RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 SLC34A2O95436 690 aa7.41□□□□□ -1.22
USP3-212ENST00000559276 EXOSC9Q06265 439 aaKnown RBP7.41□□□□□ -1.22
USP3-212ENST00000559276 CHRNDQ07001 517 aa7.41□□□□□ -1.22
USP3-212ENST00000559276 BEND3Q5T5X7 828 aa7.41□□□□□ -1.22
USP3-212ENST00000559276 LDLRAD1Q5T700 205 aa7.41□□□□□ -1.22
USP3-212ENST00000559276 C15orf52Q6ZUT6 534 aaKnown RBP7.41□□□□□ -1.22
USP3-212ENST00000559276 CHMP4AQ9BY43 222 aa7.41□□□□□ -1.22
USP3-212ENST00000559276 R3HDMLQ9H3Y0 253 aa7.41□□□□□ -1.22
USP3-212ENST00000559276 CD209Q9NNX6 404 aa7.41□□□□□ -1.22
USP3-212ENST00000559276 ZBTB47Q9UFB7 747 aaPredicted RBP7.41□□□□□ -1.22
USP3-212ENST00000559276 FZD1Q9UP38 647 aa7.41□□□□□ -1.22
USP3-212ENST00000559276 NPM3O75607 178 aaKnown RBP7.4□□□□□ -1.22
USP3-212ENST00000559276 TBC1D8O95759 1140 aa7.4□□□□□ -1.22
USP3-212ENST00000559276 IGHMBP2P38935 993 aaKnown RBP7.4□□□□□ -1.22
USP3-212ENST00000559276 TM4SF4P48230 202 aa7.4□□□□□ -1.22
USP3-212ENST00000559276 GTF2IP78347 998 aa7.4□□□□□ -1.22
USP3-212ENST00000559276 PTPN12Q05209 780 aaKnown RBP7.4□□□□□ -1.22
USP3-212ENST00000559276 FKBP5Q13451 457 aaPredicted RBP7.4□□□□□ -1.22
USP3-212ENST00000559276 TTLL5Q6EMB2 1281 aa7.4□□□□□ -1.22
USP3-212ENST00000559276 KIAA0825Q8IV33 1275 aa7.4□□□□□ -1.22
USP3-212ENST00000559276 HELBQ8NG08 1087 aaPredicted RBP7.4□□□□□ -1.22
USP3-212ENST00000559276 KAZALD1Q96I82 304 aa7.4□□□□□ -1.22
USP3-212ENST00000559276 ZNF594Q96JF6 807 aaPredicted RBP7.4□□□□□ -1.22
USP3-212ENST00000559276 ANKRD2Q9GZV1 360 aa7.4□□□□□ -1.22
USP3-212ENST00000559276 MYO3BQ8WXR4 1341 aa7.4□□□□□ -1.22
USP3-212ENST00000559276 OTOFQ9HC10 1997 aa7.39□□□□□ -1.23
USP3-212ENST00000559276 ARAP2Q8WZ64 1704 aa7.39□□□□□ -1.23
USP3-212ENST00000559276 IL1R1P14778 569 aa7.39□□□□□ -1.23
USP3-212ENST00000559276 MMP14P50281 582 aa7.39□□□□□ -1.23
USP3-212ENST00000559276 SOX10P56693 466 aa7.39□□□□□ -1.23
USP3-212ENST00000559276 CTU1Q7Z7A3 348 aaKnown RBP7.39□□□□□ -1.23
USP3-212ENST00000559276 WDR63Q8IWG1 891 aa7.39□□□□□ -1.23
USP3-212ENST00000559276 REM2Q8IYK8 340 aaPredicted RBP7.39□□□□□ -1.23
USP3-212ENST00000559276 MTMR14Q8NCE2 650 aa7.39□□□□□ -1.23
USP3-212ENST00000559276 ZNF296Q8WUU4 475 aaPredicted RBP7.39□□□□□ -1.23
USP3-212ENST00000559276 FBXW7Q969H0 707 aa7.39□□□□□ -1.23
USP3-212ENST00000559276 MPHOSPH8Q99549 860 aa7.39□□□□□ -1.23
USP3-212ENST00000559276 MYH16Q9H6N6 1097 aa7.39□□□□□ -1.23
USP3-212ENST00000559276 SALL2Q9Y467 1007 aaPredicted RBP7.39□□□□□ -1.23
USP3-212ENST00000559276 COL1A1P02452 1464 aaPredicted RBP7.38□□□□□ -1.23
USP3-212ENST00000559276 CENPFP49454 3210 aa7.38□□□□□ -1.23
USP3-212ENST00000559276 ANKRD18BA2A2Z9 1011 aa7.38□□□□□ -1.23
USP3-212ENST00000559276 MKRN3Q13064 507 aaKnown RBP7.38□□□□□ -1.23
USP3-212ENST00000559276 PRKG1Q13976 671 aa7.38□□□□□ -1.23
USP3-212ENST00000559276 MAP3K11Q16584 847 aa7.38□□□□□ -1.23
USP3-212ENST00000559276 NOM1Q5C9Z4 860 aaKnown RBP7.38□□□□□ -1.23
USP3-212ENST00000559276 SPRYD7Q5W111 196 aa7.38□□□□□ -1.23
USP3-212ENST00000559276 LMBR1LQ6UX01 489 aa7.38□□□□□ -1.23
USP3-212ENST00000559276 OGFOD1Q8N543 542 aa7.38□□□□□ -1.23
USP3-212ENST00000559276 DDRGK1Q96HY6 314 aa7.38□□□□□ -1.23
USP3-212ENST00000559276 CLMNQ96JQ2 1002 aa7.38□□□□□ -1.23
USP3-212ENST00000559276 PRMT6Q96LA8 375 aaPredicted RBP7.38□□□□□ -1.23
USP3-212ENST00000559276 CFHR5Q9BXR6 569 aa7.38□□□□□ -1.23
USP3-212ENST00000559276 DEFB129Q9H1M3 183 aa7.38□□□□□ -1.23
USP3-212ENST00000559276 HPS5Q9UPZ3 1129 aa7.38□□□□□ -1.23
USP3-212ENST00000559276 JAG2Q9Y219 1238 aa7.38□□□□□ -1.23
USP3-212ENST00000559276 BRCA2P51587 3418 aa7.37□□□□□ -1.23
USP3-212ENST00000559276 ZNF521Q96K83 1311 aa7.37□□□□□ -1.23
USP3-212ENST00000559276 SPDYE2BA6NHP3 402 aa7.37□□□□□ -1.23
USP3-212ENST00000559276 GPR25O00155 361 aa7.37□□□□□ -1.23
USP3-212ENST00000559276 GRM8O00222 908 aa7.37□□□□□ -1.23
USP3-212ENST00000559276 SPDYE6P0CI01 402 aa7.37□□□□□ -1.23
USP3-212ENST00000559276 GJA5P36382 358 aa7.37□□□□□ -1.23
USP3-212ENST00000559276 RRP1P56182 461 aaKnown RBP7.37□□□□□ -1.23
USP3-212ENST00000559276 CAP1Q01518 475 aa7.37□□□□□ -1.23
USP3-212ENST00000559276 IFIT5Q13325 482 aaKnown RBP7.37□□□□□ -1.23
USP3-212ENST00000559276 GRIK5Q16478 980 aa7.37□□□□□ -1.23
USP3-212ENST00000559276 APOBEC3FQ8IUX4 373 aaKnown RBP7.37□□□□□ -1.23
USP3-212ENST00000559276 PUS3Q9BZE2 481 aaKnown RBP7.37□□□□□ -1.23
USP3-212ENST00000559276 ANGEL1Q9UNK9 670 aaKnown RBP7.37□□□□□ -1.23
USP3-212ENST00000559276 MKI67P46013 3256 aaKnown RBP7.37□□□□□ -1.23
USP3-212ENST00000559276 UTYO14607 1347 aa7.36□□□□□ -1.23
USP3-212ENST00000559276 FAM205AQ6ZU69 1335 aa7.36□□□□□ -1.23
USP3-212ENST00000559276 CLRN2A0PK11 232 aa7.36□□□□□ -1.23
USP3-212ENST00000559276 F8W031 263 aaPredicted RBP7.36□□□□□ -1.23
USP3-212ENST00000559276 IGF2BP3O00425 579 aaKnown RBP eCLIP7.36□□□□□ -1.23
USP3-212ENST00000559276 NBPF7P0C2Y1 421 aaPredicted RBP7.36□□□□□ -1.23
USP3-212ENST00000559276 KCNJ4P48050 445 aa7.36□□□□□ -1.23
USP3-212ENST00000559276 FKBP1AP62942 108 aaKnown RBP7.36□□□□□ -1.23
USP3-212ENST00000559276 TTLL12Q14166 644 aaPredicted RBP7.36□□□□□ -1.23
USP3-212ENST00000559276 DLGAP5Q15398 846 aa7.36□□□□□ -1.23
USP3-212ENST00000559276 CFAP100Q494V2 611 aa7.36□□□□□ -1.23
USP3-212ENST00000559276 NBPF12Q5TAG4 269 aaPredicted RBP7.36□□□□□ -1.23
USP3-212ENST00000559276 CDAN1Q8IWY9 1227 aa7.36□□□□□ -1.23
USP3-212ENST00000559276 TDRD7Q8NHU6 1098 aaKnown RBP7.36□□□□□ -1.23
USP3-212ENST00000559276 SUCLG2Q96I99 432 aa7.36□□□□□ -1.23
USP3-212ENST00000559276 HDAC9Q9UKV0 1011 aa7.36□□□□□ -1.23
USP3-212ENST00000559276 USP2O75604 605 aaPredicted RBP7.35□□□□□ -1.23
USP3-212ENST00000559276 ALDH1L1O75891 902 aa7.35□□□□□ -1.23
USP3-212ENST00000559276 NF2P35240 595 aa7.35□□□□□ -1.23
USP3-212ENST00000559276 GYG1P46976 350 aa7.35□□□□□ -1.23
USP3-212ENST00000559276 RABL6Q3YEC7 729 aaPredicted RBP7.35□□□□□ -1.23
USP3-212ENST00000559276 LDHAL6AQ6ZMR3 332 aa7.35□□□□□ -1.23
USP3-212ENST00000559276 ARMC9Q7Z3E5 817 aa7.35□□□□□ -1.23
USP3-212ENST00000559276 ZNF804AQ7Z570 1209 aa7.35□□□□□ -1.23
USP3-212ENST00000559276 IFNL1Q8IU54 200 aa7.35□□□□□ -1.23
USP3-212ENST00000559276 ANKRD44Q8N8A2 993 aa7.35□□□□□ -1.23
USP3-212ENST00000559276 VGLL2Q8N8G2 317 aa7.35□□□□□ -1.23
USP3-212ENST00000559276 WNK4Q96J92 1243 aa7.35□□□□□ -1.23
USP3-212ENST00000559276 FAM84BQ96KN1 310 aaPredicted RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms