RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 HSPA8P11142 646 aaKnown RBP21.37■■□□□ 1.01
LRRC28-210ENST00000558879 RFX5P48382 616 aaPredicted RBP21.37■■□□□ 1.01
LRRC28-210ENST00000558879 MIER1Q8N108 512 aa21.37■■□□□ 1.01
LRRC28-210ENST00000558879 C2orf69Q8N8R5 385 aa21.37■■□□□ 1.01
LRRC28-210ENST00000558879 API5Q9BZZ5 524 aaKnown RBP21.37■■□□□ 1.01
LRRC28-210ENST00000558879 HDAC9Q9UKV0 1011 aa21.37■■□□□ 1.01
LRRC28-210ENST00000558879 FAM155AB1AL88 458 aaPredicted RBP21.36■■□□□ 1.01
LRRC28-210ENST00000558879 SASH1O94885 1247 aa21.36■■□□□ 1.01
LRRC28-210ENST00000558879 DIEXFQ68CQ4 756 aaKnown RBP21.36■■□□□ 1.01
LRRC28-210ENST00000558879 MTMR14Q8NCE2 650 aa21.36■■□□□ 1.01
LRRC28-210ENST00000558879 TDRD7Q8NHU6 1098 aaKnown RBP21.36■■□□□ 1.01
LRRC28-210ENST00000558879 KLHDC4Q8TBB5 520 aa21.36■■□□□ 1.01
LRRC28-210ENST00000558879 NOGQ13253 232 aa21.35■■□□□ 1.01
LRRC28-210ENST00000558879 RGMBQ6NW40 437 aa21.35■■□□□ 1.01
LRRC28-210ENST00000558879 TNS4Q8IZW8 715 aa21.35■■□□□ 1.01
LRRC28-210ENST00000558879 FAM84BQ96KN1 310 aaPredicted RBP21.35■■□□□ 1.01
LRRC28-210ENST00000558879 GYG1P46976 350 aa21.34■■□□□ 1.01
LRRC28-210ENST00000558879 FKBP1BP68106 108 aa21.34■■□□□ 1.01
LRRC28-210ENST00000558879 ARHGAP45Q92619 1136 aa21.34■■□□□ 1.01
LRRC28-210ENST00000558879 SCAF8Q9UPN6 1271 aaKnown RBP21.34■■□□□ 1.01
LRRC28-210ENST00000558879 PDE8BO95263 885 aa21.33■■□□□ 1.01
LRRC28-210ENST00000558879 UBTFL1P0CB47 393 aaPredicted RBP21.33■■□□□ 1.01
LRRC28-210ENST00000558879 HIBADHP31937 336 aaKnown RBP21.33■■□□□ 1.01
LRRC28-210ENST00000558879 LBX1P52954 281 aa21.33■■□□□ 1.01
LRRC28-210ENST00000558879 PTPN12Q05209 780 aaKnown RBP21.33■■□□□ 1.01
LRRC28-210ENST00000558879 METTL24Q5JXM2 366 aa21.33■■□□□ 1.01
LRRC28-210ENST00000558879 APOBEC3FQ8IUX4 373 aaKnown RBP21.33■■□□□ 1.01
LRRC28-210ENST00000558879 SSC5DA1L4H1 1573 aa21.32■■□□□ 1
LRRC28-210ENST00000558879 SLC10A3P09131 477 aa21.32■■□□□ 1
LRRC28-210ENST00000558879 ZIC5Q96T25 663 aa21.32■■□□□ 1
LRRC28-210ENST00000558879 FGFR2P21802 821 aa21.31■■□□□ 1
LRRC28-210ENST00000558879 INTS3Q68E01 1043 aaKnown RBP21.31■■□□□ 1
LRRC28-210ENST00000558879 FBXO33Q7Z6M2 555 aa21.31■■□□□ 1
LRRC28-210ENST00000558879 JAG2Q9Y219 1238 aa21.31■■□□□ 1
LRRC28-210ENST00000558879 PCDHAC2Q9Y5I4 1007 aa21.31■■□□□ 1
LRRC28-210ENST00000558879 EYA2O00167 538 aa21.3■■□□□ 1
LRRC28-210ENST00000558879 DLGAP5Q15398 846 aa21.3■■□□□ 1
LRRC28-210ENST00000558879 MFSD14BQ5SR56 506 aa21.3■■□□□ 1
LRRC28-210ENST00000558879 CCDC102AQ96A19 550 aa21.3■■□□□ 1
LRRC28-210ENST00000558879 MEIS3Q99687 375 aa21.3■■□□□ 1
LRRC28-210ENST00000558879 SPDYE2BA6NHP3 402 aa21.29■■□□□ 1
LRRC28-210ENST00000558879 CA12O43570 354 aa21.29■■□□□ 1
LRRC28-210ENST00000558879 SPDYE6P0CI01 402 aa21.29■■□□□ 1
LRRC28-210ENST00000558879 CFAP100Q494V2 611 aa21.29■■□□□ 1
LRRC28-210ENST00000558879 PRAMEF18Q5VWM3 479 aa21.29■■□□□ 1
LRRC28-210ENST00000558879 ATG9AQ7Z3C6 839 aa21.29■■□□□ 1
LRRC28-210ENST00000558879 RASAL3Q86YV0 1011 aa21.29■■□□□ 1
LRRC28-210ENST00000558879 BEGAINQ9BUH8 593 aa21.29■■□□□ 1
LRRC28-210ENST00000558879 FBXO3Q9UK99 471 aa21.29■■□□□ 1
LRRC28-210ENST00000558879 LRRFIP2Q9Y608 721 aaKnown RBP21.29■■□□□ 1
LRRC28-210ENST00000558879 F8W031 263 aaPredicted RBP21.28■■□□□ 1
LRRC28-210ENST00000558879 ZNF157P51786 506 aaPredicted RBP21.28■■□□□ 1
LRRC28-210ENST00000558879 PUM3Q15397 648 aaKnown RBP21.28■■□□□ 1
LRRC28-210ENST00000558879 AOX1Q06278 1338 aa21.28■■□□□ 1
LRRC28-210ENST00000558879 MYH2Q9UKX2 1941 aa21.27■■□□□ 1
LRRC28-210ENST00000558879 CIAO1O76071 339 aa21.27■■□□□ 1
LRRC28-210ENST00000558879 TRIM27P14373 513 aa21.27■■□□□ 1
LRRC28-210ENST00000558879 HNRNPUQ00839 825 aaKnown RBP eCLIP21.27■■□□□ 1
LRRC28-210ENST00000558879 BCAR3O75815 825 aa21.26■□□□□ 0.99
LRRC28-210ENST00000558879 CAVIN4Q5BKX8 364 aa21.26■□□□□ 0.99
LRRC28-210ENST00000558879 MOB2Q70IA6 237 aa21.26■□□□□ 0.99
LRRC28-210ENST00000558879 PRMT6Q96LA8 375 aaPredicted RBP21.26■□□□□ 0.99
LRRC28-210ENST00000558879 HDAC5Q9UQL6 1122 aa21.26■□□□□ 0.99
LRRC28-210ENST00000558879 PPP2R3BQ9Y5P8 575 aa21.26■□□□□ 0.99
LRRC28-210ENST00000558879 NF2P35240 595 aa21.25■□□□□ 0.99
LRRC28-210ENST00000558879 ATF7IPQ6VMQ6 1270 aa21.25■□□□□ 0.99
LRRC28-210ENST00000558879 SERPINA10Q9UK55 444 aa21.25■□□□□ 0.99
LRRC28-210ENST00000558879 IQSEC3Q9UPP2 1182 aaPredicted RBP21.25■□□□□ 0.99
LRRC28-210ENST00000558879 TNNQ9UQP3 1299 aa21.25■□□□□ 0.99
LRRC28-210ENST00000558879 IFIT1P09914 478 aaKnown RBP21.24■□□□□ 0.99
LRRC28-210ENST00000558879 KIF23Q02241 960 aaPredicted RBP21.24■□□□□ 0.99
LRRC28-210ENST00000558879 MTX1Q13505 466 aa21.24■□□□□ 0.99
LRRC28-210ENST00000558879 VPS37DQ86XT2 251 aa21.24■□□□□ 0.99
LRRC28-210ENST00000558879 TBC1D22AQ8WUA7 517 aa21.24■□□□□ 0.99
LRRC28-210ENST00000558879 DEFB129Q9H1M3 183 aa21.24■□□□□ 0.99
LRRC28-210ENST00000558879 TSKSQ9UJT2 592 aa21.24■□□□□ 0.99
LRRC28-210ENST00000558879 TTF2Q9UNY4 1162 aaKnown RBP21.24■□□□□ 0.99
LRRC28-210ENST00000558879 ZBED9Q6R2W3 1325 aa21.24■□□□□ 0.99
LRRC28-210ENST00000558879 IPO8O15397 1037 aaKnown RBP21.23■□□□□ 0.99
LRRC28-210ENST00000558879 MYO1BO43795 1136 aa21.23■□□□□ 0.99
LRRC28-210ENST00000558879 GNAI3P08754 354 aa21.23■□□□□ 0.99
LRRC28-210ENST00000558879 BCAMP50895 628 aa21.23■□□□□ 0.99
LRRC28-210ENST00000558879 GRIK5Q16478 980 aa21.23■□□□□ 0.99
LRRC28-210ENST00000558879 LPIN2Q92539 896 aa21.23■□□□□ 0.99
LRRC28-210ENST00000558879 COPRSQ9NQ92 184 aa21.23■□□□□ 0.99
LRRC28-210ENST00000558879 SAGE1Q9NXZ1 904 aa21.23■□□□□ 0.99
LRRC28-210ENST00000558879 CLRN2A0PK11 232 aa21.22■□□□□ 0.99
LRRC28-210ENST00000558879 UBE2Q2LH0YL09 131 aa21.22■□□□□ 0.99
LRRC28-210ENST00000558879 SLC5A1P13866 664 aa21.22■□□□□ 0.99
LRRC28-210ENST00000558879 SPDYE2Q495Y8 402 aa21.22■□□□□ 0.99
LRRC28-210ENST00000558879 SIL1Q9H173 461 aa21.22■□□□□ 0.99
LRRC28-210ENST00000558879 PA2G4Q9UQ80 394 aaKnown RBP21.22■□□□□ 0.99
LRRC28-210ENST00000558879 DOCK2Q92608 1830 aa21.22■□□□□ 0.99
LRRC28-210ENST00000558879 CRKP46108 304 aa21.21■□□□□ 0.99
LRRC28-210ENST00000558879 MAP3K11Q16584 847 aa21.21■□□□□ 0.99
LRRC28-210ENST00000558879 AK9Q5TCS8 1911 aa21.21■□□□□ 0.99
LRRC28-210ENST00000558879 ZBTB22O15209 634 aa21.2■□□□□ 0.98
LRRC28-210ENST00000558879 IL15P40933 162 aaPredicted RBP21.2■□□□□ 0.98
LRRC28-210ENST00000558879 HDLBPQ00341 1268 aaKnown RBP21.2■□□□□ 0.98
LRRC28-210ENST00000558879 CHAF1AQ13111 956 aaPredicted RBP21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms