RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 MYO5AQ9Y4I1 1855 aaKnown RBP21.41■■□□□ 1.02
TPM1-214ENST00000558544 IFIT2P09913 472 aaKnown RBP21.41■■□□□ 1.02
TPM1-214ENST00000558544 GMPSP49915 693 aaPredicted RBP21.41■■□□□ 1.02
TPM1-214ENST00000558544 RSBN1LQ6PCB5 846 aaPredicted RBP21.41■■□□□ 1.02
TPM1-214ENST00000558544 FAM205AQ6ZU69 1335 aa21.41■■□□□ 1.02
TPM1-214ENST00000558544 CCDC158Q5M9N0 1113 aa21.4■■□□□ 1.02
TPM1-214ENST00000558544 TTC39AQ5SRH9 613 aa21.4■■□□□ 1.02
TPM1-214ENST00000558544 ANKRD45Q5TZF3 282 aa21.4■■□□□ 1.02
TPM1-214ENST00000558544 SMC5Q8IY18 1101 aa21.4■■□□□ 1.02
TPM1-214ENST00000558544 L3MBTL3Q96JM7 780 aaPredicted RBP21.4■■□□□ 1.02
TPM1-214ENST00000558544 SCNN1DP51172 638 aa21.39■■□□□ 1.02
TPM1-214ENST00000558544 RASGRF1Q13972 1273 aa21.39■■□□□ 1.02
TPM1-214ENST00000558544 B4GALNT3Q6L9W6 998 aa21.39■■□□□ 1.02
TPM1-214ENST00000558544 ZNF784Q8NCA9 323 aaPredicted RBP21.39■■□□□ 1.02
TPM1-214ENST00000558544 GPBP1L1Q9HC44 474 aaPredicted RBP21.39■■□□□ 1.02
TPM1-214ENST00000558544 NMRK2Q9NPI5 230 aa21.39■■□□□ 1.02
TPM1-214ENST00000558544 ADAMTSL1Q8N6G6 1762 aa21.39■■□□□ 1.01
TPM1-214ENST00000558544 ARID4AP29374 1257 aaPredicted RBP21.38■■□□□ 1.01
TPM1-214ENST00000558544 RRAGCQ9HB90 399 aa21.38■■□□□ 1.01
TPM1-214ENST00000558544 ZBTB47Q9UFB7 747 aaPredicted RBP21.38■■□□□ 1.01
TPM1-214ENST00000558544 DENND2AQ9ULE3 1009 aa21.38■■□□□ 1.01
TPM1-214ENST00000558544 MYO3BQ8WXR4 1341 aa21.38■■□□□ 1.01
TPM1-214ENST00000558544 SEMA3EO15041 775 aa21.37■■□□□ 1.01
TPM1-214ENST00000558544 UQCRFS1P1P0C7P4 283 aa21.37■■□□□ 1.01
TPM1-214ENST00000558544 RPS12P25398 132 aaKnown RBP21.37■■□□□ 1.01
TPM1-214ENST00000558544 MFSD14BQ5SR56 506 aa21.37■■□□□ 1.01
TPM1-214ENST00000558544 CERS5Q8N5B7 392 aa21.37■■□□□ 1.01
TPM1-214ENST00000558544 SHTN1A0MZ66 631 aa21.36■■□□□ 1.01
TPM1-214ENST00000558544 POTECB2RU33 542 aa21.36■■□□□ 1.01
TPM1-214ENST00000558544 LMOD1P29536 600 aaPredicted RBP21.36■■□□□ 1.01
TPM1-214ENST00000558544 MCAMP43121 646 aa21.36■■□□□ 1.01
TPM1-214ENST00000558544 SCARF1Q14162 830 aa21.36■■□□□ 1.01
TPM1-214ENST00000558544 PI16Q6UXB8 463 aa21.36■■□□□ 1.01
TPM1-214ENST00000558544 AGBL3Q8NEM8 1001 aa21.36■■□□□ 1.01
TPM1-214ENST00000558544 GPRC5DQ9NZD1 345 aa21.36■■□□□ 1.01
TPM1-214ENST00000558544 DPF2Q92785 391 aa21.36■■□□□ 1.01
TPM1-214ENST00000558544 GMLQ99445 158 aa21.36■■□□□ 1.01
TPM1-214ENST00000558544 HMG20BQ9P0W2 317 aa21.36■■□□□ 1.01
TPM1-214ENST00000558544 HACL1Q9UJ83 578 aa21.36■■□□□ 1.01
TPM1-214ENST00000558544 DOCK2Q92608 1830 aa21.35■■□□□ 1.01
TPM1-214ENST00000558544 MAST2Q6P0Q8 1798 aa21.35■■□□□ 1.01
TPM1-214ENST00000558544 IQCA1LA6NCM1 817 aa21.35■■□□□ 1.01
TPM1-214ENST00000558544 ZBTB22O15209 634 aa21.35■■□□□ 1.01
TPM1-214ENST00000558544 EPS15P42566 896 aa21.35■■□□□ 1.01
TPM1-214ENST00000558544 FKBP1AP62942 108 aaKnown RBP21.35■■□□□ 1.01
TPM1-214ENST00000558544 KIAA0825Q8IV33 1275 aa21.35■■□□□ 1.01
TPM1-214ENST00000558544 MICALL2Q8IY33 904 aa21.35■■□□□ 1.01
TPM1-214ENST00000558544 C16orf71Q8IYS4 520 aaPredicted RBP21.35■■□□□ 1.01
TPM1-214ENST00000558544 SPATA5Q8NB90 893 aa21.35■■□□□ 1.01
TPM1-214ENST00000558544 WDR66Q8TBY9 1149 aa21.35■■□□□ 1.01
TPM1-214ENST00000558544 TBC1D22AQ8WUA7 517 aa21.35■■□□□ 1.01
TPM1-214ENST00000558544 ZNF512BQ96KM6 892 aaPredicted RBP21.35■■□□□ 1.01
TPM1-214ENST00000558544 CNOT7Q9UIV1 285 aaKnown RBP21.35■■□□□ 1.01
TPM1-214ENST00000558544 PDS5AQ29RF7 1337 aaKnown RBP21.34■■□□□ 1.01
TPM1-214ENST00000558544 ECM29Q5VYK3 1845 aa21.34■■□□□ 1.01
TPM1-214ENST00000558544 F8W031 263 aaPredicted RBP21.34■■□□□ 1.01
TPM1-214ENST00000558544 OTUD7AQ8TE49 926 aaPredicted RBP21.34■■□□□ 1.01
TPM1-214ENST00000558544 LNPKQ9C0E8 428 aa21.34■■□□□ 1.01
TPM1-214ENST00000558544 SNRKQ9NRH2 765 aa21.34■■□□□ 1.01
TPM1-214ENST00000558544 GTF3C3Q9Y5Q9 886 aa21.34■■□□□ 1.01
TPM1-214ENST00000558544 MYH2Q9UKX2 1941 aa21.34■■□□□ 1.01
TPM1-214ENST00000558544 VEGFAP15692 232 aaPredicted RBP21.33■■□□□ 1
TPM1-214ENST00000558544 NUCB1Q02818 461 aa21.33■■□□□ 1
TPM1-214ENST00000558544 GRIK5Q16478 980 aa21.33■■□□□ 1
TPM1-214ENST00000558544 USP17L8P0C7I0 530 aa21.32■■□□□ 1
TPM1-214ENST00000558544 EPHX2P34913 555 aa21.32■■□□□ 1
TPM1-214ENST00000558544 CHD1LQ86WJ1 897 aa21.32■■□□□ 1
TPM1-214ENST00000558544 TAF1DQ9H5J8 278 aaPredicted RBP21.32■■□□□ 1
TPM1-214ENST00000558544 MYH7P12883 1935 aa21.32■■□□□ 1
TPM1-214ENST00000558544 SALL1Q9NSC2 1324 aa21.32■■□□□ 1
TPM1-214ENST00000558544 H7C1D1 291 aa21.31■■□□□ 1
TPM1-214ENST00000558544 ZAP70P43403 619 aa21.31■■□□□ 1
TPM1-214ENST00000558544 TSHZ3Q63HK5 1081 aa21.31■■□□□ 1
TPM1-214ENST00000558544 CCDC136Q96JN2 1154 aa21.31■■□□□ 1
TPM1-214ENST00000558544 NDUFB9Q9Y6M9 179 aa21.31■■□□□ 1
TPM1-214ENST00000558544 PRDX5P30044 214 aa21.3■■□□□ 1
TPM1-214ENST00000558544 ERICH6BQ5W0A0 696 aa21.3■■□□□ 1
TPM1-214ENST00000558544 SAMD7Q7Z3H4 446 aa21.3■■□□□ 1
TPM1-214ENST00000558544 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.3■■□□□ 1
TPM1-214ENST00000558544 GPATCH3Q96I76 525 aa21.3■■□□□ 1
TPM1-214ENST00000558544 ADARB2Q9NS39 739 aaKnown RBP21.3■■□□□ 1
TPM1-214ENST00000558544 ECHDC1Q9NTX5 307 aa21.3■■□□□ 1
TPM1-214ENST00000558544 ABCF2Q9UG63 623 aa21.3■■□□□ 1
TPM1-214ENST00000558544 HDAC9Q9UKV0 1011 aa21.3■■□□□ 1
TPM1-214ENST00000558544 TTF2Q9UNY4 1162 aaKnown RBP21.3■■□□□ 1
TPM1-214ENST00000558544 ATP5JP18859 108 aa21.29■■□□□ 1
TPM1-214ENST00000558544 ZNF280AP59817 542 aaPredicted RBP21.29■■□□□ 1
TPM1-214ENST00000558544 TBC1D10BQ4KMP7 808 aaPredicted RBP21.29■■□□□ 1
TPM1-214ENST00000558544 TBC1D9Q6ZT07 1266 aa21.29■■□□□ 1
TPM1-214ENST00000558544 OGFOD1Q8N543 542 aa21.29■■□□□ 1
TPM1-214ENST00000558544 ZGPATQ8N5A5 531 aaKnown RBP21.29■■□□□ 1
TPM1-214ENST00000558544 TRPM4Q8TD43 1214 aa21.29■■□□□ 1
TPM1-214ENST00000558544 SALL3Q9BXA9 1300 aa21.29■■□□□ 1
TPM1-214ENST00000558544 POLR2AP24928 1970 aaKnown RBP21.29■■□□□ 1
TPM1-214ENST00000558544 KIF3CO14782 793 aa21.28■■□□□ 1
TPM1-214ENST00000558544 EGFRP00533 1210 aa21.28■■□□□ 1
TPM1-214ENST00000558544 CYP2E1P05181 493 aaPredicted RBP21.28■■□□□ 1
TPM1-214ENST00000558544 MX1P20591 662 aa21.28■■□□□ 1
TPM1-214ENST00000558544 EAPPQ56P03 285 aaPredicted RBP21.28■■□□□ 1
TPM1-214ENST00000558544 RBM26Q5T8P6 1007 aaKnown RBP21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms