1-219ENST00000559397 GMLQ99445 158 aa19.97■□□□□ 0.79
TPM1-219ENST00000559397 SUGT1Q9Y2Z0 365 aa19.97■□□□□ 0.79
TPM1-219ENST00000559397 MYO3BQ8WXR4 1341 aa19.96■□□□□ 0.79
TPM1-219ENST00000559397 ERICH6Q7L0X2 663 aa19.96■□□□□ 0.79
TPM1-219ENST00000559397 ESYT1Q9BSJ8 1104 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms