RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 DCPSQ96C86 337 aaKnown RBP12.78□□□□□ -0.36
TPM1-212ENST00000558347 THSD7BQ9C0I4 1608 aa12.78□□□□□ -0.36
TPM1-212ENST00000558347 COL13A1Q5TAT6 717 aaPredicted RBP12.78□□□□□ -0.36
TPM1-212ENST00000558347 ANGEL2Q5VTE6 544 aaKnown RBP12.78□□□□□ -0.36
TPM1-212ENST00000558347 CLUAP1Q96AJ1 413 aa12.78□□□□□ -0.36
TPM1-212ENST00000558347 COG6Q9Y2V7 657 aa12.78□□□□□ -0.36
TPM1-212ENST00000558347 MYO3BQ8WXR4 1341 aa12.77□□□□□ -0.37
TPM1-212ENST00000558347 LRRC24Q50LG9 513 aa12.77□□□□□ -0.37
TPM1-212ENST00000558347 PAXIP1Q6ZW49 1069 aaPredicted RBP12.77□□□□□ -0.37
TPM1-212ENST00000558347 KLHDC4Q8TBB5 520 aa12.77□□□□□ -0.37
TPM1-212ENST00000558347 CAPNS2Q96L46 248 aa12.77□□□□□ -0.37
TPM1-212ENST00000558347 SCAF8Q9UPN6 1271 aaKnown RBP12.77□□□□□ -0.37
TPM1-212ENST00000558347 RIPOR2Q9Y4F9 1068 aa12.77□□□□□ -0.37
TPM1-212ENST00000558347 IL1R1P14778 569 aa12.76□□□□□ -0.37
TPM1-212ENST00000558347 GRM1Q13255 1194 aa12.76□□□□□ -0.37
TPM1-212ENST00000558347 NBPF9Q3BBW0 867 aa12.76□□□□□ -0.37
TPM1-212ENST00000558347 INTS3Q68E01 1043 aaKnown RBP12.76□□□□□ -0.37
TPM1-212ENST00000558347 KIAA0825Q8IV33 1275 aa12.76□□□□□ -0.37
TPM1-212ENST00000558347 CERS5Q8N5B7 392 aa12.76□□□□□ -0.37
TPM1-212ENST00000558347 TMEM57Q8N5G2 664 aa12.76□□□□□ -0.37
TPM1-212ENST00000558347 DDX19BQ9UMR2 479 aa12.76□□□□□ -0.37
TPM1-212ENST00000558347 FOXN1O15353 648 aa12.75□□□□□ -0.37
TPM1-212ENST00000558347 UBE4AQ14139 1066 aa12.75□□□□□ -0.37
TPM1-212ENST00000558347 ZNF804AQ7Z570 1209 aa12.75□□□□□ -0.37
TPM1-212ENST00000558347 SULF1Q8IWU6 871 aa12.75□□□□□ -0.37
TPM1-212ENST00000558347 WBP1LQ9NX94 342 aa12.75□□□□□ -0.37
TPM1-212ENST00000558347 MROH5Q6ZUA9 1318 aa12.74□□□□□ -0.37
TPM1-212ENST00000558347 WNT10BO00744 389 aa12.74□□□□□ -0.37
TPM1-212ENST00000558347 AOC2O75106 756 aa12.74□□□□□ -0.37
TPM1-212ENST00000558347 ECE1P42892 770 aa12.74□□□□□ -0.37
TPM1-212ENST00000558347 RFX5P48382 616 aaPredicted RBP12.74□□□□□ -0.37
TPM1-212ENST00000558347 IFFO2Q5TF58 517 aa12.74□□□□□ -0.37
TPM1-212ENST00000558347 OGFOD1Q8N543 542 aa12.74□□□□□ -0.37
TPM1-212ENST00000558347 CDCA5Q96FF9 252 aa12.74□□□□□ -0.37
TPM1-212ENST00000558347 HHIPL1Q96JK4 782 aa12.74□□□□□ -0.37
TPM1-212ENST00000558347 CHMP4BQ9H444 224 aaKnown RBP12.74□□□□□ -0.37
TPM1-212ENST00000558347 JAG2Q9Y219 1238 aa12.74□□□□□ -0.37
TPM1-212ENST00000558347 PITPNM2Q9BZ72 1349 aa12.74□□□□□ -0.37
TPM1-212ENST00000558347 SASH1O94885 1247 aa12.73□□□□□ -0.37
TPM1-212ENST00000558347 GYG1P46976 350 aa12.73□□□□□ -0.37
TPM1-212ENST00000558347 HUNKP57058 714 aa12.73□□□□□ -0.37
TPM1-212ENST00000558347 METTL24Q5JXM2 366 aa12.73□□□□□ -0.37
TPM1-212ENST00000558347 ITPRIPQ8IWB1 547 aa12.73□□□□□ -0.37
TPM1-212ENST00000558347 VGLL2Q8N8G2 317 aa12.73□□□□□ -0.37
TPM1-212ENST00000558347 GBA2Q9HCG7 927 aaPredicted RBP12.73□□□□□ -0.37
TPM1-212ENST00000558347 UBTFL1P0CB47 393 aaPredicted RBP12.72□□□□□ -0.37
TPM1-212ENST00000558347 PTPN12Q05209 780 aaKnown RBP12.72□□□□□ -0.37
TPM1-212ENST00000558347 ZBED3Q96IU2 234 aaPredicted RBP12.72□□□□□ -0.37
TPM1-212ENST00000558347 FAM84BQ96KN1 310 aaPredicted RBP12.72□□□□□ -0.37
TPM1-212ENST00000558347 HDAC9Q9UKV0 1011 aa12.72□□□□□ -0.37
TPM1-212ENST00000558347 ARAP2Q8WZ64 1704 aa12.72□□□□□ -0.37
TPM1-212ENST00000558347 F8W031 263 aaPredicted RBP12.72□□□□□ -0.37
TPM1-212ENST00000558347 PDE8BO95263 885 aa12.72□□□□□ -0.37
TPM1-212ENST00000558347 HIBADHP31937 336 aaKnown RBP12.72□□□□□ -0.37
TPM1-212ENST00000558347 MMP14P50281 582 aa12.72□□□□□ -0.37
TPM1-212ENST00000558347 PRAMEF18Q5VWM3 479 aa12.72□□□□□ -0.37
TPM1-212ENST00000558347 C2orf69Q8N8R5 385 aa12.72□□□□□ -0.37
TPM1-212ENST00000558347 TDRD7Q8NHU6 1098 aaKnown RBP12.72□□□□□ -0.37
TPM1-212ENST00000558347 AIDAQ96BJ3 306 aa12.72□□□□□ -0.37
TPM1-212ENST00000558347 MEIS3Q99687 375 aa12.72□□□□□ -0.37
TPM1-212ENST00000558347 PCDHAC2Q9Y5I4 1007 aa12.72□□□□□ -0.37
TPM1-212ENST00000558347 LRRFIP2Q9Y608 721 aaKnown RBP12.72□□□□□ -0.37
TPM1-212ENST00000558347 FAM205AQ6ZU69 1335 aa12.71□□□□□ -0.37
TPM1-212ENST00000558347 ZBTB7BO15156 539 aaPredicted RBP12.71□□□□□ -0.38
TPM1-212ENST00000558347 DEKP35659 375 aaKnown RBP12.71□□□□□ -0.38
TPM1-212ENST00000558347 FKBP1AP62942 108 aaKnown RBP12.71□□□□□ -0.38
TPM1-212ENST00000558347 MAP2K1Q02750 393 aaPredicted RBP12.71□□□□□ -0.38
TPM1-212ENST00000558347 ZBTB40Q9NUA8 1239 aa12.71□□□□□ -0.38
TPM1-212ENST00000558347 ECM29Q5VYK3 1845 aa12.7□□□□□ -0.38
TPM1-212ENST00000558347 EYA2O00167 538 aa12.7□□□□□ -0.38
TPM1-212ENST00000558347 MAP2K2P36507 400 aa12.7□□□□□ -0.38
TPM1-212ENST00000558347 CTCFP49711 727 aaPredicted RBP12.7□□□□□ -0.38
TPM1-212ENST00000558347 C8orf34Q49A92 452 aa12.7□□□□□ -0.38
TPM1-212ENST00000558347 ATG9AQ7Z3C6 839 aa12.7□□□□□ -0.38
TPM1-212ENST00000558347 FBXO33Q7Z6M2 555 aa12.7□□□□□ -0.38
TPM1-212ENST00000558347 ZIC5Q96T25 663 aa12.7□□□□□ -0.38
TPM1-212ENST00000558347 IQSEC3Q9UPP2 1182 aaPredicted RBP12.7□□□□□ -0.38
TPM1-212ENST00000558347 PAPPA2Q9BXP8 1791 aa12.7□□□□□ -0.38
TPM1-212ENST00000558347 AOX1Q06278 1338 aa12.7□□□□□ -0.38
TPM1-212ENST00000558347 HSPA8P11142 646 aaKnown RBP12.69□□□□□ -0.38
TPM1-212ENST00000558347 FGFR2P21802 821 aa12.69□□□□□ -0.38
TPM1-212ENST00000558347 DLGAP5Q15398 846 aa12.69□□□□□ -0.38
TPM1-212ENST00000558347 MFSD14BQ5SR56 506 aa12.69□□□□□ -0.38
TPM1-212ENST00000558347 RGMBQ6NW40 437 aa12.69□□□□□ -0.38
TPM1-212ENST00000558347 MTMR14Q8NCE2 650 aa12.69□□□□□ -0.38
TPM1-212ENST00000558347 SIL1Q9H173 461 aa12.69□□□□□ -0.38
TPM1-212ENST00000558347 FAM155AB1AL88 458 aaPredicted RBP12.68□□□□□ -0.38
TPM1-212ENST00000558347 BCAMP50895 628 aa12.68□□□□□ -0.38
TPM1-212ENST00000558347 LBX1P52954 281 aa12.68□□□□□ -0.38
TPM1-212ENST00000558347 NBR1Q14596 966 aa12.68□□□□□ -0.38
TPM1-212ENST00000558347 PUM3Q15397 648 aaKnown RBP12.68□□□□□ -0.38
TPM1-212ENST00000558347 CFAP100Q494V2 611 aa12.68□□□□□ -0.38
TPM1-212ENST00000558347 MOB2Q70IA6 237 aa12.68□□□□□ -0.38
TPM1-212ENST00000558347 PRMT6Q96LA8 375 aaPredicted RBP12.68□□□□□ -0.38
TPM1-212ENST00000558347 PA2G4Q9UQ80 394 aaKnown RBP12.68□□□□□ -0.38
TPM1-212ENST00000558347 SPDYE2BA6NHP3 402 aa12.67□□□□□ -0.38
TPM1-212ENST00000558347 SPDYE6P0CI01 402 aa12.67□□□□□ -0.38
TPM1-212ENST00000558347 ZNF157P51786 506 aaPredicted RBP12.67□□□□□ -0.38
TPM1-212ENST00000558347 GRIK5Q16478 980 aa12.67□□□□□ -0.38
TPM1-212ENST00000558347 CAVIN4Q5BKX8 364 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms