RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 SEMA3EO15041 775 aa26.01■■□□□ 1.75
CASC4-204ENST00000557945 ARID4AP29374 1257 aaPredicted RBP26.01■■□□□ 1.75
CASC4-204ENST00000557945 RASGRF1Q13972 1273 aa26.01■■□□□ 1.75
CASC4-204ENST00000557945 STRIP1Q5VSL9 837 aa26.01■■□□□ 1.75
CASC4-204ENST00000557945 OTUD7AQ8TE49 926 aaPredicted RBP26.01■■□□□ 1.75
CASC4-204ENST00000557945 SCN9AQ15858 1988 aa26■■□□□ 1.75
CASC4-204ENST00000557945 FAM205AQ6ZU69 1335 aa25.99■■□□□ 1.75
CASC4-204ENST00000557945 DDNO94850 711 aaPredicted RBP25.99■■□□□ 1.75
CASC4-204ENST00000557945 SCARF1Q14162 830 aa25.99■■□□□ 1.75
CASC4-204ENST00000557945 DACT2Q5SW24 774 aa25.99■■□□□ 1.75
CASC4-204ENST00000557945 GPC2Q8N158 579 aa25.99■■□□□ 1.75
CASC4-204ENST00000557945 MXD3Q9BW11 206 aa25.99■■□□□ 1.75
CASC4-204ENST00000557945 ECHDC1Q9NTX5 307 aa25.99■■□□□ 1.75
CASC4-204ENST00000557945 VIL1P09327 827 aaKnown RBP25.98■■□□□ 1.75
CASC4-204ENST00000557945 MCAMP43121 646 aa25.98■■□□□ 1.75
CASC4-204ENST00000557945 SPATA5Q8NB90 893 aa25.98■■□□□ 1.75
CASC4-204ENST00000557945 ZNF512BQ96KM6 892 aaPredicted RBP25.98■■□□□ 1.75
CASC4-204ENST00000557945 SNRKQ9NRH2 765 aa25.98■■□□□ 1.75
CASC4-204ENST00000557945 HMG20BQ9P0W2 317 aa25.98■■□□□ 1.75
CASC4-204ENST00000557945 ZBTB12Q9Y330 459 aaPredicted RBP25.98■■□□□ 1.75
CASC4-204ENST00000557945 GLTPD2A6NH11 291 aa25.97■■□□□ 1.75
CASC4-204ENST00000557945 MX1P20591 662 aa25.97■■□□□ 1.75
CASC4-204ENST00000557945 TSHZ3Q63HK5 1081 aa25.97■■□□□ 1.75
CASC4-204ENST00000557945 RSBN1LQ6PCB5 846 aaPredicted RBP25.97■■□□□ 1.75
CASC4-204ENST00000557945 PI16Q6UXB8 463 aa25.97■■□□□ 1.75
CASC4-204ENST00000557945 COL1A1P02452 1464 aaPredicted RBP25.97■■□□□ 1.75
CASC4-204ENST00000557945 MFSD14BQ5SR56 506 aa25.96■■□□□ 1.75
CASC4-204ENST00000557945 WDR66Q8TBY9 1149 aa25.96■■□□□ 1.75
CASC4-204ENST00000557945 ZBTB22O15209 634 aa25.95■■□□□ 1.75
CASC4-204ENST00000557945 ATP5JP18859 108 aa25.95■■□□□ 1.75
CASC4-204ENST00000557945 GMPSP49915 693 aaPredicted RBP25.95■■□□□ 1.75
CASC4-204ENST00000557945 TBC1D22AQ8WUA7 517 aa25.95■■□□□ 1.75
CASC4-204ENST00000557945 BOLA2Q9H3K6 86 aa25.95■■□□□ 1.75
CASC4-204ENST00000557945 ZNF526Q8TF50 670 aaPredicted RBP25.95■■□□□ 1.74
CASC4-204ENST00000557945 PDS5AQ29RF7 1337 aaKnown RBP25.94■■□□□ 1.74
CASC4-204ENST00000557945 TTC41PQ6P2S7 1318 aa25.94■■□□□ 1.74
CASC4-204ENST00000557945 MYH13Q9UKX3 1938 aa25.94■■□□□ 1.74
CASC4-204ENST00000557945 ZAP70P43403 619 aa25.94■■□□□ 1.74
CASC4-204ENST00000557945 CERS5Q8N5B7 392 aa25.94■■□□□ 1.74
CASC4-204ENST00000557945 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.94■■□□□ 1.74
CASC4-204ENST00000557945 MYO3BQ8WXR4 1341 aa25.93■■□□□ 1.74
CASC4-204ENST00000557945 SALL3Q9BXA9 1300 aa25.93■■□□□ 1.74
CASC4-204ENST00000557945 ERC2O15083 957 aa25.93■■□□□ 1.74
CASC4-204ENST00000557945 RPS12P25398 132 aaKnown RBP25.93■■□□□ 1.74
CASC4-204ENST00000557945 PDE1AP54750 535 aa25.93■■□□□ 1.74
CASC4-204ENST00000557945 FKBP1AP62942 108 aaKnown RBP25.93■■□□□ 1.74
CASC4-204ENST00000557945 AGBL3Q8NEM8 1001 aa25.93■■□□□ 1.74
CASC4-204ENST00000557945 DNAJC2Q99543 621 aaKnown RBP25.93■■□□□ 1.74
CASC4-204ENST00000557945 ABCF2Q9UG63 623 aa25.93■■□□□ 1.74
CASC4-204ENST00000557945 NDUFB9Q9Y6M9 179 aa25.93■■□□□ 1.74
CASC4-204ENST00000557945 PSME4Q14997 1843 aa25.92■■□□□ 1.74
CASC4-204ENST00000557945 F8W031 263 aaPredicted RBP25.92■■□□□ 1.74
CASC4-204ENST00000557945 YY1P25490 414 aa25.92■■□□□ 1.74
CASC4-204ENST00000557945 PDE4AP27815 886 aa25.92■■□□□ 1.74
CASC4-204ENST00000557945 STAP2Q9UGK3 403 aa25.92■■□□□ 1.74
CASC4-204ENST00000557945 TBC1D9Q6ZT07 1266 aa25.91■■□□□ 1.74
CASC4-204ENST00000557945 KIAA0825Q8IV33 1275 aa25.91■■□□□ 1.74
CASC4-204ENST00000557945 PLEKHM2Q8IWE5 1019 aa25.91■■□□□ 1.74
CASC4-204ENST00000557945 ZGPATQ8N5A5 531 aaKnown RBP25.91■■□□□ 1.74
CASC4-204ENST00000557945 GTF3C3Q9Y5Q9 886 aa25.91■■□□□ 1.74
CASC4-204ENST00000557945 GLRX3O76003 335 aaKnown RBP25.9■■□□□ 1.74
CASC4-204ENST00000557945 LMOD1P29536 600 aaPredicted RBP25.9■■□□□ 1.74
CASC4-204ENST00000557945 GMLQ99445 158 aa25.9■■□□□ 1.74
CASC4-204ENST00000557945 HAUS7Q99871 368 aa25.9■■□□□ 1.74
CASC4-204ENST00000557945 SALL1Q9NSC2 1324 aa25.89■■□□□ 1.74
CASC4-204ENST00000557945 CYP2E1P05181 493 aaPredicted RBP25.89■■□□□ 1.74
CASC4-204ENST00000557945 SCNN1DP51172 638 aa25.89■■□□□ 1.74
CASC4-204ENST00000557945 GRIK5Q16478 980 aa25.89■■□□□ 1.74
CASC4-204ENST00000557945 PI4K2BQ8TCG2 481 aa25.89■■□□□ 1.74
CASC4-204ENST00000557945 DPF2Q92785 391 aa25.89■■□□□ 1.74
CASC4-204ENST00000557945 L3MBTL3Q96JM7 780 aaPredicted RBP25.89■■□□□ 1.74
CASC4-204ENST00000557945 CNOT7Q9UIV1 285 aaKnown RBP25.89■■□□□ 1.74
CASC4-204ENST00000557945 AKAP11Q9UKA4 1901 aa25.88■■□□□ 1.73
CASC4-204ENST00000557945 GOLIM4O00461 696 aa25.88■■□□□ 1.73
CASC4-204ENST00000557945 LDHBP07195 334 aaKnown RBP25.88■■□□□ 1.73
CASC4-204ENST00000557945 USP17L8P0C7I0 530 aa25.88■■□□□ 1.73
CASC4-204ENST00000557945 SPTY2D1Q68D10 685 aaPredicted RBP25.88■■□□□ 1.73
CASC4-204ENST00000557945 MICALL2Q8IY33 904 aa25.88■■□□□ 1.73
CASC4-204ENST00000557945 GPRC5DQ9NZD1 345 aa25.88■■□□□ 1.73
CASC4-204ENST00000557945 LRP2BPQ9P2M1 347 aa25.88■■□□□ 1.73
CASC4-204ENST00000557945 ZNF646O15015 1829 aaPredicted RBP25.87■■□□□ 1.73
CASC4-204ENST00000557945 H7C1D1 291 aa25.87■■□□□ 1.73
CASC4-204ENST00000557945 PRDX5P30044 214 aa25.87■■□□□ 1.73
CASC4-204ENST00000557945 OGFOD1Q8N543 542 aa25.87■■□□□ 1.73
CASC4-204ENST00000557945 EDC3Q96F86 508 aaKnown RBP25.87■■□□□ 1.73
CASC4-204ENST00000557945 ANTXR1Q9H6X2 564 aa25.87■■□□□ 1.73
CASC4-204ENST00000557945 PIH1D3Q9NQM4 214 aaKnown RBP25.87■■□□□ 1.73
CASC4-204ENST00000557945 PAG1Q9NWQ8 432 aa25.87■■□□□ 1.73
CASC4-204ENST00000557945 TTF2Q9UNY4 1162 aaKnown RBP25.87■■□□□ 1.73
CASC4-204ENST00000557945 SUGT1Q9Y2Z0 365 aa25.87■■□□□ 1.73
CASC4-204ENST00000557945 SHTN1A0MZ66 631 aa25.86■■□□□ 1.73
CASC4-204ENST00000557945 ERICH6Q7L0X2 663 aa25.86■■□□□ 1.73
CASC4-204ENST00000557945 SKAP1Q86WV1 359 aa25.86■■□□□ 1.73
CASC4-204ENST00000557945 RAI14Q9P0K7 980 aa25.86■■□□□ 1.73
CASC4-204ENST00000557945 HDAC9Q9UKV0 1011 aa25.86■■□□□ 1.73
CASC4-204ENST00000557945 AOX1Q06278 1338 aa25.86■■□□□ 1.73
CASC4-204ENST00000557945 MAP4K4O95819 1239 aaPredicted RBP25.85■■□□□ 1.73
CASC4-204ENST00000557945 EPS15P42566 896 aa25.85■■□□□ 1.73
CASC4-204ENST00000557945 TTF1Q15361 905 aaPredicted RBP25.85■■□□□ 1.73
CASC4-204ENST00000557945 RRAGCQ9HB90 399 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms